| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219630
Identifier: 183219630
GI number: 183219630
Start: 199828
End: 200433
Strand: Direct
Name: 183219630
Synonym: LEPBI_I0205
Alternate gene names: NA
Gene position: 199828-200433 (Clockwise)
Preceding gene: 183219624
Following gene: 183219631
Centisome position: 5.55
GC content: 37.29
Gene sequence:
>606_bases ATGAAAATTTTTTATTCTTTTTTAGCACTATTGATGGTCGGTAGTTTCGGGTCAATTGATGCACAAGAAAATTGTGTTTT TGAGTATGATCCTTCCCAAACGAGTTTAGAATGGACGGCGTTCAAATTTACAGAAAAAACAGGTGTTAAAGGTAAGTTTG ATTCCATTCGAGTGGTAGGAAAAACAAAAGACAAATCAAAGTTTGGTGTCGCTGAGAAAATCCGATTCCAAATAGACAGT TCGTCCGTCAATTCTGCAAATCCCGATCGAGATGCCAAAATTAAAAAGTTTTTCTTTGGATCTGTGAAAGGAAACCAAAA GTTAATGGGAAACTTTTCTGAAATGACAGTTGGAGAAACAGGTACGGCAAAACTCAACCTACAATTTGGAAAATCCAAAA CATCTGTTCCAGTCAATTTTGTTTGGAAAGAAAATACAGTGGAAGTCACAGGTACTGTGGACGTGGCCTCTCTTGGTTTG GCACAAGGTTTGGGAAAATTGAATGCAGAGTGTAACGATTTGCATAAAGGTGCAGATGGCGTGAGTAAACTTTGGCCCAC AGTTGATGTAAAAGTCGTGTCTACTTTGAAAAAAACATGTAAATAA
Upstream 100 bases:
>100_bases AACGATTGTAATAATTTTAACATGTGAATTTTATTTCGTGCTTTAGACTCCTCTTGACAAAACTTTGTTTTTGATTTTCC ATCATTCAGCAGAGGTTTCT
Downstream 100 bases:
>100_bases AATGAATTGTTGGCCGACGATTCGCATAACGATGATTAACAAAGAGTAGTTCTTTCAGTAGGAAGGAAAGTCGATGGAAC AAGATATCAAAGCCAATCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MKIFYSFLALLMVGSFGSIDAQENCVFEYDPSQTSLEWTAFKFTEKTGVKGKFDSIRVVGKTKDKSKFGVAEKIRFQIDS SSVNSANPDRDAKIKKFFFGSVKGNQKLMGNFSEMTVGETGTAKLNLQFGKSKTSVPVNFVWKENTVEVTGTVDVASLGL AQGLGKLNAECNDLHKGADGVSKLWPTVDVKVVSTLKKTCK
Sequences:
>Translated_201_residues MKIFYSFLALLMVGSFGSIDAQENCVFEYDPSQTSLEWTAFKFTEKTGVKGKFDSIRVVGKTKDKSKFGVAEKIRFQIDS SSVNSANPDRDAKIKKFFFGSVKGNQKLMGNFSEMTVGETGTAKLNLQFGKSKTSVPVNFVWKENTVEVTGTVDVASLGL AQGLGKLNAECNDLHKGADGVSKLWPTVDVKVVSTLKKTCK >Mature_201_residues MKIFYSFLALLMVGSFGSIDAQENCVFEYDPSQTSLEWTAFKFTEKTGVKGKFDSIRVVGKTKDKSKFGVAEKIRFQIDS SSVNSANPDRDAKIKKFFFGSVKGNQKLMGNFSEMTVGETGTAKLNLQFGKSKTSVPVNFVWKENTVEVTGTVDVASLGL AQGLGKLNAECNDLHKGADGVSKLWPTVDVKVVSTLKKTCK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21976; Mature: 21976
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIFYSFLALLMVGSFGSIDAQENCVFEYDPSQTSLEWTAFKFTEKTGVKGKFDSIRVVG CHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCCCCCCCCCCEEEEE KTKDKSKFGVAEKIRFQIDSSSVNSANPDRDAKIKKFFFGSVKGNQKLMGNFSEMTVGET CCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCHHHHCCHHHEEECCC GTAKLNLQFGKSKTSVPVNFVWKENTVEVTGTVDVASLGLAQGLGKLNAECNDLHKGADG CCEEEEEEECCCCCCCCEEEEEECCEEEEEECCHHHHHHHHHHHHHCCCCHHHHHCCCCC VSKLWPTVDVKVVSTLKKTCK HHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure MKIFYSFLALLMVGSFGSIDAQENCVFEYDPSQTSLEWTAFKFTEKTGVKGKFDSIRVVG CHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCCCCCCCCCCEEEEE KTKDKSKFGVAEKIRFQIDSSSVNSANPDRDAKIKKFFFGSVKGNQKLMGNFSEMTVGET CCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCHHHHCCHHHEEECCC GTAKLNLQFGKSKTSVPVNFVWKENTVEVTGTVDVASLGLAQGLGKLNAECNDLHKGADG CCEEEEEEECCCCCCCCEEEEEECCEEEEEECCHHHHHHHHHHHHHCCCCHHHHHCCCCC VSKLWPTVDVKVVSTLKKTCK HHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA