| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219651
Identifier: 183219651
GI number: 183219651
Start: 217395
End: 217874
Strand: Direct
Name: 183219651
Synonym: LEPBI_I0226
Alternate gene names: NA
Gene position: 217395-217874 (Clockwise)
Preceding gene: 183219650
Following gene: 183219653
Centisome position: 6.04
GC content: 37.5
Gene sequence:
>480_bases ATGAAGCAGATTTCTTGGAAAAAATGTTTTAAGATTTGGTTGTACAATTTTTATCCACCTTACCTTGGTGCAGGGATTCG GATTACACAAATCGCCACGGATTTATCTTTTTTCCAAGTGGAAATGAAACTTAAGTTTTATAACAAAAACTATGTCGGTG TTCATTTTGGCGGGTCTTTGTACTCCATGTGTGATCCTTTTTTTATGTTAATCCTATTGGAACAATTGGGTTCCGACTTT ATCGTATGGGATAAAGTGGGATCGATGAACTTTGTGAAACCTGGAAAAGGGAAGGTGACGGCAACATTTTCGATCCCAGA AGAAAAAATCCAAAAGATCAGAGAAGAAATTGAAACAAAACGAAAGGGAGAGTTCCTCTTTACGACGAATGTTTTGGACG AAGAAAATGAGATCGTCGCAACTTTGGAGAAAACCATTTACATCCGAAAACGAGGAAGGTTGCCCATTCAGAATGTATAA
Upstream 100 bases:
>100_bases ATGAAGTGATCCAAGTCCCAGTGATTATAGGTGGTGGTTTGGCAATGTTAGCAGTTTATCTGATCAATTCGAAACATAAA AAGAAAGAAGAGATCATACC
Downstream 100 bases:
>100_bases TTCACATTCTAAGGAGTGATTGTTTCCTTCCCTTTCATCAAAATCAATTCATTGGACGATTGTATCTGAGATACTTTCGT TAATACTTTTTATCTTCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MKQISWKKCFKIWLYNFYPPYLGAGIRITQIATDLSFFQVEMKLKFYNKNYVGVHFGGSLYSMCDPFFMLILLEQLGSDF IVWDKVGSMNFVKPGKGKVTATFSIPEEKIQKIREEIETKRKGEFLFTTNVLDEENEIVATLEKTIYIRKRGRLPIQNV
Sequences:
>Translated_159_residues MKQISWKKCFKIWLYNFYPPYLGAGIRITQIATDLSFFQVEMKLKFYNKNYVGVHFGGSLYSMCDPFFMLILLEQLGSDF IVWDKVGSMNFVKPGKGKVTATFSIPEEKIQKIREEIETKRKGEFLFTTNVLDEENEIVATLEKTIYIRKRGRLPIQNV >Mature_159_residues MKQISWKKCFKIWLYNFYPPYLGAGIRITQIATDLSFFQVEMKLKFYNKNYVGVHFGGSLYSMCDPFFMLILLEQLGSDF IVWDKVGSMNFVKPGKGKVTATFSIPEEKIQKIREEIETKRKGEFLFTTNVLDEENEIVATLEKTIYIRKRGRLPIQNV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18614; Mature: 18614
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQISWKKCFKIWLYNFYPPYLGAGIRITQIATDLSFFQVEMKLKFYNKNYVGVHFGGSL CCCCCHHHHHHHHHHHCCCHHHCCCEEEEHHHHHHEEEEEEEEEEEECCCEEEEEECCHH YSMCDPFFMLILLEQLGSDFIVWDKVGSMNFVKPGKGKVTATFSIPEEKIQKIREEIETK HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHH RKGEFLFTTNVLDEENEIVATLEKTIYIRKRGRLPIQNV HCCCEEEEECCCCCCCHHHHHHHHEEEEEECCCCCCCCC >Mature Secondary Structure MKQISWKKCFKIWLYNFYPPYLGAGIRITQIATDLSFFQVEMKLKFYNKNYVGVHFGGSL CCCCCHHHHHHHHHHHCCCHHHCCCEEEEHHHHHHEEEEEEEEEEEECCCEEEEEECCHH YSMCDPFFMLILLEQLGSDFIVWDKVGSMNFVKPGKGKVTATFSIPEEKIQKIREEIETK HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHH RKGEFLFTTNVLDEENEIVATLEKTIYIRKRGRLPIQNV HCCCEEEEECCCCCCCHHHHHHHHEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA