Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220364
Identifier: 183220364
GI number: 183220364
Start: 992670
End: 993812
Strand: Direct
Name: 183220364
Synonym: LEPBI_I0960
Alternate gene names: NA
Gene position: 992670-993812 (Clockwise)
Preceding gene: 183220358
Following gene: 183220366
Centisome position: 27.58
GC content: 37.8
Gene sequence:
>1143_bases ATGATTTTTATGGCACAGGTCGTTTGGATTTTTCCAAAATTTGATTCAATCTACATCTTTTACATCGTACTCATGGGACT TGCTGCCTTCATTTATATTAAGATCATGAACTATTTGCATCATAAACAAGCAAATGTCGTAAACCATTGGGTCGAATTTC AAAGGTATGCCATTGCCAGAAAGTGCAACCAGGTAGAACTCAATATCTTACATAGTTTTTATGATGATCTCAACGCAGAA GAACGGGAAGTGTATCTTTTGCCTGAAAACCGAAACAAACTCAAAAATGCATTGTATCGCTATTTTTTAAAATCGAATGC CAATACCACGGAAAAGGAAGTGAATTTGTTTGATAAACTCTTTCGGTCAGGAGTGGAATTCAAAAAAGAAATTTTATCGC TGAATGATTTGACAGTCGGGGAAGTGGGAGCCTTGGAAGCCGATGGAAGAGAGGAACTCACTTATGTGATGCAAAAAACG GCAGATGAATTGTTATTATCAGCAAAAGGAATCTCCAAAGACTTACTCGTTCCTGGGAAAGAGGCAAAATTATATGTCTT CAGGCCAAGTAGCGGTGGTTATCTTTTGGATGGAAGCGTTCTTCGTACCAATGAAAGTGGACTTATCTTTCACTTTAATG GGAAGATCGAACGTAAGGGTGAATCCCATTTGATGTTAACCGATAAGATTTCCATTACAGTTTCTCCTTGGCCACCACCT GAACAAAAAAAAGATTTGGAACTCGATAAAAACAAATTATTACTCAGTGAAGAAAACATTGATAAACAGTTAGAAGTTTT GAAACGAATCGCAAAAGACCAAAAGGAAAATAATGAAAAAAGATTTGATATCAAGGAAACGGCAAAACCTTTCATCACAC TTTCGGAACGATTGAGTGACCGAGGGATTTTATTTACCTTCCCTTCGGGGATCTCTTCTGAGATTTGGAAACACCAAGAC CTTTGGGAAGTGATTTTTAGTTTCGAAAAGGGACCTGAGTTTCGGATTCGTTCAAAAATGATGCCCACCAAACAAAAGTC AGATTTGTATCTTTTACGATATGTCGATGCCGATGAGGAGATGCGGAAATCTTTGTATGAAGAAATCCGCAAACGTGGAG GAGTAAGAGAGGTGTTAACATAA
Upstream 100 bases:
>100_bases ACAATTGTCCCGTGGAGTGGATTTTTGCCGATAATTTTGAAGTAGGAAGAGCTCACCTTACTTCCATTCGACACAACAGA GATATGAGGAAAAGTAATTT
Downstream 100 bases:
>100_bases TCCTCTCTTACATCTTATAAACTTTCGGGGAAAGCACCTTTGGATGGTGTTTTTGCTTCTTTTGATAATAAAATCAAATC TACCTTGGGGATTTCTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MIFMAQVVWIFPKFDSIYIFYIVLMGLAAFIYIKIMNYLHHKQANVVNHWVEFQRYAIARKCNQVELNILHSFYDDLNAE EREVYLLPENRNKLKNALYRYFLKSNANTTEKEVNLFDKLFRSGVEFKKEILSLNDLTVGEVGALEADGREELTYVMQKT ADELLLSAKGISKDLLVPGKEAKLYVFRPSSGGYLLDGSVLRTNESGLIFHFNGKIERKGESHLMLTDKISITVSPWPPP EQKKDLELDKNKLLLSEENIDKQLEVLKRIAKDQKENNEKRFDIKETAKPFITLSERLSDRGILFTFPSGISSEIWKHQD LWEVIFSFEKGPEFRIRSKMMPTKQKSDLYLLRYVDADEEMRKSLYEEIRKRGGVREVLT
Sequences:
>Translated_380_residues MIFMAQVVWIFPKFDSIYIFYIVLMGLAAFIYIKIMNYLHHKQANVVNHWVEFQRYAIARKCNQVELNILHSFYDDLNAE EREVYLLPENRNKLKNALYRYFLKSNANTTEKEVNLFDKLFRSGVEFKKEILSLNDLTVGEVGALEADGREELTYVMQKT ADELLLSAKGISKDLLVPGKEAKLYVFRPSSGGYLLDGSVLRTNESGLIFHFNGKIERKGESHLMLTDKISITVSPWPPP EQKKDLELDKNKLLLSEENIDKQLEVLKRIAKDQKENNEKRFDIKETAKPFITLSERLSDRGILFTFPSGISSEIWKHQD LWEVIFSFEKGPEFRIRSKMMPTKQKSDLYLLRYVDADEEMRKSLYEEIRKRGGVREVLT >Mature_380_residues MIFMAQVVWIFPKFDSIYIFYIVLMGLAAFIYIKIMNYLHHKQANVVNHWVEFQRYAIARKCNQVELNILHSFYDDLNAE EREVYLLPENRNKLKNALYRYFLKSNANTTEKEVNLFDKLFRSGVEFKKEILSLNDLTVGEVGALEADGREELTYVMQKT ADELLLSAKGISKDLLVPGKEAKLYVFRPSSGGYLLDGSVLRTNESGLIFHFNGKIERKGESHLMLTDKISITVSPWPPP EQKKDLELDKNKLLLSEENIDKQLEVLKRIAKDQKENNEKRFDIKETAKPFITLSERLSDRGILFTFPSGISSEIWKHQD LWEVIFSFEKGPEFRIRSKMMPTKQKSDLYLLRYVDADEEMRKSLYEEIRKRGGVREVLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44416; Mature: 44416
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFMAQVVWIFPKFDSIYIFYIVLMGLAAFIYIKIMNYLHHKQANVVNHWVEFQRYAIAR CEEHEEEHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KCNQVELNILHSFYDDLNAEEREVYLLPENRNKLKNALYRYFLKSNANTTEKEVNLFDKL HCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH FRSGVEFKKEILSLNDLTVGEVGALEADGREELTYVMQKTADELLLSAKGISKDLLVPGK HHCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC EAKLYVFRPSSGGYLLDGSVLRTNESGLIFHFNGKIERKGESHLMLTDKISITVSPWPPP CCEEEEEECCCCCEEEECCEEEECCCCEEEEECCEEECCCCCEEEEEEEEEEEECCCCCC EQKKDLELDKNKLLLSEENIDKQLEVLKRIAKDQKENNEKRFDIKETAKPFITLSERLSD CCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHEEHHHHHCC RGILFTFPSGISSEIWKHQDLWEVIFSFEKGPEFRIRSKMMPTKQKSDLYLLRYVDADEE CCEEEECCCCCHHHHHCCHHHHHHHHHHCCCCCEEEHHCCCCCCCCCCEEEEEEECCCHH MRKSLYEEIRKRGGVREVLT HHHHHHHHHHHCCCHHHHCC >Mature Secondary Structure MIFMAQVVWIFPKFDSIYIFYIVLMGLAAFIYIKIMNYLHHKQANVVNHWVEFQRYAIAR CEEHEEEHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KCNQVELNILHSFYDDLNAEEREVYLLPENRNKLKNALYRYFLKSNANTTEKEVNLFDKL HCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH FRSGVEFKKEILSLNDLTVGEVGALEADGREELTYVMQKTADELLLSAKGISKDLLVPGK HHCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC EAKLYVFRPSSGGYLLDGSVLRTNESGLIFHFNGKIERKGESHLMLTDKISITVSPWPPP CCEEEEEECCCCCEEEECCEEEECCCCEEEEECCEEECCCCCEEEEEEEEEEEECCCCCC EQKKDLELDKNKLLLSEENIDKQLEVLKRIAKDQKENNEKRFDIKETAKPFITLSERLSD CCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHEEHHHHHCC RGILFTFPSGISSEIWKHQDLWEVIFSFEKGPEFRIRSKMMPTKQKSDLYLLRYVDADEE CCEEEECCCCCHHHHHCCHHHHHHHHHHCCCCCEEEHHCCCCCCCCCCEEEEEEECCCHH MRKSLYEEIRKRGGVREVLT HHHHHHHHHHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA