Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
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Accession | NC_010581 |
Length | 4,170,153 |
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The map label for this gene is leuA [H]
Identifier: 182677591
GI number: 182677591
Start: 665986
End: 667584
Strand: Direct
Name: leuA [H]
Synonym: Bind_0596
Alternate gene names: 182677591
Gene position: 665986-667584 (Clockwise)
Preceding gene: 182677588
Following gene: 182677592
Centisome position: 15.97
GC content: 57.79
Gene sequence:
>1599_bases ATGACCACGAATAAGTCTTCCGAACCGGCAATGGGGTCCGCCATCCAGGAAACCGCCAATACGGAACAAATCATCATCTT CGACACGACTCTTCGCGATGGCGAACAATCGCCCGGTGCCTCGATGAATCTCGACGAGAAGATCGAAGTAGCCGAACTCT TGGACGCGATGGGCGTCGATGTGATCGAGGCGGGTTTTCCCGTCACGTCGGAGGGGGATTTCGAGGCCGTTTCGGCCATC TCCCGCCGCGTCAAGCGGGCGAGTGTCGCCGGTCTTGCCCGCGCTGCAGCGCGCGATATCGATCGTTGCGCCGAGGCCCT GCGTGATGCCGTACGGCCCCGCATGCATGTCTTCATCTCGACCTCTCCGCTGCATATGAAATATAAATTGCAGAAGGAGC CGGGCGAAGTCCTTGACATGATTTCGACCTATGTCGGACGGGCGCGCAATCGTATCGATGATATCGAATGGTCGGCTGAG GACGGCACCCGCACGGAGATCGATTTTCTGTGCCGCTGCGTGGAAGCGGCGATCAAGGCCGGCGCACGCACGATCAATAT TCCTGACACGGTCGGTTATACGATTCCGGAAGAATATCAGGCTTTGTTCGAAACAGTGCGGACGCGCGTTCCTAATTCCG ACCAGGCGATCTTCTCGGTCCATTGTCACAACGATCTCGGCCTTGCCGTGGCCAATACTTTGGCCGGTATCAAGGGTGGC GCGCGGCAGGTGGAATGCACGATCAATGGTCTTGGCGAGCGAGCTGGCAATGCCGCCATGGAAGAGGTCGTCATGGCCTT GCGGGTGCGGGCAGACGCCTTGGCCTATCACAGCAATATCGATGCACGCATGTTGACGCGAGCCTCGAAGCTCGTTTCGG CAGTCAGCTCCTTCCCGGTGCAATATAACAAGGCGATCGTTGGTCGGAACGCCTTCGCTCACGAGAGCGGTATTCATCAG GATGGCATGCTGAAAAATGCGCAGACCTATGAAATCATGACGCCGGAAAGTGTCGGCGTGCATAAAACCTCACTGGTCAT GGGCAAGCATTCGGGCCGCCACGCCTTCAAGGAAAAATTGAAGGAACTTGGTTATGAGCTCGGTGAAAACGCGCTCGAGG AAGCTTTCGCTCGATTCAAGGATCTCGCTGACCGCAAGAAGATCGTCTACGATGAAGATTTGATCGCTTTGGTGGATGAT GAAATTATTCACGCGCATGATCGAATCAAGCTTGTGGCCCTCACCGTGATCGCCGGAACCAAGGGTCCGCAATCGGCGGC CTTAACGCTGACGATCGACGGGGTGGAGCAAACCCATCAGGCGACGGGGAATGGCCCAATCGACGCTATTTTCAATGCCG TGCAGGCCTTGGTGCCGCATGGGGCCGTGCTGGAACTTTATCAGGTCCATGCCGTCACCAAGGGCACAGATGCGCAGGCG GAAGTCTCAGTGCGCTTGAGCGAGGATGGCAAGACCGTGACGGCCCGTGGCGCCGATCCGGATACGCTGGTCGCCTCGGC CAAGGCCTATATTGCCGCCTTGAATAAACTGGTCGTGCGGCGACACAAGAGCCGCCCCGACGACAGCCTCGCCGGTTGA
Upstream 100 bases:
>100_bases TTGCTGCTTCTTAGTTGCCCCTGAGAGCCGGCCGGGCCTTGCCTGGGCACTCAGGGGATCGATCGAAGTTTCAGCATCTC TCCTCACCCAGGACAAAATC
Downstream 100 bases:
>100_bases GATTGTGCGATAAGGTCTTGAAACCTTCAAGAAGGGCTAGACAGGTGAGCCCGCGTTTGCTAAATGCGCGTTCACCTGTT TCGGACACCCACGGTGTTTA
Product: 2-isopropylmalate synthase
Products: NA
Alternate protein names: Alpha-IPM synthase; Alpha-isopropylmalate synthase [H]
Number of amino acids: Translated: 532; Mature: 531
Protein sequence:
>532_residues MTTNKSSEPAMGSAIQETANTEQIIIFDTTLRDGEQSPGASMNLDEKIEVAELLDAMGVDVIEAGFPVTSEGDFEAVSAI SRRVKRASVAGLARAAARDIDRCAEALRDAVRPRMHVFISTSPLHMKYKLQKEPGEVLDMISTYVGRARNRIDDIEWSAE DGTRTEIDFLCRCVEAAIKAGARTINIPDTVGYTIPEEYQALFETVRTRVPNSDQAIFSVHCHNDLGLAVANTLAGIKGG ARQVECTINGLGERAGNAAMEEVVMALRVRADALAYHSNIDARMLTRASKLVSAVSSFPVQYNKAIVGRNAFAHESGIHQ DGMLKNAQTYEIMTPESVGVHKTSLVMGKHSGRHAFKEKLKELGYELGENALEEAFARFKDLADRKKIVYDEDLIALVDD EIIHAHDRIKLVALTVIAGTKGPQSAALTLTIDGVEQTHQATGNGPIDAIFNAVQALVPHGAVLELYQVHAVTKGTDAQA EVSVRLSEDGKTVTARGADPDTLVASAKAYIAALNKLVVRRHKSRPDDSLAG
Sequences:
>Translated_532_residues MTTNKSSEPAMGSAIQETANTEQIIIFDTTLRDGEQSPGASMNLDEKIEVAELLDAMGVDVIEAGFPVTSEGDFEAVSAI SRRVKRASVAGLARAAARDIDRCAEALRDAVRPRMHVFISTSPLHMKYKLQKEPGEVLDMISTYVGRARNRIDDIEWSAE DGTRTEIDFLCRCVEAAIKAGARTINIPDTVGYTIPEEYQALFETVRTRVPNSDQAIFSVHCHNDLGLAVANTLAGIKGG ARQVECTINGLGERAGNAAMEEVVMALRVRADALAYHSNIDARMLTRASKLVSAVSSFPVQYNKAIVGRNAFAHESGIHQ DGMLKNAQTYEIMTPESVGVHKTSLVMGKHSGRHAFKEKLKELGYELGENALEEAFARFKDLADRKKIVYDEDLIALVDD EIIHAHDRIKLVALTVIAGTKGPQSAALTLTIDGVEQTHQATGNGPIDAIFNAVQALVPHGAVLELYQVHAVTKGTDAQA EVSVRLSEDGKTVTARGADPDTLVASAKAYIAALNKLVVRRHKSRPDDSLAG >Mature_531_residues TTNKSSEPAMGSAIQETANTEQIIIFDTTLRDGEQSPGASMNLDEKIEVAELLDAMGVDVIEAGFPVTSEGDFEAVSAIS RRVKRASVAGLARAAARDIDRCAEALRDAVRPRMHVFISTSPLHMKYKLQKEPGEVLDMISTYVGRARNRIDDIEWSAED GTRTEIDFLCRCVEAAIKAGARTINIPDTVGYTIPEEYQALFETVRTRVPNSDQAIFSVHCHNDLGLAVANTLAGIKGGA RQVECTINGLGERAGNAAMEEVVMALRVRADALAYHSNIDARMLTRASKLVSAVSSFPVQYNKAIVGRNAFAHESGIHQD GMLKNAQTYEIMTPESVGVHKTSLVMGKHSGRHAFKEKLKELGYELGENALEEAFARFKDLADRKKIVYDEDLIALVDDE IIHAHDRIKLVALTVIAGTKGPQSAALTLTIDGVEQTHQATGNGPIDAIFNAVQALVPHGAVLELYQVHAVTKGTDAQAE VSVRLSEDGKTVTARGADPDTLVASAKAYIAALNKLVVRRHKSRPDDSLAG
Specific function: Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) [H]
COG id: COG0119
COG function: function code E; Isopropylmalate/homocitrate/citramalate synthases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786261, Length=502, Percent_Identity=46.4143426294821, Blast_Score=441, Evalue=1e-125, Organism=Saccharomyces cerevisiae, GI6320071, Length=391, Percent_Identity=27.8772378516624, Blast_Score=152, Evalue=9e-38, Organism=Saccharomyces cerevisiae, GI6320019, Length=374, Percent_Identity=28.3422459893048, Blast_Score=151, Evalue=3e-37, Organism=Saccharomyces cerevisiae, GI6324225, Length=536, Percent_Identity=26.1194029850746, Blast_Score=117, Evalue=4e-27, Organism=Saccharomyces cerevisiae, GI6324682, Length=537, Percent_Identity=24.7672253258845, Blast_Score=111, Evalue=3e-25,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013709 - InterPro: IPR002034 - InterPro: IPR013785 - InterPro: IPR005671 - InterPro: IPR000891 [H]
Pfam domain/function: PF00682 HMGL-like; PF08502 LeuA_dimer [H]
EC number: =2.3.3.13 [H]
Molecular weight: Translated: 57535; Mature: 57404
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: PS00815 AIPM_HOMOCIT_SYNTH_1 ; PS00816 AIPM_HOMOCIT_SYNTH_2 ; PS50991 PYR_CT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTNKSSEPAMGSAIQETANTEQIIIFDTTLRDGEQSPGASMNLDEKIEVAELLDAMGVD CCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCH VIEAGFPVTSEGDFEAVSAISRRVKRASVAGLARAAARDIDRCAEALRDAVRPRMHVFIS HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE TSPLHMKYKLQKEPGEVLDMISTYVGRARNRIDDIEWSAEDGTRTEIDFLCRCVEAAIKA CCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC GARTINIPDTVGYTIPEEYQALFETVRTRVPNSDQAIFSVHCHNDLGLAVANTLAGIKGG CCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCC ARQVECTINGLGERAGNAAMEEVVMALRVRADALAYHSNIDARMLTRASKLVSAVSSFPV CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC QYNKAIVGRNAFAHESGIHQDGMLKNAQTYEIMTPESVGVHKTSLVMGKHSGRHAFKEKL HHCCEEECCCCHHHCCCCCCCCCCCCCCEEEEECCCCCCCCHHEEEECCCCCHHHHHHHH KELGYELGENALEEAFARFKDLADRKKIVYDEDLIALVDDEIIHAHDRIKLVALTVIAGT HHHHHHHCHHHHHHHHHHHHHHHHHCCEEECCCHHEEHHHHHHHHCCCEEEEEEEEEECC KGPQSAALTLTIDGVEQTHQATGNGPIDAIFNAVQALVPHGAVLELYQVHAVTKGTDAQA CCCCCEEEEEEECCHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCE EVSVRLSEDGKTVTARGADPDTLVASAKAYIAALNKLVVRRHKSRPDDSLAG EEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TTNKSSEPAMGSAIQETANTEQIIIFDTTLRDGEQSPGASMNLDEKIEVAELLDAMGVD CCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCH VIEAGFPVTSEGDFEAVSAISRRVKRASVAGLARAAARDIDRCAEALRDAVRPRMHVFIS HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE TSPLHMKYKLQKEPGEVLDMISTYVGRARNRIDDIEWSAEDGTRTEIDFLCRCVEAAIKA CCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC GARTINIPDTVGYTIPEEYQALFETVRTRVPNSDQAIFSVHCHNDLGLAVANTLAGIKGG CCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCC ARQVECTINGLGERAGNAAMEEVVMALRVRADALAYHSNIDARMLTRASKLVSAVSSFPV CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC QYNKAIVGRNAFAHESGIHQDGMLKNAQTYEIMTPESVGVHKTSLVMGKHSGRHAFKEKL HHCCEEECCCCHHHCCCCCCCCCCCCCCEEEEECCCCCCCCHHEEEECCCCCHHHHHHHH KELGYELGENALEEAFARFKDLADRKKIVYDEDLIALVDDEIIHAHDRIKLVALTVIAGT HHHHHHHCHHHHHHHHHHHHHHHHHCCEEECCCHHEEHHHHHHHHCCCEEEEEEEEEECC KGPQSAALTLTIDGVEQTHQATGNGPIDAIFNAVQALVPHGAVLELYQVHAVTKGTDAQA CCCCCEEEEEEECCHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCE EVSVRLSEDGKTVTARGADPDTLVASAKAYIAALNKLVVRRHKSRPDDSLAG EEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA