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The map label for this gene is vhuG [H]

Identifier: 182677502

GI number: 182677502

Start: 561579

End: 562400

Strand: Direct

Name: vhuG [H]

Synonym: Bind_0506

Alternate gene names: 182677502

Gene position: 561579-562400 (Clockwise)

Preceding gene: 182677501

Following gene: 182677503

Centisome position: 13.47

GC content: 60.22

Gene sequence:

>822_bases
ATGAGTGAGCGGCGGCATCCCCGGCTGGCGGTTTGGAAATTTGCTTCATGCGACGGCTGCCAGCTCTCGCTGCTCGATTG
CGAGGACGAGCTTCTGACTCTCGCCAGTGTGATCGAAATCGCCAATTTCCCTGAGGCCTCGAGAGCCGTCGCGCCGGGCC
CTTATGACCTCTCCCTGGTCGAGGGATCGATCACGACGGAGCATGATGCGGAGCGTATCCGCATGGTCCGGGCCCAATCG
AGGCATCTCGTCACAATTGGCGCCTGCGCGACCGCCGGTGGCATCCAGACCCTTAAAAATTTTGCCGATGTGAATGCGTT
CATCGCCGCGGTCTATGCCTCGCCGCAATATATTGCGACGCTTTCCACTTCGACCCCGATCTCTGCGCATGTTCCAGTCG
ATTACGAATTGCAAGGCTGCCCCGTCAATAAGGTGCAACTCATCGAAGTGATCTCGGCTTTCTTGGCCGGACGCAAACCA
TCGATCGCGGCCCATAGCGTTTGCGTCGAATGTAAGCAGCATGGCACCGTCTGCGTCATGGTTCAGGGGATGCCTTGTCT
CGGGCCGGTGACTCATGCGGGGTGCGGCGCTATCTGCCCTTCGTTCCGGCGCGGTTGCTATGGTTGCTATGGCCCGATGG
AAACGCCCAACACGACGGCGCTCGCACGAGAATGGCAGGCTCTCGGCGCGGCACCGCGCGATATAAGCCGAGCTTTCCGC
ACCTTCTACGCCGCCGCCGAGCCCTTTCGGAAAGAGAGCGTCGTCCATGCCGACATCACCCACGACGACATCACTAATGG
CGACCAGGACGATCCTGGTTGA

Upstream 100 bases:

>100_bases
TGTGGTCATTGCCAGTTCGGGCCGCTCTTTGTCTGCAAGGATGGGCCAGTCATGCGGTTCGATCGAATCGCCGATTTCTT
CTCCATCCGGGAGATCTGAG

Downstream 100 bases:

>100_bases
CTATCTGGCTCGCGTCGAGGGCGAAGGAGCGCTCGATATCGAGGTCCATGATGGCCGCGTCACCTCGGCGCGGCTCAGGA
TCTTTGAACCGCCGCGTTTC

Product: NADH ubiquinone oxidoreductase 20 kDa subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MSERRHPRLAVWKFASCDGCQLSLLDCEDELLTLASVIEIANFPEASRAVAPGPYDLSLVEGSITTEHDAERIRMVRAQS
RHLVTIGACATAGGIQTLKNFADVNAFIAAVYASPQYIATLSTSTPISAHVPVDYELQGCPVNKVQLIEVISAFLAGRKP
SIAAHSVCVECKQHGTVCVMVQGMPCLGPVTHAGCGAICPSFRRGCYGCYGPMETPNTTALAREWQALGAAPRDISRAFR
TFYAAAEPFRKESVVHADITHDDITNGDQDDPG

Sequences:

>Translated_273_residues
MSERRHPRLAVWKFASCDGCQLSLLDCEDELLTLASVIEIANFPEASRAVAPGPYDLSLVEGSITTEHDAERIRMVRAQS
RHLVTIGACATAGGIQTLKNFADVNAFIAAVYASPQYIATLSTSTPISAHVPVDYELQGCPVNKVQLIEVISAFLAGRKP
SIAAHSVCVECKQHGTVCVMVQGMPCLGPVTHAGCGAICPSFRRGCYGCYGPMETPNTTALAREWQALGAAPRDISRAFR
TFYAAAEPFRKESVVHADITHDDITNGDQDDPG
>Mature_272_residues
SERRHPRLAVWKFASCDGCQLSLLDCEDELLTLASVIEIANFPEASRAVAPGPYDLSLVEGSITTEHDAERIRMVRAQSR
HLVTIGACATAGGIQTLKNFADVNAFIAAVYASPQYIATLSTSTPISAHVPVDYELQGCPVNKVQLIEVISAFLAGRKPS
IAAHSVCVECKQHGTVCVMVQGMPCLGPVTHAGCGAICPSFRRGCYGCYGPMETPNTTALAREWQALGAAPRDISRAFRT
FYAAAEPFRKESVVHADITHDDITNGDQDDPG

Specific function: Unknown

COG id: COG1941

COG function: function code C; Coenzyme F420-reducing hydrogenase, gamma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the [NiFe]/[NiFeSe] hydrogenase small subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006137 [H]

Pfam domain/function: PF01058 Oxidored_q6 [H]

EC number: NA

Molecular weight: Translated: 29309; Mature: 29177

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERRHPRLAVWKFASCDGCQLSLLDCEDELLTLASVIEIANFPEASRAVAPGPYDLSLV
CCCCCCCCEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHCCCCHHCCCCCCCCEEEEE
EGSITTEHDAERIRMVRAQSRHLVTIGACATAGGIQTLKNFADVNAFIAAVYASPQYIAT
ECCCCCCHHHHHHHHHHHCCCCEEEEECHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
LSTSTPISAHVPVDYELQGCPVNKVQLIEVISAFLAGRKPSIAAHSVCVECKQHGTVCVM
ECCCCCCEEECCCCEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEE
VQGMPCLGPVTHAGCGAICPSFRRGCYGCYGPMETPNTTALAREWQALGAAPRDISRAFR
ECCCCCCCCHHHCCHHHCCHHHHHCCEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHH
TFYAAAEPFRKESVVHADITHDDITNGDQDDPG
HHHHHHCCHHHCCEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
SERRHPRLAVWKFASCDGCQLSLLDCEDELLTLASVIEIANFPEASRAVAPGPYDLSLV
CCCCCCCEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHCCCCHHCCCCCCCCEEEEE
EGSITTEHDAERIRMVRAQSRHLVTIGACATAGGIQTLKNFADVNAFIAAVYASPQYIAT
ECCCCCCHHHHHHHHHHHCCCCEEEEECHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
LSTSTPISAHVPVDYELQGCPVNKVQLIEVISAFLAGRKPSIAAHSVCVECKQHGTVCVM
ECCCCCCEEECCCCEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEE
VQGMPCLGPVTHAGCGAICPSFRRGCYGCYGPMETPNTTALAREWQALGAAPRDISRAFR
ECCCCCCCCHHHCCHHHCCHHHHHCCEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHH
TFYAAAEPFRKESVVHADITHDDITNGDQDDPG
HHHHHHCCHHHCCEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]