Click here to switch to the map view.

The map label for this gene is yiaA [H]

Identifier: 183219548

GI number: 183219548

Start: 124037

End: 124474

Strand: Reverse

Name: yiaA [H]

Synonym: LEPBI_I0121

Alternate gene names: 183219548

Gene position: 124474-124037 (Counterclockwise)

Preceding gene: 183219550

Following gene: 183219547

Centisome position: 3.46

GC content: 36.07

Gene sequence:

>438_bases
ATGATCGCACAACCGCAAAAACCCTCAGCAGCATTCATTGGAGCTTCTTGGTTATCTCTTCTCATCGGAATGTTCACTTT
CATCATTGGAATTTGGAATTCGGATATGATGTTAAACGAAAAAGGATTTTACATCACCATCTTAATGTATGGATTGTTTT
CAGCCGTTTCCTTACAAAAAACAGTAAGGGACCAATTAGAAGGACTATTTGTCACAAACATCTACATCGGTCTTTGTTGG
TTTTCAGTCGCCTTAACCTTGTTATTGTTATTCATAGGGTTATGGAATGCCACTTTAAACTTGAGTGAAAAAGGATTCTT
TGGAATTTCATTTGTTTTAAGTTTATTTGCAGCGGTTGCTGTCCAAAAAAATGTCCGTGATTTACGAATGGCAGAAGGAG
ATATCAAACCAGAATTATCTCCTAAAAAACCAAACTAA

Upstream 100 bases:

>100_bases
TGAATCAATCATGATCAGAAGTGACATGATCCAAAAGAAAGACTCAATATCGTGATACAAAATTCTTGACGAATCTAAAA
TAATACTTACTACTTCTGAA

Downstream 100 bases:

>100_bases
TCTTCAGAACGTCCATTCACTGGGAAAATCAAATACAGAGGAAAAACCATGAGAAAATTAATCATGTGGAATGTGATCAC
TTTGGATGGATACTTTGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MIAQPQKPSAAFIGASWLSLLIGMFTFIIGIWNSDMMLNEKGFYITILMYGLFSAVSLQKTVRDQLEGLFVTNIYIGLCW
FSVALTLLLLFIGLWNATLNLSEKGFFGISFVLSLFAAVAVQKNVRDLRMAEGDIKPELSPKKPN

Sequences:

>Translated_145_residues
MIAQPQKPSAAFIGASWLSLLIGMFTFIIGIWNSDMMLNEKGFYITILMYGLFSAVSLQKTVRDQLEGLFVTNIYIGLCW
FSVALTLLLLFIGLWNATLNLSEKGFFGISFVLSLFAAVAVQKNVRDLRMAEGDIKPELSPKKPN
>Mature_145_residues
MIAQPQKPSAAFIGASWLSLLIGMFTFIIGIWNSDMMLNEKGFYITILMYGLFSAVSLQKTVRDQLEGLFVTNIYIGLCW
FSVALTLLLLFIGLWNATLNLSEKGFFGISFVLSLFAAVAVQKNVRDLRMAEGDIKPELSPKKPN

Specific function: Unknown

COG id: COG4682

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082292, Length=119, Percent_Identity=56.3025210084034, Blast_Score=139, Evalue=5e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008024 [H]

Pfam domain/function: PF05360 YiaAB [H]

EC number: NA

Molecular weight: Translated: 16161; Mature: 16161

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAQPQKPSAAFIGASWLSLLIGMFTFIIGIWNSDMMLNEKGFYITILMYGLFSAVSLQK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHH
TVRDQLEGLFVTNIYIGLCWFSVALTLLLLFIGLWNATLNLSEKGFFGISFVLSLFAAVA
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
VQKNVRDLRMAEGDIKPELSPKKPN
HHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MIAQPQKPSAAFIGASWLSLLIGMFTFIIGIWNSDMMLNEKGFYITILMYGLFSAVSLQK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHH
TVRDQLEGLFVTNIYIGLCWFSVALTLLLLFIGLWNATLNLSEKGFFGISFVLSLFAAVA
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
VQKNVRDLRMAEGDIKPELSPKKPN
HHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 6320721; 8041620; 9278503 [H]