Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is hflX [H]
Identifier: 183219489
GI number: 183219489
Start: 62138
End: 63694
Strand: Direct
Name: hflX [H]
Synonym: LEPBI_I0062
Alternate gene names: 183219489
Gene position: 62138-63694 (Clockwise)
Preceding gene: 183219487
Following gene: 183219492
Centisome position: 1.73
GC content: 41.23
Gene sequence:
>1557_bases ATGGAGCTTGCAAGGCTTGTCGGAGAGATATCTGTCGAAATGGGAAGGCAGGTAGGCCTCCTCATAGAGAGGACGGGTTA TGTCACTCATCTCATTGTCGGTAATGACCATTCCATCGAAATTCCCCATTTAGACCGCTATCGTGTCGCACATTCCAGGC TTCGTGGCCTTCGTTTGTTTCATACTCATCTCAAAGAACAGCCGTTAAACCAAGAAGACTTGATGGACCTTGTCCTCAAC CGATTTGATTCCATCACGGCCGCTTGTGTGGACAAAGAGGGAATCCCAAAATTCTTTTTTTCTGCCTTCATCAATCCAGA CCCAGATGCAAAAGAACCCTGGATCTTATCACCCAAACAATACCCTGGACAAATTAAGTATGGGTATTCAGAACAAGTAG ACGCACTCGAATCCGAATTCACTAAAAAGACATCCAACCTCAAAGAATCTCAAAAAGAAAATAGAGCTTTCCTTGTGGGA GTGTATGATGTGAGAAAAATGAAACGTTCTCCCGAACATTCTATGGATGAATTAAAAGAACTCTGTAGGACGGCTGGTAT TCATGTTGTGGATACCTATGTACAAAAAAGAGATCCTGATCCTAGGACAGTTGTGGGAAAAGGGAAATTACAAGAAATCA TTCTCACTTCGGTTCATAAAGACATAGAACATTTGATTTTTGATTTGGAACTCACTCCTTCCCAAGCTAAAAAAATCTCG GATGCAAGTGACTTAAAAATCATCGACCGAACCCAACTCATATTAGATATCTTTTCCAAAAATGCCAAGTCACGAGATGG AAAGTTACAAGTAGAACTTGCTCAGTTGAAATACCTTAAAAATCGACTCTCCGAGTTGGATGATAATATGAGTCGTCTAA CGGGTGGAATCGGTGGAAGGGGACCTGGGGAAACCAAATTAGAAATTGGAAACAGACGTGTTGAAGAAAAAATCAATCGT TTGGAAAATGAACTAAAGGATCTCAAACGAAGAAGGGAACTCAATCGTAAGTCTCGTTCTCGTAATGAAATTCCGATCGT GGGGATTGTGGGTTACACCAATGCAGGCAAATCAACCTTACTCAACGCCCTAACCAATTCCACAGTCATTGCCGAAGACA AACTTTTTGCCACTCTTGATCCCACTACGAGAAGGATCCGGTTTCCTGAGGAAAGAGAAATCATCATTTCCGATACGGTA GGATTCATCCATGATCTTCCTCCCGATCTGTCGCAAGCATTCAAAGCCACTTTAGAAGAATTAGGTGATGCCGACTTACT CTTACATGTAGTCGATGTCACCAATCCAAATTATACAGAACAAATGGATGCTGTTGATACCATTTTGAATTCACTTCATT TGAACGAGATTCCAAGAATGGTGGTGTTTAATAAAGCCGATGGACTGGATGAAGAAACACACGATATCTTACAAAAAAAT GGCGCCTTACTTGTGTCTGCTGTGACGAGAGAAGGCCTTTCCAAATTGTTAGATTTGATCGAGTATGAGATTTGGAAAAA GAAGGAACAAAAATTATTGGAAGTTACGTCCAGTTGA
Upstream 100 bases:
>100_bases AAGTAAAATTAGCGGCAACCTCGCTGGTCTCAAGCCAAACCAGCTAAAAAAGTTAAAATCTCTCTCAGAAAGGCGACTTC GAGAGGATTCTATCATCTCC
Downstream 100 bases:
>100_bases GGATGGCTTCCTCTTTTGTATGGTAAATCTGCACTTTTTTTGGAAGGTCCATCAGTTGGATCACATTTTCCAAAAAATGA TTTAGACCTCCAATCTTAAT
Product: GTP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 518; Mature: 518
Protein sequence:
>518_residues MELARLVGEISVEMGRQVGLLIERTGYVTHLIVGNDHSIEIPHLDRYRVAHSRLRGLRLFHTHLKEQPLNQEDLMDLVLN RFDSITAACVDKEGIPKFFFSAFINPDPDAKEPWILSPKQYPGQIKYGYSEQVDALESEFTKKTSNLKESQKENRAFLVG VYDVRKMKRSPEHSMDELKELCRTAGIHVVDTYVQKRDPDPRTVVGKGKLQEIILTSVHKDIEHLIFDLELTPSQAKKIS DASDLKIIDRTQLILDIFSKNAKSRDGKLQVELAQLKYLKNRLSELDDNMSRLTGGIGGRGPGETKLEIGNRRVEEKINR LENELKDLKRRRELNRKSRSRNEIPIVGIVGYTNAGKSTLLNALTNSTVIAEDKLFATLDPTTRRIRFPEEREIIISDTV GFIHDLPPDLSQAFKATLEELGDADLLLHVVDVTNPNYTEQMDAVDTILNSLHLNEIPRMVVFNKADGLDEETHDILQKN GALLVSAVTREGLSKLLDLIEYEIWKKKEQKLLEVTSS
Sequences:
>Translated_518_residues MELARLVGEISVEMGRQVGLLIERTGYVTHLIVGNDHSIEIPHLDRYRVAHSRLRGLRLFHTHLKEQPLNQEDLMDLVLN RFDSITAACVDKEGIPKFFFSAFINPDPDAKEPWILSPKQYPGQIKYGYSEQVDALESEFTKKTSNLKESQKENRAFLVG VYDVRKMKRSPEHSMDELKELCRTAGIHVVDTYVQKRDPDPRTVVGKGKLQEIILTSVHKDIEHLIFDLELTPSQAKKIS DASDLKIIDRTQLILDIFSKNAKSRDGKLQVELAQLKYLKNRLSELDDNMSRLTGGIGGRGPGETKLEIGNRRVEEKINR LENELKDLKRRRELNRKSRSRNEIPIVGIVGYTNAGKSTLLNALTNSTVIAEDKLFATLDPTTRRIRFPEEREIIISDTV GFIHDLPPDLSQAFKATLEELGDADLLLHVVDVTNPNYTEQMDAVDTILNSLHLNEIPRMVVFNKADGLDEETHDILQKN GALLVSAVTREGLSKLLDLIEYEIWKKKEQKLLEVTSS >Mature_518_residues MELARLVGEISVEMGRQVGLLIERTGYVTHLIVGNDHSIEIPHLDRYRVAHSRLRGLRLFHTHLKEQPLNQEDLMDLVLN RFDSITAACVDKEGIPKFFFSAFINPDPDAKEPWILSPKQYPGQIKYGYSEQVDALESEFTKKTSNLKESQKENRAFLVG VYDVRKMKRSPEHSMDELKELCRTAGIHVVDTYVQKRDPDPRTVVGKGKLQEIILTSVHKDIEHLIFDLELTPSQAKKIS DASDLKIIDRTQLILDIFSKNAKSRDGKLQVELAQLKYLKNRLSELDDNMSRLTGGIGGRGPGETKLEIGNRRVEEKINR LENELKDLKRRRELNRKSRSRNEIPIVGIVGYTNAGKSTLLNALTNSTVIAEDKLFATLDPTTRRIRFPEEREIIISDTV GFIHDLPPDLSQAFKATLEELGDADLLLHVVDVTNPNYTEQMDAVDTILNSLHLNEIPRMVVFNKADGLDEETHDILQKN GALLVSAVTREGLSKLLDLIEYEIWKKKEQKLLEVTSS
Specific function: Unknown
COG id: COG2262
COG function: function code R; GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI310133118, Length=242, Percent_Identity=34.297520661157, Blast_Score=125, Evalue=1e-28, Organism=Homo sapiens, GI310133116, Length=189, Percent_Identity=38.0952380952381, Blast_Score=123, Evalue=4e-28, Organism=Homo sapiens, GI310124269, Length=171, Percent_Identity=39.766081871345, Blast_Score=122, Evalue=1e-27, Organism=Homo sapiens, GI310124267, Length=171, Percent_Identity=39.766081871345, Blast_Score=122, Evalue=1e-27, Organism=Homo sapiens, GI310124171, Length=171, Percent_Identity=39.766081871345, Blast_Score=122, Evalue=1e-27, Organism=Homo sapiens, GI310124169, Length=171, Percent_Identity=39.766081871345, Blast_Score=122, Evalue=1e-27, Organism=Escherichia coli, GI1790615, Length=328, Percent_Identity=41.7682926829268, Blast_Score=249, Evalue=2e-67, Organism=Caenorhabditis elegans, GI17561038, Length=339, Percent_Identity=28.9085545722714, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI24650079, Length=319, Percent_Identity=33.8557993730408, Blast_Score=127, Evalue=1e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR016496 - InterPro: IPR006073 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 58897; Mature: 58897
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELARLVGEISVEMGRQVGLLIERTGYVTHLIVGNDHSIEIPHLDRYRVAHSRLRGLRLF CCHHHHHHHHHHHHCCHHCEEEEECCCEEEEEECCCCEEECCCCHHHHHHHHHHHHHHHH HTHLKEQPLNQEDLMDLVLNRFDSITAACVDKEGIPKFFFSAFINPDPDAKEPWILSPKQ HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEECCCC YPGQIKYGYSEQVDALESEFTKKTSNLKESQKENRAFLVGVYDVRKMKRSPEHSMDELKE CCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCCCCHHHHHHH LCRTAGIHVVDTYVQKRDPDPRTVVGKGKLQEIILTSVHKDIEHLIFDLELTPSQAKKIS HHHHCCCHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHEEEEECHHHHHHCC DASDLKIIDRTQLILDIFSKNAKSRDGKLQVELAQLKYLKNRLSELDDNMSRLTGGIGGR CCCCCEEHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GPGETKLEIGNRRVEEKINRLENELKDLKRRRELNRKSRSRNEIPIVGIVGYTNAGKSTL CCCCCEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHH LNALTNSTVIAEDKLFATLDPTTRRIRFPEEREIIISDTVGFIHDLPPDLSQAFKATLEE HHHHHCCEEEECCCEEEEECCCHHCCCCCCCCCEEEECCHHHHHCCCHHHHHHHHHHHHH LGDADLLLHVVDVTNPNYTEQMDAVDTILNSLHLNEIPRMVVFNKADGLDEETHDILQKN HCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCC GALLVSAVTREGLSKLLDLIEYEIWKKKEQKLLEVTSS CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MELARLVGEISVEMGRQVGLLIERTGYVTHLIVGNDHSIEIPHLDRYRVAHSRLRGLRLF CCHHHHHHHHHHHHCCHHCEEEEECCCEEEEEECCCCEEECCCCHHHHHHHHHHHHHHHH HTHLKEQPLNQEDLMDLVLNRFDSITAACVDKEGIPKFFFSAFINPDPDAKEPWILSPKQ HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEECCCC YPGQIKYGYSEQVDALESEFTKKTSNLKESQKENRAFLVGVYDVRKMKRSPEHSMDELKE CCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCCCCHHHHHHH LCRTAGIHVVDTYVQKRDPDPRTVVGKGKLQEIILTSVHKDIEHLIFDLELTPSQAKKIS HHHHCCCHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHEEEEECHHHHHHCC DASDLKIIDRTQLILDIFSKNAKSRDGKLQVELAQLKYLKNRLSELDDNMSRLTGGIGGR CCCCCEEHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GPGETKLEIGNRRVEEKINRLENELKDLKRRRELNRKSRSRNEIPIVGIVGYTNAGKSTL CCCCCEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHH LNALTNSTVIAEDKLFATLDPTTRRIRFPEEREIIISDTVGFIHDLPPDLSQAFKATLEE HHHHHCCEEEECCCEEEEECCCHHCCCCCCCCCEEEECCHHHHHCCCHHHHHHHHHHHHH LGDADLLLHVVDVTNPNYTEQMDAVDTILNSLHLNEIPRMVVFNKADGLDEETHDILQKN HCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCC GALLVSAVTREGLSKLLDLIEYEIWKKKEQKLLEVTSS CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8248183; 7610040; 9278503; 2020545; 3040675 [H]