Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220400
Identifier: 183220400
GI number: 183220400
Start: 1040051
End: 1040692
Strand: Direct
Name: 183220400
Synonym: LEPBI_I0996
Alternate gene names: NA
Gene position: 1040051-1040692 (Clockwise)
Preceding gene: 183220399
Following gene: 183220404
Centisome position: 28.89
GC content: 30.69
Gene sequence:
>642_bases ATGAAGTATAAAATGTTCATATTTTTAATTTTAGTTTTCTTTTGTTTTTGCAAAGACAAGGAAATAAACAAAGAAGAAAA CGACGATCCATTTTATATATCAGAAAATAAAGAATGTCTCTTAAATTCAAATATTAAAAAAAACTGCTTGAGTATGAAAA GTGAATTTTCCTGCTTTAAAACTTTAGAAGATTTGAGTCATTCAAAAATTGATAAAATTTTCTTTAATCAAAAATGGATG GGAAATGACCAGCAAACAATCTTCTACCAAGTAGATACAAAGGGAAAAATTAAAATTTATGAAGGAGGCCCCGATGTATT ACTGGAAGAACGAACCTTGGTTGGTTTAGGGAGATTCTTCATTAAAAATAACCAATGGTATTATGAGCAAAGTTGCTTAA AAGAAAATTGCGAAAATTTTGAATTTCAGGTCTTATATATGGACTGCACTTTGACTACGAATTTAAATGAAATGGAAGTA TTGAAATCGATTCAATTCGGAAATCGCAAGTTCATTGAAAGCGACGAAATCGAAAACGACAAAAGTTATAGATTAATTTC ATTTATCCAAGAAAAGCCAGTTCCAAACCAAATTTTCAACGGCTTCACCTCCACCAAGGTCCCACCCATACCTTCTCAGT GA
Upstream 100 bases:
>100_bases CAGGCCAAGATTTCAGAACTGAAGTTACCCAAAAATAACTCAGACTATTTACTGAGGTCAGAATTCTATGAATTAAAACC ACAAGTCGGAGTGAAAAAAG
Downstream 100 bases:
>100_bases AACCTAACCTTGCTTAAACCTTCCAAATGTAGACAAAGTCAGTGCGGTCCGCCCAAGGTAGGGGGAAGTCTAGTTTTTTA AGTTTGATTTCCCCTTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MKYKMFIFLILVFFCFCKDKEINKEENDDPFYISENKECLLNSNIKKNCLSMKSEFSCFKTLEDLSHSKIDKIFFNQKWM GNDQQTIFYQVDTKGKIKIYEGGPDVLLEERTLVGLGRFFIKNNQWYYEQSCLKENCENFEFQVLYMDCTLTTNLNEMEV LKSIQFGNRKFIESDEIENDKSYRLISFIQEKPVPNQIFNGFTSTKVPPIPSQ
Sequences:
>Translated_213_residues MKYKMFIFLILVFFCFCKDKEINKEENDDPFYISENKECLLNSNIKKNCLSMKSEFSCFKTLEDLSHSKIDKIFFNQKWM GNDQQTIFYQVDTKGKIKIYEGGPDVLLEERTLVGLGRFFIKNNQWYYEQSCLKENCENFEFQVLYMDCTLTTNLNEMEV LKSIQFGNRKFIESDEIENDKSYRLISFIQEKPVPNQIFNGFTSTKVPPIPSQ >Mature_213_residues MKYKMFIFLILVFFCFCKDKEINKEENDDPFYISENKECLLNSNIKKNCLSMKSEFSCFKTLEDLSHSKIDKIFFNQKWM GNDQQTIFYQVDTKGKIKIYEGGPDVLLEERTLVGLGRFFIKNNQWYYEQSCLKENCENFEFQVLYMDCTLTTNLNEMEV LKSIQFGNRKFIESDEIENDKSYRLISFIQEKPVPNQIFNGFTSTKVPPIPSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25292; Mature: 25292
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYKMFIFLILVFFCFCKDKEINKEENDDPFYISENKECLLNSNIKKNCLSMKSEFSCFK CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEECCCHHHHHHHHHHHHHHHH TLEDLSHSKIDKIFFNQKWMGNDQQTIFYQVDTKGKIKIYEGGPDVLLEERTLVGLGRFF HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEECHHHHHHHHEE IKNNQWYYEQSCLKENCENFEFQVLYMDCTLTTNLNEMEVLKSIQFGNRKFIESDEIEND EECCCEEEHHHHHHHCCCCCEEEEEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCC KSYRLISFIQEKPVPNQIFNGFTSTKVPPIPSQ CCHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MKYKMFIFLILVFFCFCKDKEINKEENDDPFYISENKECLLNSNIKKNCLSMKSEFSCFK CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEECCCHHHHHHHHHHHHHHHH TLEDLSHSKIDKIFFNQKWMGNDQQTIFYQVDTKGKIKIYEGGPDVLLEERTLVGLGRFF HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEECHHHHHHHHEE IKNNQWYYEQSCLKENCENFEFQVLYMDCTLTTNLNEMEVLKSIQFGNRKFIESDEIEND EECCCEEEHHHHHHHCCCCCEEEEEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCC KSYRLISFIQEKPVPNQIFNGFTSTKVPPIPSQ CCHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA