Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is yfbI [C]
Identifier: 183220385
GI number: 183220385
Start: 1016481
End: 1017944
Strand: Reverse
Name: yfbI [C]
Synonym: LEPBI_I0981
Alternate gene names: 183220385
Gene position: 1017944-1016481 (Counterclockwise)
Preceding gene: 183220387
Following gene: 183220383
Centisome position: 28.28
GC content: 37.23
Gene sequence:
>1464_bases GTGCCATTTTTCACGCCCAAAAGAACGTTTTTTCTCCTTTTCACAACCCTTGTCCTATACTTATTTTGGGGGAATGCAAG CCCACTCGTGGACCAAGATGAGGCTGCTTATGCTGGATTTGCAAGGACGATGGCAGAGACAGGGGATTATTTACAGATGG AATTCCCTTACTCCACACCTCACAGGAAACCTCCCTTACATTTTTGGATCACTTCATTTTTTTTCCAATGTTTTGGCGTA AATGAATTTGTTTTAAGAATTTTTCCTGCCCTTTGTATCTTAGGTACTTCTCTTCTCACATACCATCTATCGTTTGTTAT GTTCAATAGCAGAACAGCTTTATATGCTTTTAGTATATTGAGTTTTTCTCTCTATTTTCCGTTAAATGGAAAAATTGCCC TGGTTGATTCTTTACTCGTTTTCTTCGGGATGTTAGGATTTACTTCCCTGCATCATTTTATACGTTCCGAAAAATGGATT TATGCACTCGTATTCTGGTGTTCAGTGAGTATGGGAGTCCTCATCAAAGGGCCCCCGATCTTGATTTTTCTTGGTGGAAC TTGTTTTCTTTTGTTATTTTTTTCTAAAATTCGACCTACGATTTGGAAACTACATCCGTGGTTTGGATTACCATTGGCTT TATTACCACTGATGACATGGGGTTATTGTTCATGGCAAAAAGATGAAGGGGAACTCATTCGTTGGATGATTGATTGGTAC ATCTTGCGACGAGCCACAAATCCAGTGTTTGGGCAATCAGGCCCACCTGGCACCTACTTCGTGTTATTCCTTGTGACGTT TTTCCCTTGGACTCGAGTGTATCTTTCTTTTCTAAAGGAAATGTTTTGGAGGTTTGTCTCTCATTTAAATGCAAAGGAAA TCAAAGATTCTATTTTCTCCTCTTTTCGGAATGGGATCCTTTTGCCACTTTCGCCTCGATCCTATTTGATGATTGGACTT GTATTTTCTTGGATATTTTATGAATTAATATCGAGTAAATTACCTTCGTATCCTTTGTCAGCTTACCCCATTCTTTCTAT TTTACTTGCCGAACAATTATCCAAAAAACACAATCAAATTTACTTATATAGACTGTATCTTACATCAGCGATTGTGATGA TGTTTGTGATCAGTTTTTTCATTTTACCAAAATTTAGCGAATTGAGAAATGATTCCAAAAAACTAGCGGAGATCATGAAT CAATCAGTCTCCCCAAATGAAACCTTGTTTTCGTTTGGTGGTCTTGGAATTCCTAGTTTTGCTTTTTACTACCACAAACC AATCAAAGAAATTGGAATGAATGATATCATCAGTCACAAAGGTAAAATTCTCATGACAGAATCGGACAAATTGATGTTGG AAGCAATGGGAATCAAACTAAGTGCAATTGGCGAACCAATTTCTATCTATGCTTATGACAGAAATAAAACCTTGCATTTA ATTCTTGTCAGTCGAAAGAATTAA
Upstream 100 bases:
>100_bases CTATTTTCCAATTTGATTCCAGTTTTGTTACAAAATGGATACAAAGATCTTGGTTTCAAATAGGTTTTGACAAGGGAGAG AGGGTTTTCCTTCTAGGAAT
Downstream 100 bases:
>100_bases TCAAGGAATCTACGTTTTAGATCTGGTGTGGGCACCATACAACTCTCGGCTTTGCCAAACCACTGGTAACGGTGTTTGGC AATCCAGCGATAAATTTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; Dolichyl-Phosphate-Mannose-Protein Mannosyltransferase; Melitin Resistance Protein; Glycosyltransferase; Glucosyltransferase
Number of amino acids: Translated: 487; Mature: 486
Protein sequence:
>487_residues MPFFTPKRTFFLLFTTLVLYLFWGNASPLVDQDEAAYAGFARTMAETGDYLQMEFPYSTPHRKPPLHFWITSFFFQCFGV NEFVLRIFPALCILGTSLLTYHLSFVMFNSRTALYAFSILSFSLYFPLNGKIALVDSLLVFFGMLGFTSLHHFIRSEKWI YALVFWCSVSMGVLIKGPPILIFLGGTCFLLLFFSKIRPTIWKLHPWFGLPLALLPLMTWGYCSWQKDEGELIRWMIDWY ILRRATNPVFGQSGPPGTYFVLFLVTFFPWTRVYLSFLKEMFWRFVSHLNAKEIKDSIFSSFRNGILLPLSPRSYLMIGL VFSWIFYELISSKLPSYPLSAYPILSILLAEQLSKKHNQIYLYRLYLTSAIVMMFVISFFILPKFSELRNDSKKLAEIMN QSVSPNETLFSFGGLGIPSFAFYYHKPIKEIGMNDIISHKGKILMTESDKLMLEAMGIKLSAIGEPISIYAYDRNKTLHL ILVSRKN
Sequences:
>Translated_487_residues MPFFTPKRTFFLLFTTLVLYLFWGNASPLVDQDEAAYAGFARTMAETGDYLQMEFPYSTPHRKPPLHFWITSFFFQCFGV NEFVLRIFPALCILGTSLLTYHLSFVMFNSRTALYAFSILSFSLYFPLNGKIALVDSLLVFFGMLGFTSLHHFIRSEKWI YALVFWCSVSMGVLIKGPPILIFLGGTCFLLLFFSKIRPTIWKLHPWFGLPLALLPLMTWGYCSWQKDEGELIRWMIDWY ILRRATNPVFGQSGPPGTYFVLFLVTFFPWTRVYLSFLKEMFWRFVSHLNAKEIKDSIFSSFRNGILLPLSPRSYLMIGL VFSWIFYELISSKLPSYPLSAYPILSILLAEQLSKKHNQIYLYRLYLTSAIVMMFVISFFILPKFSELRNDSKKLAEIMN QSVSPNETLFSFGGLGIPSFAFYYHKPIKEIGMNDIISHKGKILMTESDKLMLEAMGIKLSAIGEPISIYAYDRNKTLHL ILVSRKN >Mature_486_residues PFFTPKRTFFLLFTTLVLYLFWGNASPLVDQDEAAYAGFARTMAETGDYLQMEFPYSTPHRKPPLHFWITSFFFQCFGVN EFVLRIFPALCILGTSLLTYHLSFVMFNSRTALYAFSILSFSLYFPLNGKIALVDSLLVFFGMLGFTSLHHFIRSEKWIY ALVFWCSVSMGVLIKGPPILIFLGGTCFLLLFFSKIRPTIWKLHPWFGLPLALLPLMTWGYCSWQKDEGELIRWMIDWYI LRRATNPVFGQSGPPGTYFVLFLVTFFPWTRVYLSFLKEMFWRFVSHLNAKEIKDSIFSSFRNGILLPLSPRSYLMIGLV FSWIFYELISSKLPSYPLSAYPILSILLAEQLSKKHNQIYLYRLYLTSAIVMMFVISFFILPKFSELRNDSKKLAEIMNQ SVSPNETLFSFGGLGIPSFAFYYHKPIKEIGMNDIISHKGKILMTESDKLMLEAMGIKLSAIGEPISIYAYDRNKTLHLI LVSRKN
Specific function: Unknown
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Integral membrane protein (Potential) [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56429; Mature: 56297
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFFTPKRTFFLLFTTLVLYLFWGNASPLVDQDEAAYAGFARTMAETGDYLQMEFPYSTP CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC HRKPPLHFWITSFFFQCFGVNEFVLRIFPALCILGTSLLTYHLSFVMFNSRTALYAFSIL CCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHH SFSLYFPLNGKIALVDSLLVFFGMLGFTSLHHFIRSEKWIYALVFWCSVSMGVLIKGPPI HEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEECCCE LIFLGGTCFLLLFFSKIRPTIWKLHPWFGLPLALLPLMTWGYCSWQKDEGELIRWMIDWY EEEECHHHHHHHHHHHHCCHHEEECCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH ILRRATNPVFGQSGPPGTYFVLFLVTFFPWTRVYLSFLKEMFWRFVSHLNAKEIKDSIFS HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH SFRNGILLPLSPRSYLMIGLVFSWIFYELISSKLPSYPLSAYPILSILLAEQLSKKHNQI HHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEE YLYRLYLTSAIVMMFVISFFILPKFSELRNDSKKLAEIMNQSVSPNETLFSFGGLGIPSF EEEHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHCCCCCCCCHHHHCCCCCCCHH AFYYHKPIKEIGMNDIISHKGKILMTESDKLMLEAMGIKLSAIGEPISIYAYDRNKTLHL HHHHHCCHHHCCCHHHHHCCCCEEEECCCCEEHHHHCEEEEECCCCEEEEEECCCCEEEE ILVSRKN EEEECCC >Mature Secondary Structure PFFTPKRTFFLLFTTLVLYLFWGNASPLVDQDEAAYAGFARTMAETGDYLQMEFPYSTP CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC HRKPPLHFWITSFFFQCFGVNEFVLRIFPALCILGTSLLTYHLSFVMFNSRTALYAFSIL CCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHH SFSLYFPLNGKIALVDSLLVFFGMLGFTSLHHFIRSEKWIYALVFWCSVSMGVLIKGPPI HEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEECCCE LIFLGGTCFLLLFFSKIRPTIWKLHPWFGLPLALLPLMTWGYCSWQKDEGELIRWMIDWY EEEECHHHHHHHHHHHHCCHHEEECCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH ILRRATNPVFGQSGPPGTYFVLFLVTFFPWTRVYLSFLKEMFWRFVSHLNAKEIKDSIFS HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH SFRNGILLPLSPRSYLMIGLVFSWIFYELISSKLPSYPLSAYPILSILLAEQLSKKHNQI HHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEE YLYRLYLTSAIVMMFVISFFILPKFSELRNDSKKLAEIMNQSVSPNETLFSFGGLGIPSF EEEHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHCCCCCCCCHHHHCCCCCCCHH AFYYHKPIKEIGMNDIISHKGKILMTESDKLMLEAMGIKLSAIGEPISIYAYDRNKTLHL HHHHHCCHHHCCCHHHHHCCCCEEEECCCCEEHHHHCEEEEECCCCEEEEEECCCCEEEE ILVSRKN EEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA