| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is cheB1 [H]
Identifier: 183220323
GI number: 183220323
Start: 950175
End: 951218
Strand: Reverse
Name: cheB1 [H]
Synonym: LEPBI_I0919
Alternate gene names: 183220323
Gene position: 951218-950175 (Counterclockwise)
Preceding gene: 183220324
Following gene: 183220322
Centisome position: 26.43
GC content: 40.13
Gene sequence:
>1044_bases ATGAAAAAAAACAAAGTGATTATCGTAGATGACCAACGTACAGTGCGCGGAATGATCAAACGTTGGATCGAATCAGATCC AAACTGGGAAGTTGTAGGCGAGGCATCAAACCCATTCGAAGCTCGTGACCAAATCATCGAAAAACAACCTGATGTGATGA CATTAGATGTTCATATGCCCGAAATGGATGGAATCGAATTTTTAAAAAAGCTCCTCCCCCAACACCCAATGCCTGTGATC ATGTTTAGTTCTTCCACAACGGAAGGGACTGCAATCACCTTAGAAGCTCTTGATGCGGGTGCCTTTGACTATGTAACAAA GCCTTCAGGAACTCCAGAAAGTTTGATTGAAGCAAAAGAAGATTTGTTAAGTAAGTTGCATGCGGCCTTGAACTACAATG TATCACTTTATCAAAATACGAAAAGCACTACCCCATCGAAAATTTTATCAGCGAAAAGACACACATCTTTTAAAACCAAA GTCATCGTCATAGGATCCAGTACAGGTGGAACAACCGCTTTACGAAAACTATTAGATGATGTGGATGAATCTTTTCCACC GATCCTTGTTGCACAACATATGCCAGAAAATTTCACTGCCCTATTTGCAGGCAGACTCAACGCAGAATTAAAAGTAAAAG TCATTGAGGCAAAAGACAAACAGTTATTAGAAAATGGAACCGTTTACATTGCGCCAGGAAATTTCCACCTAGAAATCCAA AAACTCAATGGAGAACTCTATACCAAAATCACTCAGTTCGAAAAAGTAAATGGCCATAGACCTTCCGTAGACGTCCTATT TGATTCTGTTGTTAACTGTGGGATTGCCAACCAAACCATCTCCATCATCCTCACTGGTATGGGAAGCGATGGTGCAAAGG GATTGCTTAATTTAAAGAATAATGGAAGCATCACCTTGGGCCAAAATAAAGAAACCTGTGTTGTTTATGGTATGCCAAAA GTTGCATTTGAAATAGGTGCTGTGATGTACCAACTTCCTTTGGAATCCATTGCAGATAAAACAAGAGAGATCGGTTCCAA ATGA
Upstream 100 bases:
>100_bases TCAATGGTTTGGCTGGTTGTACGATTTTAGGAAACGGACATGCCGGTCTCATTCTCGATGTAAGAAAACTGATCAACCAA CATATGGCAATCCACTCTCC
Downstream 100 bases:
>100_bases TTCCTCATAGCCTTGTATTAAGTTCACAAACAACGGATCAATTAATCCATATTTTAAACGAGATCCATTTTACCTACGAA CGTTTCGAAAATTTAAGTGA
Product: chemotaxis response regulator CheB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MKKNKVIIVDDQRTVRGMIKRWIESDPNWEVVGEASNPFEARDQIIEKQPDVMTLDVHMPEMDGIEFLKKLLPQHPMPVI MFSSSTTEGTAITLEALDAGAFDYVTKPSGTPESLIEAKEDLLSKLHAALNYNVSLYQNTKSTTPSKILSAKRHTSFKTK VIVIGSSTGGTTALRKLLDDVDESFPPILVAQHMPENFTALFAGRLNAELKVKVIEAKDKQLLENGTVYIAPGNFHLEIQ KLNGELYTKITQFEKVNGHRPSVDVLFDSVVNCGIANQTISIILTGMGSDGAKGLLNLKNNGSITLGQNKETCVVYGMPK VAFEIGAVMYQLPLESIADKTREIGSK
Sequences:
>Translated_347_residues MKKNKVIIVDDQRTVRGMIKRWIESDPNWEVVGEASNPFEARDQIIEKQPDVMTLDVHMPEMDGIEFLKKLLPQHPMPVI MFSSSTTEGTAITLEALDAGAFDYVTKPSGTPESLIEAKEDLLSKLHAALNYNVSLYQNTKSTTPSKILSAKRHTSFKTK VIVIGSSTGGTTALRKLLDDVDESFPPILVAQHMPENFTALFAGRLNAELKVKVIEAKDKQLLENGTVYIAPGNFHLEIQ KLNGELYTKITQFEKVNGHRPSVDVLFDSVVNCGIANQTISIILTGMGSDGAKGLLNLKNNGSITLGQNKETCVVYGMPK VAFEIGAVMYQLPLESIADKTREIGSK >Mature_347_residues MKKNKVIIVDDQRTVRGMIKRWIESDPNWEVVGEASNPFEARDQIIEKQPDVMTLDVHMPEMDGIEFLKKLLPQHPMPVI MFSSSTTEGTAITLEALDAGAFDYVTKPSGTPESLIEAKEDLLSKLHAALNYNVSLYQNTKSTTPSKILSAKRHTSFKTK VIVIGSSTGGTTALRKLLDDVDESFPPILVAQHMPENFTALFAGRLNAELKVKVIEAKDKQLLENGTVYIAPGNFHLEIQ KLNGELYTKITQFEKVNGHRPSVDVLFDSVVNCGIANQTISIILTGMGSDGAKGLLNLKNNGSITLGQNKETCVVYGMPK VAFEIGAVMYQLPLESIADKTREIGSK
Specific function: Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR [H]
COG id: COG2201
COG function: function code NT; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788192, Length=344, Percent_Identity=41.2790697674419, Blast_Score=257, Evalue=9e-70, Organism=Escherichia coli, GI87082052, Length=104, Percent_Identity=35.5769230769231, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI1786911, Length=124, Percent_Identity=33.8709677419355, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1790299, Length=120, Percent_Identity=32.5, Blast_Score=65, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR008248 - InterPro: IPR000673 - InterPro: IPR001789 [H]
Pfam domain/function: PF01339 CheB_methylest; PF00072 Response_reg [H]
EC number: =3.1.1.61 [H]
Molecular weight: Translated: 38161; Mature: 38161
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50122 CHEB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNKVIIVDDQRTVRGMIKRWIESDPNWEVVGEASNPFEARDQIIEKQPDVMTLDVHMP CCCCCEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEEECC EMDGIEFLKKLLPQHPMPVIMFSSSTTEGTAITLEALDAGAFDYVTKPSGTPESLIEAKE CCCHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCEEECCCCCHHHHHHHHH DLLSKLHAALNYNVSLYQNTKSTTPSKILSAKRHTSFKTKVIVIGSSTGGTTALRKLLDD HHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHH VDESFPPILVAQHMPENFTALFAGRLNAELKVKVIEAKDKQLLENGTVYIAPGNFHLEIQ HHHCCCCEEEECCCCCCCEEEEEECCCCEEEEEEEECCCHHHHHCCEEEEECCCEEEEEE KLNGELYTKITQFEKVNGHRPSVDVLFDSVVNCGIANQTISIILTGMGSDGAKGLLNLKN ECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEECC NGSITLGQNKETCVVYGMPKVAFEIGAVMYQLPLESIADKTREIGSK CCCEEECCCCCEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHCCC >Mature Secondary Structure MKKNKVIIVDDQRTVRGMIKRWIESDPNWEVVGEASNPFEARDQIIEKQPDVMTLDVHMP CCCCCEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEEECC EMDGIEFLKKLLPQHPMPVIMFSSSTTEGTAITLEALDAGAFDYVTKPSGTPESLIEAKE CCCHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCEEECCCCCHHHHHHHHH DLLSKLHAALNYNVSLYQNTKSTTPSKILSAKRHTSFKTKVIVIGSSTGGTTALRKLLDD HHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHH VDESFPPILVAQHMPENFTALFAGRLNAELKVKVIEAKDKQLLENGTVYIAPGNFHLEIQ HHHCCCCEEEECCCCCCCEEEEEECCCCEEEEEEEECCCHHHHHCCEEEEECCCEEEEEE KLNGELYTKITQFEKVNGHRPSVDVLFDSVVNCGIANQTISIILTGMGSDGAKGLLNLKN ECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEECC NGSITLGQNKETCVVYGMPKVAFEIGAVMYQLPLESIADKTREIGSK CCCEEECCCCCEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11259647 [H]