Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220335
Identifier: 183220335
GI number: 183220335
Start: 964003
End: 964950
Strand: Direct
Name: 183220335
Synonym: LEPBI_I0931
Alternate gene names: NA
Gene position: 964003-964950 (Clockwise)
Preceding gene: 183220334
Following gene: 183220336
Centisome position: 26.78
GC content: 38.5
Gene sequence:
>948_bases ATGATTCGTTATGGTACGAGCCAGGAACGAAAACAGGCATTAGGTGAATTGGTTCGTTTCCCAAAAGAACAAGCAAACGA ACTTTACGAACTTGTGGGGGAACAATTAAAAACTGAAAAAGACATGGGTATGAAGATTGTCCTACTAAAAACTGTGGGAG ATCTGGGTTTAAAGGAAAACCATGAAACAGTCATCTCACTCTTCGAAGATCCCAATGAAGATGTGAACAAACAAGCCGTG ACATCTGCCAAAAAAATGAAACTGAGTGAGGCAACAAGTCCACTGCTTGAAAAAGTAAAAAAAGAGGATTTCACCAAAAA TTCGAATTCACTCACTTTATACATCAGTGCCTTAGGAGAATTACCAGATGGGAAAATGGCGGCACCATTTTTAGAAACTA AATTTAGAGAAAAGTTTAATAATGCGGATATCCGTGGTCAAATTGCACTCTATTTTGGTTCCATTCTTTACCAGGAAGCC GAGTCTGCTCTCATTGAAGTTGCTTTTGATGACATCCAACCAACAACTCTCCGTTGTTATGCAATGAATACATTAGGAAA ACTAAAATCAGAAACAGCAAAACCTAAGTTATACGAACTTTTGGATTCCTTAAAAAAAACATCAGGGAAATTGGATGCCA AAAAAGCCCAATCTCTCAAAATTTATGCCATTGGTGCCCTTGTGACCATGGGAGACAAAGAAGTTTTCCAAGAACTCAAT GAATTTGCTCGTGATGATGATAGTATGGTAAGACTCCGTGCCATTGAATTTATGGGGAATTTAAGAGACCCAAAAGCCTT AGAATTATTGGAATACAAGCGGGATCGTGACCCAAGTCCTAAAGTTCAAAAAGCTGCCAAAAAAGCCATTGATATGATCA ATGGAAAAGACACTCCTTCCGAAGAAGAAAAACCTGGGGAAGAAAAAACGGAAGAAGAACCCAAATGA
Upstream 100 bases:
>100_bases TATTTCCCTTATCTGGTTATTTTCTCTTTCTCCTATCCTTGGGAAAGAGAAAGAACTTTCTTCTGAACAAATCTCCAAAA AAAAAGAAGTTCTCTCTAAA
Downstream 100 bases:
>100_bases AAATCCAAAAGATCGTTTCGATGCCCTTTCAGGAATGGTTTTCTTCTGTTTTCCTTTTATTTTTTCTAATCCATTTCCTT TTTCACTCCTTGTTGTATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MIRYGTSQERKQALGELVRFPKEQANELYELVGEQLKTEKDMGMKIVLLKTVGDLGLKENHETVISLFEDPNEDVNKQAV TSAKKMKLSEATSPLLEKVKKEDFTKNSNSLTLYISALGELPDGKMAAPFLETKFREKFNNADIRGQIALYFGSILYQEA ESALIEVAFDDIQPTTLRCYAMNTLGKLKSETAKPKLYELLDSLKKTSGKLDAKKAQSLKIYAIGALVTMGDKEVFQELN EFARDDDSMVRLRAIEFMGNLRDPKALELLEYKRDRDPSPKVQKAAKKAIDMINGKDTPSEEEKPGEEKTEEEPK
Sequences:
>Translated_315_residues MIRYGTSQERKQALGELVRFPKEQANELYELVGEQLKTEKDMGMKIVLLKTVGDLGLKENHETVISLFEDPNEDVNKQAV TSAKKMKLSEATSPLLEKVKKEDFTKNSNSLTLYISALGELPDGKMAAPFLETKFREKFNNADIRGQIALYFGSILYQEA ESALIEVAFDDIQPTTLRCYAMNTLGKLKSETAKPKLYELLDSLKKTSGKLDAKKAQSLKIYAIGALVTMGDKEVFQELN EFARDDDSMVRLRAIEFMGNLRDPKALELLEYKRDRDPSPKVQKAAKKAIDMINGKDTPSEEEKPGEEKTEEEPK >Mature_315_residues MIRYGTSQERKQALGELVRFPKEQANELYELVGEQLKTEKDMGMKIVLLKTVGDLGLKENHETVISLFEDPNEDVNKQAV TSAKKMKLSEATSPLLEKVKKEDFTKNSNSLTLYISALGELPDGKMAAPFLETKFREKFNNADIRGQIALYFGSILYQEA ESALIEVAFDDIQPTTLRCYAMNTLGKLKSETAKPKLYELLDSLKKTSGKLDAKKAQSLKIYAIGALVTMGDKEVFQELN EFARDDDSMVRLRAIEFMGNLRDPKALELLEYKRDRDPSPKVQKAAKKAIDMINGKDTPSEEEKPGEEKTEEEPK
Specific function: Unknown
COG id: COG1413
COG function: function code C; FOG: HEAT repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35528; Mature: 35528
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRYGTSQERKQALGELVRFPKEQANELYELVGEQLKTEKDMGMKIVLLKTVGDLGLKEN CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHCCCCCCC HETVISLFEDPNEDVNKQAVTSAKKMKLSEATSPLLEKVKKEDFTKNSNSLTLYISALGE HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC LPDGKMAAPFLETKFREKFNNADIRGQIALYFGSILYQEAESALIEVAFDDIQPTTLRCY CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE AMNTLGKLKSETAKPKLYELLDSLKKTSGKLDAKKAQSLKIYAIGALVTMGDKEVFQELN EHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHCCEEEEEEEHHEECCCHHHHHHHH EFARDDDSMVRLRAIEFMGNLRDPKALELLEYKRDRDPSPKVQKAAKKAIDMINGKDTPS HHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC EEEKPGEEKTEEEPK CCCCCCCCCCCCCCC >Mature Secondary Structure MIRYGTSQERKQALGELVRFPKEQANELYELVGEQLKTEKDMGMKIVLLKTVGDLGLKEN CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHCCCCCCC HETVISLFEDPNEDVNKQAVTSAKKMKLSEATSPLLEKVKKEDFTKNSNSLTLYISALGE HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC LPDGKMAAPFLETKFREKFNNADIRGQIALYFGSILYQEAESALIEVAFDDIQPTTLRCY CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE AMNTLGKLKSETAKPKLYELLDSLKKTSGKLDAKKAQSLKIYAIGALVTMGDKEVFQELN EHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHCCEEEEEEEHHEECCCHHHHHHHH EFARDDDSMVRLRAIEFMGNLRDPKALELLEYKRDRDPSPKVQKAAKKAIDMINGKDTPS HHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC EEEKPGEEKTEEEPK CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA