Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
---|---|
Accession | NC_010602 |
Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is tatA [C]
Identifier: 183220378
GI number: 183220378
Start: 1009885
End: 1010154
Strand: Reverse
Name: tatA [C]
Synonym: LEPBI_I0974
Alternate gene names: 183220378
Gene position: 1010154-1009885 (Counterclockwise)
Preceding gene: 183220380
Following gene: 183220377
Centisome position: 28.06
GC content: 41.11
Gene sequence:
>270_bases ATGCCATCCAATCCGTTTTCTTTTCAAGCACCTATTGCTTTTTTTAATTTAGGACCATGGGAGATTGCACTCATCGTTTT TTTAGCCTTACTTTTTTTTGGTGGAAAACGATTGCCAAGCCTTGCCAAAGACTTGGGTTCTGGGATCAAAGAATTTAGAA AGTCTCTCACGGGCCAAGACGAAGAGCCGAGCCAAACGAGTTTTCCCGTAGAAGAACCAAAACAGACTCCCCAGTCCAAT TCCAAAACTGGAAAAAAGAAAAAAGCTTAA
Upstream 100 bases:
>100_bases TAAACTCCACCAGAAAATAGGTTTGGCAAGACCTTAAAGAATTCTATCATTCCGCTTGCTTCCAGATTCGTTTGCATAAC TCTTGCCTTAAGAGGGAAAT
Downstream 100 bases:
>100_bases TCCATCCCATTGGCTGAAAAAAAAAGAACCGCACTGCCACTGCCGGAAGATTCGGAAACCAGGGAAAAATACATGTCCCT GGGCGACCATTTAGAGGAAC
Product: Sec-independent protein secretion pathway component TatA/E
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MPSNPFSFQAPIAFFNLGPWEIALIVFLALLFFGGKRLPSLAKDLGSGIKEFRKSLTGQDEEPSQTSFPVEEPKQTPQSN SKTGKKKKA
Sequences:
>Translated_89_residues MPSNPFSFQAPIAFFNLGPWEIALIVFLALLFFGGKRLPSLAKDLGSGIKEFRKSLTGQDEEPSQTSFPVEEPKQTPQSN SKTGKKKKA >Mature_88_residues PSNPFSFQAPIAFFNLGPWEIALIVFLALLFFGGKRLPSLAKDLGSGIKEFRKSLTGQDEEPSQTSFPVEEPKQTPQSNS KTGKKKKA
Specific function: Required For Correct Localization Of Precursor Proteins Bearing Signal Peptides With The Twin Arginine Conserved Motif S/T-R-R-X-F-L-K. This Sec-Independent Pathway Is Termed Tat For Twin-Arginine Translocation System. This System Mainly Transports Protei
COG id: COG1826
COG function: function code U; Sec-independent protein secretion pathway components
Gene ontology:
Cell location: Inner-Membrane Bound [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9799; Mature: 9668
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSNPFSFQAPIAFFNLGPWEIALIVFLALLFFGGKRLPSLAKDLGSGIKEFRKSLTGQD CCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC EEPSQTSFPVEEPKQTPQSNSKTGKKKKA CCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PSNPFSFQAPIAFFNLGPWEIALIVFLALLFFGGKRLPSLAKDLGSGIKEFRKSLTGQD CCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC EEPSQTSFPVEEPKQTPQSNSKTGKKKKA CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA