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The map label for this gene is ycbC [H]

Identifier: 183220138

GI number: 183220138

Start: 740627

End: 741403

Strand: Reverse

Name: ycbC [H]

Synonym: LEPBI_I0726

Alternate gene names: 183220138

Gene position: 741403-740627 (Counterclockwise)

Preceding gene: 183220139

Following gene: 183220137

Centisome position: 20.6

GC content: 38.1

Gene sequence:

>777_bases
ATGGAATCTTTCTTTTTTATCCTTTCAAAAGTACTCACTATCTTTCTCTATCCACTACCAGTTTTTTTTCTACTTTGTTT
TTATCTTTTGTTCCGTATCAAATCTGGGAAAACAAAATTCCTATTTTTTATCATTTGCCTTTTTTTATACCTCGCATCCA
GTTCCTTTATCGCCAACCGATTGGTGACAGAATTAGAAAAAGAGTATCCACCTGTCTCCTTGCAAGATGCTCCCAAAGTT
GATGTTGCCATTGTCCTTGGTGGGATGATCCAAACTATCTCCTCTGTCAAAGCTAGACCTGAACTCACAGATTCTGCAGA
TCGTATTACTGATGCTATACGGCTCTACAAAGCAGGCAAAGTGAAAAAGATACTTTTTACGGGAGGTTCTGGATTATTAC
TTTCTGATACGTACAGAGAAGCCGACTTAGCCAAATCTTTGTTCATCGACCTCGGTGTCAAAGAAGAGGATATTATCTTA
GAAAACAATTCACGTAACACCCATGAAAATGCTGTGGAAACAAAAAAAATTTTGATGGAAAAAAACTTCCAATCTTTTCT
TCTCATCACCTCAGCCTTTCATATGAAACGTTCTCTTGGTTGTTTCCAAAAACAAAATCTGAATGTATTCCCTTTTCCCA
CAGATTACCGATCATTTAATACCGATTCGGGCGCGTTTGAGCTCTACCTGCCATCTGCTGGGTATTTGGATTTAACCACT
CTCAGCATCAAAGAATGGGTTGGGTATTTTGTGTATCGGACCAAATCCTACCTATAA

Upstream 100 bases:

>100_bases
GTCCGTTACCCTCACCCTTCTCAATATTGGGGGAGTGGGATTGGGGTCCTTGGTCCTGATTTGGACTGGTAAAAAACACA
CCCTTTACGATCATTTCCTT

Downstream 100 bases:

>100_bases
AACCGGGATTTTTTCAAGGTTTTCCAATGACCTTTTTGTTTGACCGAAACTTGCAATCAGAGAGGTTAGAGGAAAGACGA
GATTTCGTCTAAAGAATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MESFFFILSKVLTIFLYPLPVFFLLCFYLLFRIKSGKTKFLFFIICLFLYLASSSFIANRLVTELEKEYPPVSLQDAPKV
DVAIVLGGMIQTISSVKARPELTDSADRITDAIRLYKAGKVKKILFTGGSGLLLSDTYREADLAKSLFIDLGVKEEDIIL
ENNSRNTHENAVETKKILMEKNFQSFLLITSAFHMKRSLGCFQKQNLNVFPFPTDYRSFNTDSGAFELYLPSAGYLDLTT
LSIKEWVGYFVYRTKSYL

Sequences:

>Translated_258_residues
MESFFFILSKVLTIFLYPLPVFFLLCFYLLFRIKSGKTKFLFFIICLFLYLASSSFIANRLVTELEKEYPPVSLQDAPKV
DVAIVLGGMIQTISSVKARPELTDSADRITDAIRLYKAGKVKKILFTGGSGLLLSDTYREADLAKSLFIDLGVKEEDIIL
ENNSRNTHENAVETKKILMEKNFQSFLLITSAFHMKRSLGCFQKQNLNVFPFPTDYRSFNTDSGAFELYLPSAGYLDLTT
LSIKEWVGYFVYRTKSYL
>Mature_258_residues
MESFFFILSKVLTIFLYPLPVFFLLCFYLLFRIKSGKTKFLFFIICLFLYLASSSFIANRLVTELEKEYPPVSLQDAPKV
DVAIVLGGMIQTISSVKARPELTDSADRITDAIRLYKAGKVKKILFTGGSGLLLSDTYREADLAKSLFIDLGVKEEDIIL
ENNSRNTHENAVETKKILMEKNFQSFLLITSAFHMKRSLGCFQKQNLNVFPFPTDYRSFNTDSGAFELYLPSAGYLDLTT
LSIKEWVGYFVYRTKSYL

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787150, Length=181, Percent_Identity=29.8342541436464, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 29484; Mature: 29484

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESFFFILSKVLTIFLYPLPVFFLLCFYLLFRIKSGKTKFLFFIICLFLYLASSSFIANR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHH
LVTELEKEYPPVSLQDAPKVDVAIVLGGMIQTISSVKARPELTDSADRITDAIRLYKAGK
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
VKKILFTGGSGLLLSDTYREADLAKSLFIDLGVKEEDIILENNSRNTHENAVETKKILME
EEEEEEECCCCEEEECCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHH
KNFQSFLLITSAFHMKRSLGCFQKQNLNVFPFPTDYRSFNTDSGAFELYLPSAGYLDLTT
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEHH
LSIKEWVGYFVYRTKSYL
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MESFFFILSKVLTIFLYPLPVFFLLCFYLLFRIKSGKTKFLFFIICLFLYLASSSFIANR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHH
LVTELEKEYPPVSLQDAPKVDVAIVLGGMIQTISSVKARPELTDSADRITDAIRLYKAGK
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
VKKILFTGGSGLLLSDTYREADLAKSLFIDLGVKEEDIILENNSRNTHENAVETKKILME
EEEEEEECCCCEEEECCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHH
KNFQSFLLITSAFHMKRSLGCFQKQNLNVFPFPTDYRSFNTDSGAFELYLPSAGYLDLTT
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEHH
LSIKEWVGYFVYRTKSYL
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]