Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183219528
Identifier: 183219528
GI number: 183219528
Start: 102190
End: 102801
Strand: Direct
Name: 183219528
Synonym: LEPBI_I0101
Alternate gene names: NA
Gene position: 102190-102801 (Clockwise)
Preceding gene: 183219526
Following gene: 183219529
Centisome position: 2.84
GC content: 37.42
Gene sequence:
>612_bases ATGAATATTCATTCATTAATTTGTGAGTGGAAATACGGACTAAGAATGGCAATTTTGGATCAAAAGTTTATTTCAAGGCG AACTGTTGTCAAAACTTCATTGTTTGGGGCTGCCTTTTTGTACTTATCTACGAGCGGTTGTAAAACCGGTGGGACTGTCT CTTTATCCAACCGTGGCTTAGGATGTTCCTTTTTGGACCCAAAAGCCGAGGATTACTTTTTTTACTTATGTGAATCCTTG TTATTCACCTTTCTTCCGAAAGACCAAAAGGAAAAGGAGAAAGTTTTGGGCGAAGTTGTTCTCGGAATTGATTCCTATTT ATCTGCTTTACCATCTCATACCCAGGCTGAAATCACCGAAGCAATCCAGTTTTTAAATTTAGGTATTGTTAGGTGGTATG TGTTTGGTTCAAGTTCGAATTGGGAAGATTCCAATCGCGAAAGTGTAATCAAATCTTTAAATCAATGGAAGATGTCATCG ATCAGTCTACTTCGATCCATTTTCTTTTTATTACAATCGATGGTAACGATTGGATTTTTTGAAAACAGTTACTCATGGAA ACATGTTGGTTACCCAGGGCCAAAACACGCATTAGGATTAAGACATGGATAA
Upstream 100 bases:
>100_bases TTGATAAGGGACGTTCATTTTTGGATAGGGGTCATAGATACCCCCAATCCAATTCTTTTCATTCTTTTTTTAAAAAAGTA CTTGTAAAGTAAAAAAAGGA
Downstream 100 bases:
>100_bases ACTGATCGATGTATCATATTTAAAGAAAGATTTAGATTTAGAAGCGGACTTTGTGATTGTTGGGTCAGGTGCTGGTGGAG GAACCAGTGCTGAGATTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MNIHSLICEWKYGLRMAILDQKFISRRTVVKTSLFGAAFLYLSTSGCKTGGTVSLSNRGLGCSFLDPKAEDYFFYLCESL LFTFLPKDQKEKEKVLGEVVLGIDSYLSALPSHTQAEITEAIQFLNLGIVRWYVFGSSSNWEDSNRESVIKSLNQWKMSS ISLLRSIFFLLQSMVTIGFFENSYSWKHVGYPGPKHALGLRHG
Sequences:
>Translated_203_residues MNIHSLICEWKYGLRMAILDQKFISRRTVVKTSLFGAAFLYLSTSGCKTGGTVSLSNRGLGCSFLDPKAEDYFFYLCESL LFTFLPKDQKEKEKVLGEVVLGIDSYLSALPSHTQAEITEAIQFLNLGIVRWYVFGSSSNWEDSNRESVIKSLNQWKMSS ISLLRSIFFLLQSMVTIGFFENSYSWKHVGYPGPKHALGLRHG >Mature_203_residues MNIHSLICEWKYGLRMAILDQKFISRRTVVKTSLFGAAFLYLSTSGCKTGGTVSLSNRGLGCSFLDPKAEDYFFYLCESL LFTFLPKDQKEKEKVLGEVVLGIDSYLSALPSHTQAEITEAIQFLNLGIVRWYVFGSSSNWEDSNRESVIKSLNQWKMSS ISLLRSIFFLLQSMVTIGFFENSYSWKHVGYPGPKHALGLRHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22977; Mature: 22977
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIHSLICEWKYGLRMAILDQKFISRRTVVKTSLFGAAFLYLSTSGCKTGGTVSLSNRGL CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEECCCCC GCSFLDPKAEDYFFYLCESLLFTFLPKDQKEKEKVLGEVVLGIDSYLSALPSHTQAEITE CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH AIQFLNLGIVRWYVFGSSSNWEDSNRESVIKSLNQWKMSSISLLRSIFFLLQSMVTIGFF HHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENSYSWKHVGYPGPKHALGLRHG CCCCCCCCCCCCCCHHCCCCCCC >Mature Secondary Structure MNIHSLICEWKYGLRMAILDQKFISRRTVVKTSLFGAAFLYLSTSGCKTGGTVSLSNRGL CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEECCCCC GCSFLDPKAEDYFFYLCESLLFTFLPKDQKEKEKVLGEVVLGIDSYLSALPSHTQAEITE CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH AIQFLNLGIVRWYVFGSSSNWEDSNRESVIKSLNQWKMSSISLLRSIFFLLQSMVTIGFF HHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENSYSWKHVGYPGPKHALGLRHG CCCCCCCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA