Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220387
Identifier: 183220387
GI number: 183220387
Start: 1019307
End: 1020527
Strand: Reverse
Name: 183220387
Synonym: LEPBI_I0983
Alternate gene names: NA
Gene position: 1020527-1019307 (Counterclockwise)
Preceding gene: 183220388
Following gene: 183220385
Centisome position: 28.35
GC content: 42.34
Gene sequence:
>1221_bases ATGAAAAAGATCCTTCTTCTCATTTTATTTTTGAGTGTAAGCATTCAATTTTCCGACTTCCACAACCAAACAAGAAAATC CGCCCAAACAATCTTAAAAGAGATGTTGAGTGAATCCATCCAGATTGGATTCGGAACAGAAAAACTTTGGTCCGCAACCA GTGCCGATAACTGGGGTTTTGTGAGACAATCGGCCACTTGGGCGAGAGGAAACTCAGGCATCATCGATAGTTTGATCCTC GCGATTAAAAATGCAGGATACTTCAACAATCCAAGTGAAGCTAGAAGTGACGTCCTTACCAATATCAATCTGAGTGGATT TGGTTCCGCAACACTAACGATTAAAATCAATACACCAACGAATAATATTGCTTCCACAGCTTACACTGGTACCAAAAATT TTAATCATTTTTTTGAGATCAAAAAAACAGGAGCTTCCACTCCTTCCTTACAATTGTTTTTTGATGATCCAAACTCCACT CTTGGAAATGATGGAGCCCTTGTTTACTATAGGCTCGTTGATTTTGGAAACCCTCAATTTGCAAACGTAGGTGATGTGAT CACAGAAAGTTATACGGGTAATGAATCTGTGTATGGAACCAAGTTCCAAACCTACACTTGGCGCAACGGACCAGAAAATG CTTCATGGATCAGTAAACATGGACGTGTGGTTTTAACCGAGGTGGACTCAGGAAGACAACTTTGTTTTCGATCTGTGGTT CGTTTGAGTTTTACAAAATTAAAAGAAATCAATCCCGCGGGAGCAGCAACATTAGACCAATTGAAAACTTTATGCCATAA TGCACAAGGTTCCTCTGGCGATAATATCTATTATGTACTCGCCTATATGCAAAAGTTTGATTCCCCTTTCCTAACAACAG CGAAGGCGACGTTCACCACGGCAGCGACAAAAGCCGAGACCATCTGCAGCTTACCTGCTGCGAGTTTTGCCGGTGCCAAA CTATCGTATGGAATCTTTAATATCAATGGGTATGTGACAGACCAACTCAATGCAGACCAAGTCCCAGCGGATTACCCAAG CCCAACAGTCGGTGGGACTGATTTTATGTCAGTCGATGAAGCCTTCAACAGAACCTACGTGGCACTCAATGACTCCATAG CAGGCCAGCCAACACTCGGCACGGTCAAACAATACGAAGAAACATCGAAGGTTTACTTTGATGCGTTTGACGGTTCCGCA CAGAATCTCTCGTTTAAATGA
Upstream 100 bases:
>100_bases ACTGTTACTCTCGGTTTGGGGTTACAACCAAGCCGCTGGTTGTTCGGGACCCAAATCAGGATTTACCATTTGTATCCCGA AAGGGATTGCGGAGTAGACC
Downstream 100 bases:
>100_bases TACTTCTGAATATGACTCAAGGGAAAAAATGAAACGTTTCCCTTGGGTTTTGGAATCCAAACGATTGTGATAGAGATTAC TTGGATCCGTTATTCGTTGG
Product: putative signal peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MKKILLLILFLSVSIQFSDFHNQTRKSAQTILKEMLSESIQIGFGTEKLWSATSADNWGFVRQSATWARGNSGIIDSLIL AIKNAGYFNNPSEARSDVLTNINLSGFGSATLTIKINTPTNNIASTAYTGTKNFNHFFEIKKTGASTPSLQLFFDDPNST LGNDGALVYYRLVDFGNPQFANVGDVITESYTGNESVYGTKFQTYTWRNGPENASWISKHGRVVLTEVDSGRQLCFRSVV RLSFTKLKEINPAGAATLDQLKTLCHNAQGSSGDNIYYVLAYMQKFDSPFLTTAKATFTTAATKAETICSLPAASFAGAK LSYGIFNINGYVTDQLNADQVPADYPSPTVGGTDFMSVDEAFNRTYVALNDSIAGQPTLGTVKQYEETSKVYFDAFDGSA QNLSFK
Sequences:
>Translated_406_residues MKKILLLILFLSVSIQFSDFHNQTRKSAQTILKEMLSESIQIGFGTEKLWSATSADNWGFVRQSATWARGNSGIIDSLIL AIKNAGYFNNPSEARSDVLTNINLSGFGSATLTIKINTPTNNIASTAYTGTKNFNHFFEIKKTGASTPSLQLFFDDPNST LGNDGALVYYRLVDFGNPQFANVGDVITESYTGNESVYGTKFQTYTWRNGPENASWISKHGRVVLTEVDSGRQLCFRSVV RLSFTKLKEINPAGAATLDQLKTLCHNAQGSSGDNIYYVLAYMQKFDSPFLTTAKATFTTAATKAETICSLPAASFAGAK LSYGIFNINGYVTDQLNADQVPADYPSPTVGGTDFMSVDEAFNRTYVALNDSIAGQPTLGTVKQYEETSKVYFDAFDGSA QNLSFK >Mature_406_residues MKKILLLILFLSVSIQFSDFHNQTRKSAQTILKEMLSESIQIGFGTEKLWSATSADNWGFVRQSATWARGNSGIIDSLIL AIKNAGYFNNPSEARSDVLTNINLSGFGSATLTIKINTPTNNIASTAYTGTKNFNHFFEIKKTGASTPSLQLFFDDPNST LGNDGALVYYRLVDFGNPQFANVGDVITESYTGNESVYGTKFQTYTWRNGPENASWISKHGRVVLTEVDSGRQLCFRSVV RLSFTKLKEINPAGAATLDQLKTLCHNAQGSSGDNIYYVLAYMQKFDSPFLTTAKATFTTAATKAETICSLPAASFAGAK LSYGIFNINGYVTDQLNADQVPADYPSPTVGGTDFMSVDEAFNRTYVALNDSIAGQPTLGTVKQYEETSKVYFDAFDGSA QNLSFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44370; Mature: 44370
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILLLILFLSVSIQFSDFHNQTRKSAQTILKEMLSESIQIGFGTEKLWSATSADNWGF CHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHCCCCCCCCCE VRQSATWARGNSGIIDSLILAIKNAGYFNNPSEARSDVLTNINLSGFGSATLTIKINTPT EECCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEECCC NNIASTAYTGTKNFNHFFEIKKTGASTPSLQLFFDDPNSTLGNDGALVYYRLVDFGNPQF CCCCCCEECCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCCC ANVGDVITESYTGNESVYGTKFQTYTWRNGPENASWISKHGRVVLTEVDSGRQLCFRSVV CCHHHHHHCCCCCCCCEECCEEEEEEECCCCCCCHHHHHCCCEEEEECCCCHHHHHHHHH RLSFTKLKEINPAGAATLDQLKTLCHNAQGSSGDNIYYVLAYMQKFDSPFLTTAKATFTT HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHCCCCEEECHHHHHH AATKAETICSLPAASFAGAKLSYGIFNINGYVTDQLNADQVPADYPSPTVGGTDFMSVDE HHHHHHHHHCCCCCCCCCCEEEEEEEEECEEEECCCCCCCCCCCCCCCCCCCCCCCHHHH AFNRTYVALNDSIAGQPTLGTVKQYEETSKVYFDAFDGSAQNLSFK HHCCEEEEECCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCC >Mature Secondary Structure MKKILLLILFLSVSIQFSDFHNQTRKSAQTILKEMLSESIQIGFGTEKLWSATSADNWGF CHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHCCCCCCCCCE VRQSATWARGNSGIIDSLILAIKNAGYFNNPSEARSDVLTNINLSGFGSATLTIKINTPT EECCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEECCC NNIASTAYTGTKNFNHFFEIKKTGASTPSLQLFFDDPNSTLGNDGALVYYRLVDFGNPQF CCCCCCEECCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCCC ANVGDVITESYTGNESVYGTKFQTYTWRNGPENASWISKHGRVVLTEVDSGRQLCFRSVV CCHHHHHHCCCCCCCCEECCEEEEEEECCCCCCCHHHHHCCCEEEEECCCCHHHHHHHHH RLSFTKLKEINPAGAATLDQLKTLCHNAQGSSGDNIYYVLAYMQKFDSPFLTTAKATFTT HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHCCCCEEECHHHHHH AATKAETICSLPAASFAGAKLSYGIFNINGYVTDQLNADQVPADYPSPTVGGTDFMSVDE HHHHHHHHHCCCCCCCCCCEEEEEEEEECEEEECCCCCCCCCCCCCCCCCCCCCCCHHHH AFNRTYVALNDSIAGQPTLGTVKQYEETSKVYFDAFDGSAQNLSFK HHCCEEEEECCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA