| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219619
Identifier: 183219619
GI number: 183219619
Start: 188375
End: 189454
Strand: Direct
Name: 183219619
Synonym: LEPBI_I0194
Alternate gene names: NA
Gene position: 188375-189454 (Clockwise)
Preceding gene: 183219618
Following gene: 183219620
Centisome position: 5.23
GC content: 41.02
Gene sequence:
>1080_bases ATGAAAGTTGCTATTATACATGATTGGCTTACGGGTATGCGCGGTGGAGAAGTTGTTCTTGATAGTATGTTAAAGGCCTA TCCTGAAGCTGATTTGTTTAGTTTGTTTTATCAAAAAGGAAAACTCAACGCACGGATAGAAGATCGAAAGATCACAACCG CGTTTACTAACAACCTCCCATTCAAAAAAAAATACTATCGGTATTATCTGCCGTTATTTCCCACAGCCATCGAATCACTT GATTTAAAAGGATACGATGTGGTGATCAGTTCTTCTCACTGTGTTGCCAAAGGGGTGATCCCACACCCGGACACGTTTCA TTTGAGTTATGTACATAGCCCAATGCGTTATGTTTGGGATATGTATTATGATTATTTTCCAGCAAGGAAAGGGTTTAAAT TTTTTCTTTTACAATCCATTGCTAATTATCTCCGAACTTGGGATGCAGCATCTGCCAATCGTGTTGATTTTTTTACATGT AACTCGCATTTTGTGGGACGAAGGATTCAAAAATACTACCGTCGCGATTATAAGATCATTTACCCACCTTGTTTGCCACA AGACTTTCGTGTGCATGACAATTCCAAAGATGATTATTATCTCATGGTCTCTGCCTTTGCTCCTTATAAAAAAATTGACC TTGCGATTGAAGCGTTTCGGGAAAATGGAAAACCACTCATTCTTGTGGGTGGTGGCCAAGAAGAAGGAAAACTAGTGAAA AATCTCCCAAAAAACATCCTATGGAAAAAAGGTCTACCACGCCCAGAAGTGATCGAACTCTACAAAAAGGCTCGTGGTTT CATCTTTCCGGGGATGGAAGACTTCGGGATCACCCCCGTGGAATCGCAGGCCTATGCCACACCCGTCATTGCCTATGGGA AAGGTGGGGCCTTGGAATCGGTCAAAGAGGGGAAAACTGGTGTGTTTTTCCAAGAACAGACAGTTAAATCCTTAAATGAG GCCATCAAACGTGCCGAAAAAACCCAATTCAAACGTTGGGATTTCCAAAATTCCATCAATCGATTCACGGAAGAAAAATT CGTAAGCGAAATTCGAAAGGTAGTCGATAGACATAAATAG
Upstream 100 bases:
>100_bases GAAATTTAGAGAACACCATGCCAATTCCATTTTTAATTACAGCATCATATTACGGCCGTACAACGCCAATTACAGGAAGA AGGATAGGACCACAGGATTA
Downstream 100 bases:
>100_bases AAATCTCTGAAGGGGGATCTCTTGGTCATTTTACATCGACTCAAAGGTGCGGAATTTGTTCTCAATGCAGATTTAATTGA GACCATTGAAGCAAATCCAG
Product: putative glycosyl transferase
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase; Mannosyltransferase; Glycosyl Transferase Group 1 Protein; First Mannosyl Transferase; Mannosyl Transferase; Glycosyltransferase Protein; Glycosyl Transferase Group 1 Family; Glycosyltransferase Group 1 Family Protein; Lipopolysaccharide Biosynthesys-Related Glycosyltransferase; First Mannosyl Transferase WbaZ; Group 1 Family Glycosyltransferase; Glycosyltransferase Family 4 Domain Protein; First Mannosyl Transferase O- Antigen Biosynthesis; Aldehyde Dehydrogenase; Glycosyl Transferase Family Protein; Mannose-1-Phosphate Guanylyltransferase
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MKVAIIHDWLTGMRGGEVVLDSMLKAYPEADLFSLFYQKGKLNARIEDRKITTAFTNNLPFKKKYYRYYLPLFPTAIESL DLKGYDVVISSSHCVAKGVIPHPDTFHLSYVHSPMRYVWDMYYDYFPARKGFKFFLLQSIANYLRTWDAASANRVDFFTC NSHFVGRRIQKYYRRDYKIIYPPCLPQDFRVHDNSKDDYYLMVSAFAPYKKIDLAIEAFRENGKPLILVGGGQEEGKLVK NLPKNILWKKGLPRPEVIELYKKARGFIFPGMEDFGITPVESQAYATPVIAYGKGGALESVKEGKTGVFFQEQTVKSLNE AIKRAEKTQFKRWDFQNSINRFTEEKFVSEIRKVVDRHK
Sequences:
>Translated_359_residues MKVAIIHDWLTGMRGGEVVLDSMLKAYPEADLFSLFYQKGKLNARIEDRKITTAFTNNLPFKKKYYRYYLPLFPTAIESL DLKGYDVVISSSHCVAKGVIPHPDTFHLSYVHSPMRYVWDMYYDYFPARKGFKFFLLQSIANYLRTWDAASANRVDFFTC NSHFVGRRIQKYYRRDYKIIYPPCLPQDFRVHDNSKDDYYLMVSAFAPYKKIDLAIEAFRENGKPLILVGGGQEEGKLVK NLPKNILWKKGLPRPEVIELYKKARGFIFPGMEDFGITPVESQAYATPVIAYGKGGALESVKEGKTGVFFQEQTVKSLNE AIKRAEKTQFKRWDFQNSINRFTEEKFVSEIRKVVDRHK >Mature_359_residues MKVAIIHDWLTGMRGGEVVLDSMLKAYPEADLFSLFYQKGKLNARIEDRKITTAFTNNLPFKKKYYRYYLPLFPTAIESL DLKGYDVVISSSHCVAKGVIPHPDTFHLSYVHSPMRYVWDMYYDYFPARKGFKFFLLQSIANYLRTWDAASANRVDFFTC NSHFVGRRIQKYYRRDYKIIYPPCLPQDFRVHDNSKDDYYLMVSAFAPYKKIDLAIEAFRENGKPLILVGGGQEEGKLVK NLPKNILWKKGLPRPEVIELYKKARGFIFPGMEDFGITPVESQAYATPVIAYGKGGALESVKEGKTGVFFQEQTVKSLNE AIKRAEKTQFKRWDFQNSINRFTEEKFVSEIRKVVDRHK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41764; Mature: 41764
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: PS00300 SRP54
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVAIIHDWLTGMRGGEVVLDSMLKAYPEADLFSLFYQKGKLNARIEDRKITTAFTNNLP CEEEEEEHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEECCEEEEEECCCCC FKKKYYRYYLPLFPTAIESLDLKGYDVVISSSHCVAKGVIPHPDTFHLSYVHSPMRYVWD CCHHHHEEECCHHHHHHHHCCCCCEEEEEECCCEEEECCCCCCCCEEEHHHHHHHHHHHH MYYDYFPARKGFKFFLLQSIANYLRTWDAASANRVDFFTCNSHFVGRRIQKYYRRDYKII HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEE YPPCLPQDFRVHDNSKDDYYLMVSAFAPYKKIDLAIEAFRENGKPLILVGGGQEEGKLVK ECCCCCCCCEECCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHH NLPKNILWKKGLPRPEVIELYKKARGFIFPGMEDFGITPVESQAYATPVIAYGKGGALES HCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCEEEECCCCCHHH VKEGKTGVFFQEQTVKSLNEAIKRAEKTQFKRWDFQNSINRFTEEKFVSEIRKVVDRHK HHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKVAIIHDWLTGMRGGEVVLDSMLKAYPEADLFSLFYQKGKLNARIEDRKITTAFTNNLP CEEEEEEHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEECCEEEEEECCCCC FKKKYYRYYLPLFPTAIESLDLKGYDVVISSSHCVAKGVIPHPDTFHLSYVHSPMRYVWD CCHHHHEEECCHHHHHHHHCCCCCEEEEEECCCEEEECCCCCCCCEEEHHHHHHHHHHHH MYYDYFPARKGFKFFLLQSIANYLRTWDAASANRVDFFTCNSHFVGRRIQKYYRRDYKII HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEE YPPCLPQDFRVHDNSKDDYYLMVSAFAPYKKIDLAIEAFRENGKPLILVGGGQEEGKLVK ECCCCCCCCEECCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHH NLPKNILWKKGLPRPEVIELYKKARGFIFPGMEDFGITPVESQAYATPVIAYGKGGALES HCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCEEEECCCCCHHH VKEGKTGVFFQEQTVKSLNEAIKRAEKTQFKRWDFQNSINRFTEEKFVSEIRKVVDRHK HHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA