Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220394
Identifier: 183220394
GI number: 183220394
Start: 1025956
End: 1026480
Strand: Direct
Name: 183220394
Synonym: LEPBI_I0990
Alternate gene names: NA
Gene position: 1025956-1026480 (Clockwise)
Preceding gene: 183220393
Following gene: 183220395
Centisome position: 28.5
GC content: 33.71
Gene sequence:
>525_bases ATGATGAAAATAACCCAATCGGAATTATGGAATGTAATTTGTCTTTTTGGAATTTGTTTTGTTTTGAGTTGCCATAAAGC GGAAATAGATGACCCAAAAGAATACCAAATTGTAAAAAATGCATACCAGTCTGGTCATTTGACAGTCGTCCAAGCGATTT TGATGGATCGCAAAAAAGAAAGAGAGCTTACCACTGAAGAGACCAAATTATACTTTAAGTCTTTATTTTATTTGAGTGAA TGGCGGGAATTTTTCCATGAATGGGATCTTTTGGAAGCAAAACCCAAAGAATTGATCTTCTATTATTTTAAAGCCATTCT ACTTTCAAAAGACAAAAGAGTAGTCAATTTGGCAGAAGAAAATGCTCTTTTAGAATTACTTCCCATATCACCTGAGGCTT GTTTGTTGTATTTACAATGGAATGGCCCAAAATTAAAACCCAACCAAAAAAAAATATTTTTGGCCCAGTTAAAACAGTTC CAAACCTTGATTCATAGAATGGATCAGGAGTTGGAACTAAGGTAA
Upstream 100 bases:
>100_bases GTTTGACTTGGACAGAGTTAAAACTTAGGCAATCAGAACGATTTGATTGGGATTGGATTCCAAACTCTCCGCTTCCGTTT TTACAATCCAAGGAATCATT
Downstream 100 bases:
>100_bases TGAAAATACAATTCGAACAAACAAAGTTTATGGAATCGATTTCAATTGGTTATCATTTGTGGAAAGAATTCAGAACCAAA GATTGGTTTTATCTTTCATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MMKITQSELWNVICLFGICFVLSCHKAEIDDPKEYQIVKNAYQSGHLTVVQAILMDRKKERELTTEETKLYFKSLFYLSE WREFFHEWDLLEAKPKELIFYYFKAILLSKDKRVVNLAEENALLELLPISPEACLLYLQWNGPKLKPNQKKIFLAQLKQF QTLIHRMDQELELR
Sequences:
>Translated_174_residues MMKITQSELWNVICLFGICFVLSCHKAEIDDPKEYQIVKNAYQSGHLTVVQAILMDRKKERELTTEETKLYFKSLFYLSE WREFFHEWDLLEAKPKELIFYYFKAILLSKDKRVVNLAEENALLELLPISPEACLLYLQWNGPKLKPNQKKIFLAQLKQF QTLIHRMDQELELR >Mature_174_residues MMKITQSELWNVICLFGICFVLSCHKAEIDDPKEYQIVKNAYQSGHLTVVQAILMDRKKERELTTEETKLYFKSLFYLSE WREFFHEWDLLEAKPKELIFYYFKAILLSKDKRVVNLAEENALLELLPISPEACLLYLQWNGPKLKPNQKKIFLAQLKQF QTLIHRMDQELELR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20805; Mature: 20805
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKITQSELWNVICLFGICFVLSCHKAEIDDPKEYQIVKNAYQSGHLTVVQAILMDRKKE CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCHHH RELTTEETKLYFKSLFYLSEWREFFHEWDLLEAKPKELIFYYFKAILLSKDKRVVNLAEE HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHEEHHHC NALLELLPISPEACLLYLQWNGPKLKPNQKKIFLAQLKQFQTLIHRMDQELELR CCEEEEECCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCC >Mature Secondary Structure MMKITQSELWNVICLFGICFVLSCHKAEIDDPKEYQIVKNAYQSGHLTVVQAILMDRKKE CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCHHH RELTTEETKLYFKSLFYLSEWREFFHEWDLLEAKPKELIFYYFKAILLSKDKRVVNLAEE HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHEEHHHC NALLELLPISPEACLLYLQWNGPKLKPNQKKIFLAQLKQFQTLIHRMDQELELR CCEEEEECCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA