Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183219538
Identifier: 183219538
GI number: 183219538
Start: 113710
End: 114876
Strand: Reverse
Name: 183219538
Synonym: LEPBI_I0111
Alternate gene names: NA
Gene position: 114876-113710 (Counterclockwise)
Preceding gene: 183219539
Following gene: 183219527
Centisome position: 3.19
GC content: 40.62
Gene sequence:
>1167_bases ATGTTTCGATTTCTGACTGCTTCCTTTTTAGGATTTTTAGCAGGTCACCTAACAAACTATAGTGTGATTTTATATGCACA GGATGTATGGAACCAAGATGCATTGGCAGGAATCGGATTTGGGTTATGTTTTGGTGTTCCTTTGTTTCTAGGATGGTTTG CAGGTGCATGGTGTGATTCGCATTCTCCACAAATTTTAGCCCAACTTGCCCATGTTTCCTTTTTAATCGCACTTGGACTT TTGCATCTGTCTTCAGAGTTGGATGGTATTAGTTCCGTTTCCCTGTTTTTACTTGGTGCATTTTTTGTTGGCGTGGGTTG GTCCATACTTGCGCCTGCAAGGATGTCGCTTCTTGGAAGACTTGCAGGAGAAAAACAGAAAAAAATGGCCGTTATTTTTA ATGTTTTAGTGATGTTAGGTTTTGGGTCAGCTCCTCCTATCTTAGCATTTTGCAAAAATATCGGGTCTTGGAAGATGGTC CACTTAACTGGCGTTCTCTTGTTTTTAATTGCGATGGGGCTTTTGATTGGAATCAAAACAGAAGGACAAGGTAAAACCTC TTCTGCATGGGATCGAATCCTTAGAGGAGTATCGTATGCTAAAAATCATAACTTACTCAAACAAACTCTCCTCTTTTCGA TCGTCATTTATTGTTCAATGGGACCTGTGCAAGTGATGATGCCAAGGTATGCCAAAGGAGTTTTAAATTTAGGAGAGATG GAACGAGGGTTCTTTTTAGGCGCACTGGCACTCGCTCTCCTTATTGGTGGTGGTACTTCTTTAAAATTAGCAAAACCGTT TGGCTATGGAAAATTGATACTCACTTCAGGATTCATTTGTGGTCTTGGCCTACTTGGCATCGGTATTAGCTCCCATTTTT GGATCTCGATTGGATTATTATTTTTAAGTGGATTTGGTGCTGGAGCCAGTATTAGTTTGCTTGTCGCGATCTTACAATCA GAGGTGAGTCCCGAATACCGAGGTAGGTTAATGAGTTTGTATACGATCACAAGTCAGGTTGTTCCTGCATTTGCAGGACT ACTCTCAGGACTCATTCTTGTCAAAGTATCGATTGCGACAGCCGTAATCAGCGCAGGTATAATTTTAACTCTGATTGTGA TGATGACCACAATCAGATTAAAAACATTACGAAATTATACGATGTGA
Upstream 100 bases:
>100_bases ATGGAGCCTTCCCAAGTTGGCACATTGAAGACGGCCAACCAACGTTAATGGAAGTCACACAATCAAAATGAACCAATCAA ATGTTTACAATAAGGGACAG
Downstream 100 bases:
>100_bases TTTACCACTGTTGGTACATTTGTTCTGCAAATCCAAATAGATTTTTGACTTCTAATTTAGTGCCATTGTCTAATATCACA TAACCACTGTATGTACCGAA
Product: putative signal peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MFRFLTASFLGFLAGHLTNYSVILYAQDVWNQDALAGIGFGLCFGVPLFLGWFAGAWCDSHSPQILAQLAHVSFLIALGL LHLSSELDGISSVSLFLLGAFFVGVGWSILAPARMSLLGRLAGEKQKKMAVIFNVLVMLGFGSAPPILAFCKNIGSWKMV HLTGVLLFLIAMGLLIGIKTEGQGKTSSAWDRILRGVSYAKNHNLLKQTLLFSIVIYCSMGPVQVMMPRYAKGVLNLGEM ERGFFLGALALALLIGGGTSLKLAKPFGYGKLILTSGFICGLGLLGIGISSHFWISIGLLFLSGFGAGASISLLVAILQS EVSPEYRGRLMSLYTITSQVVPAFAGLLSGLILVKVSIATAVISAGIILTLIVMMTTIRLKTLRNYTM
Sequences:
>Translated_388_residues MFRFLTASFLGFLAGHLTNYSVILYAQDVWNQDALAGIGFGLCFGVPLFLGWFAGAWCDSHSPQILAQLAHVSFLIALGL LHLSSELDGISSVSLFLLGAFFVGVGWSILAPARMSLLGRLAGEKQKKMAVIFNVLVMLGFGSAPPILAFCKNIGSWKMV HLTGVLLFLIAMGLLIGIKTEGQGKTSSAWDRILRGVSYAKNHNLLKQTLLFSIVIYCSMGPVQVMMPRYAKGVLNLGEM ERGFFLGALALALLIGGGTSLKLAKPFGYGKLILTSGFICGLGLLGIGISSHFWISIGLLFLSGFGAGASISLLVAILQS EVSPEYRGRLMSLYTITSQVVPAFAGLLSGLILVKVSIATAVISAGIILTLIVMMTTIRLKTLRNYTM >Mature_388_residues MFRFLTASFLGFLAGHLTNYSVILYAQDVWNQDALAGIGFGLCFGVPLFLGWFAGAWCDSHSPQILAQLAHVSFLIALGL LHLSSELDGISSVSLFLLGAFFVGVGWSILAPARMSLLGRLAGEKQKKMAVIFNVLVMLGFGSAPPILAFCKNIGSWKMV HLTGVLLFLIAMGLLIGIKTEGQGKTSSAWDRILRGVSYAKNHNLLKQTLLFSIVIYCSMGPVQVMMPRYAKGVLNLGEM ERGFFLGALALALLIGGGTSLKLAKPFGYGKLILTSGFICGLGLLGIGISSHFWISIGLLFLSGFGAGASISLLVAILQS EVSPEYRGRLMSLYTITSQVVPAFAGLLSGLILVKVSIATAVISAGIILTLIVMMTTIRLKTLRNYTM
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41467; Mature: 41467
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRFLTASFLGFLAGHLTNYSVILYAQDVWNQDALAGIGFGLCFGVPLFLGWFAGAWCDS CCHHHHHHHHHHHHHHHCCCEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC HSPQILAQLAHVSFLIALGLLHLSSELDGISSVSLFLLGAFFVGVGWSILAPARMSLLGR CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LAGEKQKKMAVIFNVLVMLGFGSAPPILAFCKNIGSWKMVHLTGVLLFLIAMGLLIGIKT HHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC EGQGKTSSAWDRILRGVSYAKNHNLLKQTLLFSIVIYCSMGPVQVMMPRYAKGVLNLGEM CCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHH ERGFFLGALALALLIGGGTSLKLAKPFGYGKLILTSGFICGLGLLGIGISSHFWISIGLL HHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHCCHHHHHHHHHHCCCHHHHHHHHHH FLSGFGAGASISLLVAILQSEVSPEYRGRLMSLYTITSQVVPAFAGLLSGLILVKVSIAT HHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVISAGIILTLIVMMTTIRLKTLRNYTM HHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFRFLTASFLGFLAGHLTNYSVILYAQDVWNQDALAGIGFGLCFGVPLFLGWFAGAWCDS CCHHHHHHHHHHHHHHHCCCEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC HSPQILAQLAHVSFLIALGLLHLSSELDGISSVSLFLLGAFFVGVGWSILAPARMSLLGR CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LAGEKQKKMAVIFNVLVMLGFGSAPPILAFCKNIGSWKMVHLTGVLLFLIAMGLLIGIKT HHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC EGQGKTSSAWDRILRGVSYAKNHNLLKQTLLFSIVIYCSMGPVQVMMPRYAKGVLNLGEM CCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHH ERGFFLGALALALLIGGGTSLKLAKPFGYGKLILTSGFICGLGLLGIGISSHFWISIGLL HHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHCCHHHHHHHHHHCCCHHHHHHHHHH FLSGFGAGASISLLVAILQSEVSPEYRGRLMSLYTITSQVVPAFAGLLSGLILVKVSIAT HHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVISAGIILTLIVMMTTIRLKTLRNYTM HHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA