| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219551
Identifier: 183219551
GI number: 183219551
Start: 125446
End: 126105
Strand: Direct
Name: 183219551
Synonym: LEPBI_I0124
Alternate gene names: NA
Gene position: 125446-126105 (Clockwise)
Preceding gene: 183219549
Following gene: 183219552
Centisome position: 3.48
GC content: 43.94
Gene sequence:
>660_bases ATGCGTTTTCTGTTCTTTGCATTCGTTTTCCTTTGTTTCCAATGCTCACCTTCTGAACTCAATAATCCAAGTGATTTTAA ATCCGACTCTTTCCGTGAAAGCGAAACGATCCTTTGCCTCACAGGGCAAACCTCTGCTTGCCAATTGGCGATTCCAGTTT GTACCACTTGTCGGTTTTTTTCCACAAGCATCGCCTATAATGGGAACCGAGGGGGGATTGTGGGAGCGGATGCCAAATGT ATGAGTGATTCGAAAAAACCTACGGAGCCAGCAAGAGCCGTTTTCAAAGCATTCCTTGTGGATGATGTGAACCGGATTGC TTGTACGACATCGAATTGTAGTGGTGGCGTATCAGAACATACGGATTGGATTTTAAAGCCAAATACAACTTATAAAAGGG CAGTGGATGGAGTTACCATAGTGACTACGAATGGTGAGGGAATCTTTTCTACCCAACCAGGTGATGCAGAAGTTTCAACT GTTAATAATATCTTAACTGGATTCTTTGCAAGTGGTTGGACCACTCGTTCCAGTGGGCACTGTAGTCGATGGTCAGATGA TTCAGTCGCAATCACGGGTCATTCTTCGAGTAATAATTTGTTTACCACTGGTGGTGGAGGTTGCAATATTTCTTCCGTCA TCCTGTGTGTGGAACAGTAA
Upstream 100 bases:
>100_bases CAAACTTTGTTTTCATTCCAAATTTTGAATTTACTAAAAATGATTCAGTACCAGCTGATTTATTGGTTGCTATGGATGCA TAAGGGTTTATCATTCATGA
Downstream 100 bases:
>100_bases AATCAGTTTTGTATTTCTTTTTTTAATTCTATTTTGTCTAACTTGGATTCTTTGTTTTATCCCCCAAATTCGAGTGTATC TTCCCAAGGGAAAACTTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MRFLFFAFVFLCFQCSPSELNNPSDFKSDSFRESETILCLTGQTSACQLAIPVCTTCRFFSTSIAYNGNRGGIVGADAKC MSDSKKPTEPARAVFKAFLVDDVNRIACTTSNCSGGVSEHTDWILKPNTTYKRAVDGVTIVTTNGEGIFSTQPGDAEVST VNNILTGFFASGWTTRSSGHCSRWSDDSVAITGHSSSNNLFTTGGGGCNISSVILCVEQ
Sequences:
>Translated_219_residues MRFLFFAFVFLCFQCSPSELNNPSDFKSDSFRESETILCLTGQTSACQLAIPVCTTCRFFSTSIAYNGNRGGIVGADAKC MSDSKKPTEPARAVFKAFLVDDVNRIACTTSNCSGGVSEHTDWILKPNTTYKRAVDGVTIVTTNGEGIFSTQPGDAEVST VNNILTGFFASGWTTRSSGHCSRWSDDSVAITGHSSSNNLFTTGGGGCNISSVILCVEQ >Mature_219_residues MRFLFFAFVFLCFQCSPSELNNPSDFKSDSFRESETILCLTGQTSACQLAIPVCTTCRFFSTSIAYNGNRGGIVGADAKC MSDSKKPTEPARAVFKAFLVDDVNRIACTTSNCSGGVSEHTDWILKPNTTYKRAVDGVTIVTTNGEGIFSTQPGDAEVST VNNILTGFFASGWTTRSSGHCSRWSDDSVAITGHSSSNNLFTTGGGGCNISSVILCVEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23420; Mature: 23420
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 5.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFLFFAFVFLCFQCSPSELNNPSDFKSDSFRESETILCLTGQTSACQLAIPVCTTCRFF CHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECHHHHHHHH STSIAYNGNRGGIVGADAKCMSDSKKPTEPARAVFKAFLVDDVNRIACTTSNCSGGVSEH EEEEEEECCCCCEECCCCHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC TDWILKPNTTYKRAVDGVTIVTTNGEGIFSTQPGDAEVSTVNNILTGFFASGWTTRSSGH CCEEECCCCHHHHHCCCEEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCC CSRWSDDSVAITGHSSSNNLFTTGGGGCNISSVILCVEQ CCCCCCCCEEEEECCCCCCEEEECCCCCCCEEEEEEEEC >Mature Secondary Structure MRFLFFAFVFLCFQCSPSELNNPSDFKSDSFRESETILCLTGQTSACQLAIPVCTTCRFF CHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECHHHHHHHH STSIAYNGNRGGIVGADAKCMSDSKKPTEPARAVFKAFLVDDVNRIACTTSNCSGGVSEH EEEEEEECCCCCEECCCCHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC TDWILKPNTTYKRAVDGVTIVTTNGEGIFSTQPGDAEVSTVNNILTGFFASGWTTRSSGH CCEEECCCCHHHHHCCCEEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCC CSRWSDDSVAITGHSSSNNLFTTGGGGCNISSVILCVEQ CCCCCCCCEEEEECCCCCCEEEECCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA