| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219462
Identifier: 183219462
GI number: 183219462
Start: 35188
End: 36585
Strand: Direct
Name: 183219462
Synonym: LEPBI_I0035
Alternate gene names: NA
Gene position: 35188-36585 (Clockwise)
Preceding gene: 183219461
Following gene: 183219463
Centisome position: 0.98
GC content: 34.62
Gene sequence:
>1398_bases ATGAAACGTTTTTGGATATTATTATTCATTTTAACTTTTCCCATATTAGCACAAGAAAGTAAGGAATACAAACTTTCGGA TAAGGCATATGGTCTCGCATGGGATGGAGTCAATTTCTGGTACATTGATACAAATCGACGCGCCATTATCAAAATTAACG AAATTGGCGAACAAGAGATTTTTAATCTTGGATTGGCGAATCTAAGGGGAATTAGTTTTGATTCACGTGAAGGAAAAATT TTAGTCGTTGCTCCCAAACAAATTCTGAAGTTAGATCCAAACTCTGGCGGGATTACCGATAAAATTTCGATTCCATTAGC AAATGTGGCAGGGATCGCGAGTGTCGGAAATTATTATTATATTTTAGATTTGGATTCAGGAAAAGTGCAGATATATGATC AATCCACCTCACTTCTGATTGGTGGATTTTTTACAGACCGTACAAGACCTAGAGATATTTGTTATGGACGGGATTCCCTT TGGATTTCCGATTCAGCCGATAACAGTATCTATCGTTATGATACAAAAACAGGTAAAATCACAGGATCGATCAAAACAAA TTTGCGATCGGTCAGAGGTGTGTTACTCAGTGGATCCAAACTTTGGGTGGTAGACAGAGAAAATAAAGAAATCAAAAACA TACCCTTCATTGAAACCGAAAGGTTCATCGCATCGGGTGAAGAAGAATTTAACTTAGAAGTAACTCTTAAGTTTAAATTG GATTCTGTTTCTTTGTCCAAAGCTCAAATCGCCATTTTACACCCACCGTCAAACGAACAACAAAGGATTCGCGGAGTTAA ATTTACAGACCAATCATACGCACCTACATTCATCCAACGGAATCGAGTGCACTTAAAAAAATTATCAATCGAAGATTTAC CTGGTGAACAAGTTGTGAAGTATAAATTTTCTTCAAAAAATCAGTTCATCAAATACTATGTAACTGATGATTATTTGGAT AAAGAGGCAACCTATCCTGGTGATGTGATTCCGTTTTATGAAAAACCTCAAGAAGATATCAAATTATCTACTAGAGATTA TCTTGAATTGATTTACCAAGCACGACAAACAAGTATTAGTATCAATGATTTTAAAGAAAAGATGAAACAAAATGGAGTTC CTGTTCAATCCTTTCGTATGATTCGATTTGAAAAAGGAAAACCAAAATCCATTCAAGATTCATTATCAGTTTTTTTATTA GGATATGGTTGGATTCCGATCGGAGATTTAGGTTTAGGGAGTAATACTGACAAACGATATTTTGAAAAGAAAGAAACCGA TTTGATTTTGTATCAAAGTTTGAATCTGAAAAATTCGATTTCACCTGTCTACTTTCGAAAAGATGCCAATTCAGAATGGG AGAACTTACCTGCAGAAATTACTTATAAAATTAAGTAA
Upstream 100 bases:
>100_bases TTTTTGTTCCCAAACCGATCATACTCGGCTCTGAATTTGATAATCCTACTTTACTTGATGATCTATTTCGTCTGATAGTA AAGGTAGTAGGTATCAGCGA
Downstream 100 bases:
>100_bases CGTTCTTTTCAGTTTACTTTTTTCTTGTTCGTTACTCCAGACTCCATTCCCTTTTTTTTCAAAAGGGAATGATCAAACGA AGGAAAAAAAATTTAAGGAA
Product: putative signal peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 465; Mature: 465
Protein sequence:
>465_residues MKRFWILLFILTFPILAQESKEYKLSDKAYGLAWDGVNFWYIDTNRRAIIKINEIGEQEIFNLGLANLRGISFDSREGKI LVVAPKQILKLDPNSGGITDKISIPLANVAGIASVGNYYYILDLDSGKVQIYDQSTSLLIGGFFTDRTRPRDICYGRDSL WISDSADNSIYRYDTKTGKITGSIKTNLRSVRGVLLSGSKLWVVDRENKEIKNIPFIETERFIASGEEEFNLEVTLKFKL DSVSLSKAQIAILHPPSNEQQRIRGVKFTDQSYAPTFIQRNRVHLKKLSIEDLPGEQVVKYKFSSKNQFIKYYVTDDYLD KEATYPGDVIPFYEKPQEDIKLSTRDYLELIYQARQTSISINDFKEKMKQNGVPVQSFRMIRFEKGKPKSIQDSLSVFLL GYGWIPIGDLGLGSNTDKRYFEKKETDLILYQSLNLKNSISPVYFRKDANSEWENLPAEITYKIK
Sequences:
>Translated_465_residues MKRFWILLFILTFPILAQESKEYKLSDKAYGLAWDGVNFWYIDTNRRAIIKINEIGEQEIFNLGLANLRGISFDSREGKI LVVAPKQILKLDPNSGGITDKISIPLANVAGIASVGNYYYILDLDSGKVQIYDQSTSLLIGGFFTDRTRPRDICYGRDSL WISDSADNSIYRYDTKTGKITGSIKTNLRSVRGVLLSGSKLWVVDRENKEIKNIPFIETERFIASGEEEFNLEVTLKFKL DSVSLSKAQIAILHPPSNEQQRIRGVKFTDQSYAPTFIQRNRVHLKKLSIEDLPGEQVVKYKFSSKNQFIKYYVTDDYLD KEATYPGDVIPFYEKPQEDIKLSTRDYLELIYQARQTSISINDFKEKMKQNGVPVQSFRMIRFEKGKPKSIQDSLSVFLL GYGWIPIGDLGLGSNTDKRYFEKKETDLILYQSLNLKNSISPVYFRKDANSEWENLPAEITYKIK >Mature_465_residues MKRFWILLFILTFPILAQESKEYKLSDKAYGLAWDGVNFWYIDTNRRAIIKINEIGEQEIFNLGLANLRGISFDSREGKI LVVAPKQILKLDPNSGGITDKISIPLANVAGIASVGNYYYILDLDSGKVQIYDQSTSLLIGGFFTDRTRPRDICYGRDSL WISDSADNSIYRYDTKTGKITGSIKTNLRSVRGVLLSGSKLWVVDRENKEIKNIPFIETERFIASGEEEFNLEVTLKFKL DSVSLSKAQIAILHPPSNEQQRIRGVKFTDQSYAPTFIQRNRVHLKKLSIEDLPGEQVVKYKFSSKNQFIKYYVTDDYLD KEATYPGDVIPFYEKPQEDIKLSTRDYLELIYQARQTSISINDFKEKMKQNGVPVQSFRMIRFEKGKPKSIQDSLSVFLL GYGWIPIGDLGLGSNTDKRYFEKKETDLILYQSLNLKNSISPVYFRKDANSEWENLPAEITYKIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53448; Mature: 53448
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFWILLFILTFPILAQESKEYKLSDKAYGLAWDGVNFWYIDTNRRAIIKINEIGEQEI CCHHEEEHHHHHHHHHCCCCCCEEECCCCEEEEECCEEEEEEECCCEEEEEEECCCCHHH FNLGLANLRGISFDSREGKILVVAPKQILKLDPNSGGITDKISIPLANVAGIASVGNYYY HHCCHHHCCCCCCCCCCCEEEEECCHHHEEECCCCCCCEEEEECCHHHHHHHEECCCEEE ILDLDSGKVQIYDQSTSLLIGGFFTDRTRPRDICYGRDSLWISDSADNSIYRYDTKTGKI EEEECCCEEEEEECCCCEEEEEEECCCCCCCCEEECCCCEEEECCCCCCEEEEECCCCEE TGSIKTNLRSVRGVLLSGSKLWVVDRENKEIKNIPFIETERFIASGEEEFNLEVTLKFKL EEHHHHHHHHHCEEEECCCEEEEEECCCCCCCCCCCEECCHHHHCCCCEEEEEEEEEEEE DSVSLSKAQIAILHPPSNEQQRIRGVKFTDQSYAPTFIQRNRVHLKKLSIEDLPGEQVVK CCEEECCEEEEEECCCCCHHHHHCCEEECCCCCCCHHHHCCCEEEEEECCCCCCCCEEEE YKFSSKNQFIKYYVTDDYLDKEATYPGDVIPFYEKPQEDIKLSTRDYLELIYQARQTSIS EEECCCCCEEEEEEECCCCCCCCCCCCCEECCCCCCHHHEEECHHHHHHHHHHHHHCEEE INDFKEKMKQNGVPVQSFRMIRFEKGKPKSIQDSLSVFLLGYGWIPIGDLGLGSNTDKRY HHHHHHHHHHCCCCHHHEEEEEECCCCCCCHHHCEEEEEEEECCEEEECCCCCCCCCHHH FEKKETDLILYQSLNLKNSISPVYFRKDANSEWENLPAEITYKIK HHCCCCCEEEEEECCCCCCCCCEEEECCCCCHHHCCCEEEEEEEC >Mature Secondary Structure MKRFWILLFILTFPILAQESKEYKLSDKAYGLAWDGVNFWYIDTNRRAIIKINEIGEQEI CCHHEEEHHHHHHHHHCCCCCCEEECCCCEEEEECCEEEEEEECCCEEEEEEECCCCHHH FNLGLANLRGISFDSREGKILVVAPKQILKLDPNSGGITDKISIPLANVAGIASVGNYYY HHCCHHHCCCCCCCCCCCEEEEECCHHHEEECCCCCCCEEEEECCHHHHHHHEECCCEEE ILDLDSGKVQIYDQSTSLLIGGFFTDRTRPRDICYGRDSLWISDSADNSIYRYDTKTGKI EEEECCCEEEEEECCCCEEEEEEECCCCCCCCEEECCCCEEEECCCCCCEEEEECCCCEE TGSIKTNLRSVRGVLLSGSKLWVVDRENKEIKNIPFIETERFIASGEEEFNLEVTLKFKL EEHHHHHHHHHCEEEECCCEEEEEECCCCCCCCCCCEECCHHHHCCCCEEEEEEEEEEEE DSVSLSKAQIAILHPPSNEQQRIRGVKFTDQSYAPTFIQRNRVHLKKLSIEDLPGEQVVK CCEEECCEEEEEECCCCCHHHHHCCEEECCCCCCCHHHHCCCEEEEEECCCCCCCCEEEE YKFSSKNQFIKYYVTDDYLDKEATYPGDVIPFYEKPQEDIKLSTRDYLELIYQARQTSIS EEECCCCCEEEEEEECCCCCCCCCCCCCEECCCCCCHHHEEECHHHHHHHHHHHHHCEEE INDFKEKMKQNGVPVQSFRMIRFEKGKPKSIQDSLSVFLLGYGWIPIGDLGLGSNTDKRY HHHHHHHHHHCCCCHHHEEEEEECCCCCCCHHHCEEEEEEEECCEEEECCCCCCCCCHHH FEKKETDLILYQSLNLKNSISPVYFRKDANSEWENLPAEITYKIK HHCCCCCEEEEEECCCCCCCCCEEEECCCCCHHHCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA