| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220090
Identifier: 183220090
GI number: 183220090
Start: 683846
End: 684718
Strand: Reverse
Name: 183220090
Synonym: LEPBI_I0678
Alternate gene names: NA
Gene position: 684718-683846 (Counterclockwise)
Preceding gene: 183220094
Following gene: 183220089
Centisome position: 19.02
GC content: 35.97
Gene sequence:
>873_bases ATGTCCCCACAAACTCAAGAATACTCCCGTTTTCATTGGCTTATCTGGTTCTTGATTTTTTTTTCTGGATGGAGTTGCCA AAACCTAAATTCTCTCCTTTCGAGAGACCCAAAGTCTGAAATCCCAGCCTCAATTCTCTTTCTCAAATCACCAAGAAAAA TGAATACGACTTTCTTTCGTGATGGCTCTGCGCACTACCGATGTATCCAATGGGAACCAGGAAAATCCACGGGATATGTG GAAAAAATCGAGTTTAGTTTCATTGCGTATGATCCAAGTTTTATCACAAAAATCAATTCTGAGTTTGGGAATGAAACAGT AGAATCCTACAAACTCATTTGGAACCGAAAGGTTGGAAAATTCCAAAGAGATAAGTCTGAAAAAAAAATCATCTTTGTCT ACAAAGACTCGTTTTTTAAAGAAACCAAAGGTGATACAATTGAATCACTCCTTCAAAATCAAATTGCATATAAAGAAAAC AAATCATCCATTGATGAATTGGAAATATTTGAGTTGAGTGGCGATACAGCCACACTTCTGGAAGAAGGCAATCGTTCTGA AATTGGTGGAGAAAATCGATGGTCTCACAATCTTGGATCTAATCAATTTTTCACTTCTTCGAGTACATACACTAAAATTA ACAACCAAACAGTTGTTACAGAACATACTTCGACTCATTATGATTACCACCAATTGAGTTTTGAGTGGAACGAAACAGAA CCCGACAAACTGTTTTTCAAACCCATTTTTAAAGAAAACAACCTACAATTATACTTTGTTCCTCCCTATACCAATGGTCT CACAACCAAAACTAAGGAACCATTTGGTTATAAACGAATGGGAGATTTTTTACTCAAAGAGGAAATGAAATGA
Upstream 100 bases:
>100_bases TACTGTTCTTCGTTCTTCATGGTTCCAAATGACACAGGGGTGCGATGAATTGACTTGTCAAGCGGTTTTCCCTTTTTAGA CTGGCGATACGCACCTATCT
Downstream 100 bases:
>100_bases CAGAAGTTCGTACCCGTTTTGCCCCATCCCCCTCCGGATTCCTTCATGTAGGAGGAGCAAGGACTGCCTTATTCAATTAT TTGTATGCCAAGGCCAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MSPQTQEYSRFHWLIWFLIFFSGWSCQNLNSLLSRDPKSEIPASILFLKSPRKMNTTFFRDGSAHYRCIQWEPGKSTGYV EKIEFSFIAYDPSFITKINSEFGNETVESYKLIWNRKVGKFQRDKSEKKIIFVYKDSFFKETKGDTIESLLQNQIAYKEN KSSIDELEIFELSGDTATLLEEGNRSEIGGENRWSHNLGSNQFFTSSSTYTKINNQTVVTEHTSTHYDYHQLSFEWNETE PDKLFFKPIFKENNLQLYFVPPYTNGLTTKTKEPFGYKRMGDFLLKEEMK
Sequences:
>Translated_290_residues MSPQTQEYSRFHWLIWFLIFFSGWSCQNLNSLLSRDPKSEIPASILFLKSPRKMNTTFFRDGSAHYRCIQWEPGKSTGYV EKIEFSFIAYDPSFITKINSEFGNETVESYKLIWNRKVGKFQRDKSEKKIIFVYKDSFFKETKGDTIESLLQNQIAYKEN KSSIDELEIFELSGDTATLLEEGNRSEIGGENRWSHNLGSNQFFTSSSTYTKINNQTVVTEHTSTHYDYHQLSFEWNETE PDKLFFKPIFKENNLQLYFVPPYTNGLTTKTKEPFGYKRMGDFLLKEEMK >Mature_289_residues SPQTQEYSRFHWLIWFLIFFSGWSCQNLNSLLSRDPKSEIPASILFLKSPRKMNTTFFRDGSAHYRCIQWEPGKSTGYVE KIEFSFIAYDPSFITKINSEFGNETVESYKLIWNRKVGKFQRDKSEKKIIFVYKDSFFKETKGDTIESLLQNQIAYKENK SSIDELEIFELSGDTATLLEEGNRSEIGGENRWSHNLGSNQFFTSSSTYTKINNQTVVTEHTSTHYDYHQLSFEWNETEP DKLFFKPIFKENNLQLYFVPPYTNGLTTKTKEPFGYKRMGDFLLKEEMK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34149; Mature: 34017
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPQTQEYSRFHWLIWFLIFFSGWSCQNLNSLLSRDPKSEIPASILFLKSPRKMNTTFFR CCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHCCEEEEEEECCCCCCCEEEE DGSAHYRCIQWEPGKSTGYVEKIEFSFIAYDPSFITKINSEFGNETVESYKLIWNRKVGK CCCCCEEEEEECCCCCCCCEEEEEEEEEEECCHHHHHHHHHHCHHHHHHHHHHHHCCCCC FQRDKSEKKIIFVYKDSFFKETKGDTIESLLQNQIAYKENKSSIDELEIFELSGDTATLL HHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEC EEGNRSEIGGENRWSHNLGSNQFFTSSSTYTKINNQTVVTEHTSTHYDYHQLSFEWNETE CCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCEEEEEECCCCCCEEEEEEEEECCCC PDKLFFKPIFKENNLQLYFVPPYTNGLTTKTKEPFGYKRMGDFLLKEEMK CCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure SPQTQEYSRFHWLIWFLIFFSGWSCQNLNSLLSRDPKSEIPASILFLKSPRKMNTTFFR CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHCCEEEEEEECCCCCCCEEEE DGSAHYRCIQWEPGKSTGYVEKIEFSFIAYDPSFITKINSEFGNETVESYKLIWNRKVGK CCCCCEEEEEECCCCCCCCEEEEEEEEEEECCHHHHHHHHHHCHHHHHHHHHHHHCCCCC FQRDKSEKKIIFVYKDSFFKETKGDTIESLLQNQIAYKENKSSIDELEIFELSGDTATLL HHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEC EEGNRSEIGGENRWSHNLGSNQFFTSSSTYTKINNQTVVTEHTSTHYDYHQLSFEWNETE CCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCEEEEEECCCCCCEEEEEEEEECCCC PDKLFFKPIFKENNLQLYFVPPYTNGLTTKTKEPFGYKRMGDFLLKEEMK CCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA