Click here to switch to the map view.

The map label for this gene is 182677424

Identifier: 182677424

GI number: 182677424

Start: 482778

End: 483395

Strand: Direct

Name: 182677424

Synonym: Bind_0428

Alternate gene names: NA

Gene position: 482778-483395 (Clockwise)

Preceding gene: 182677421

Following gene: 182677427

Centisome position: 11.58

GC content: 56.8

Gene sequence:

>618_bases
GTGGATCAGTCGAACAATATGAGCGCGGACAAGCCACAGGCTCAACCCGTCACGATCAAGAAATATGCAAACCGGCGGCT
CTACAATACCGGGACGAGCGCTTACGTCACGCTTGAGGACCTGGCGTCGATGGTCAAAACCGGCGAAGATTTCGTCGTGT
TCGATGCCAAGAGCGGCGAGGATATCACCCGTTCGGTGCTGACGCAGATCATCTTCGAGCAGGAGAGCAAAGGCGGCCAG
AGTCTCTTGCCGATCACCTTTCTGCGTCAATTGATTCGGTTCTACGGCGACAGCATGCAGATGCTGGTGCCGAGTTATCT
CGAATTTACCATCGACAAGCTGACCCATGAGCAGGGCAAGTTTCGCGATCAGATGATGAGCGCCCCGCTGGCTGCCAATC
CAATCTTCAACTCTCTCGAAGAGCAGACCCGCAAGAATATGGCGATGTTCAATCAGGCGCTCGCCATGTTCTCCCCCTTC
GGGGGCACCGGCATGCCTCTGGTCCCCGAGACGAGTGAACCGCCGGCGCCAGCGCCGGAGAAGAACGACATCGACGACAT
GAAACGCCAATTGGACGAATTGCAGAAGAAGATCGAGGGGCTGAGCCGCAAGCCCTGA

Upstream 100 bases:

>100_bases
CGGTCGTCATCATTGCGCAACACGAATCGCGAGCAACGGCCCGCAACGTTCGAATAACGGTCCGGGCCGGTCTGGCGGGG
GGAATCGAAAGGGTAATTGC

Downstream 100 bases:

>100_bases
CGCCGCCGCGCAATTCGTGATGGCACCTGTTCGGCAATCAATCGGGCTGCCAACCCGCCGGCGCCATTTCGAAGGTTGAG
AACTGAAAGGCGGGTGCGAC

Product: polyhydroxyalkonate synthesis repressor PhaR

Products: NA

Alternate protein names: ORF4 [H]

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MDQSNNMSADKPQAQPVTIKKYANRRLYNTGTSAYVTLEDLASMVKTGEDFVVFDAKSGEDITRSVLTQIIFEQESKGGQ
SLLPITFLRQLIRFYGDSMQMLVPSYLEFTIDKLTHEQGKFRDQMMSAPLAANPIFNSLEEQTRKNMAMFNQALAMFSPF
GGTGMPLVPETSEPPAPAPEKNDIDDMKRQLDELQKKIEGLSRKP

Sequences:

>Translated_205_residues
MDQSNNMSADKPQAQPVTIKKYANRRLYNTGTSAYVTLEDLASMVKTGEDFVVFDAKSGEDITRSVLTQIIFEQESKGGQ
SLLPITFLRQLIRFYGDSMQMLVPSYLEFTIDKLTHEQGKFRDQMMSAPLAANPIFNSLEEQTRKNMAMFNQALAMFSPF
GGTGMPLVPETSEPPAPAPEKNDIDDMKRQLDELQKKIEGLSRKP
>Mature_205_residues
MDQSNNMSADKPQAQPVTIKKYANRRLYNTGTSAYVTLEDLASMVKTGEDFVVFDAKSGEDITRSVLTQIIFEQESKGGQ
SLLPITFLRQLIRFYGDSMQMLVPSYLEFTIDKLTHEQGKFRDQMMSAPLAANPIFNSLEEQTRKNMAMFNQALAMFSPF
GGTGMPLVPETSEPPAPAPEKNDIDDMKRQLDELQKKIEGLSRKP

Specific function: Unknown

COG id: COG5394

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012909
- InterPro:   IPR010134
- InterPro:   IPR007897 [H]

Pfam domain/function: PF05233 PHB_acc; PF07879 PHB_acc_N [H]

EC number: NA

Molecular weight: Translated: 23054; Mature: 23054

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQSNNMSADKPQAQPVTIKKYANRRLYNTGTSAYVTLEDLASMVKTGEDFVVFDAKSGE
CCCCCCCCCCCCCCCCCHHHHHHCCHHCCCCCCCEEEHHHHHHHHHCCCCEEEEECCCCC
DITRSVLTQIIFEQESKGGQSLLPITFLRQLIRFYGDSMQMLVPSYLEFTIDKLTHEQGK
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
FRDQMMSAPLAANPIFNSLEEQTRKNMAMFNQALAMFSPFGGTGMPLVPETSEPPAPAPE
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
KNDIDDMKRQLDELQKKIEGLSRKP
CCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDQSNNMSADKPQAQPVTIKKYANRRLYNTGTSAYVTLEDLASMVKTGEDFVVFDAKSGE
CCCCCCCCCCCCCCCCCHHHHHHCCHHCCCCCCCEEEHHHHHHHHHCCCCEEEEECCCCC
DITRSVLTQIIFEQESKGGQSLLPITFLRQLIRFYGDSMQMLVPSYLEFTIDKLTHEQGK
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
FRDQMMSAPLAANPIFNSLEEQTRKNMAMFNQALAMFSPFGGTGMPLVPETSEPPAPAPE
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
KNDIDDMKRQLDELQKKIEGLSRKP
CCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1396692 [H]