Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
---|---|
Accession | NC_010581 |
Length | 4,170,153 |
Click here to switch to the map view.
The map label for this gene is 182677395
Identifier: 182677395
GI number: 182677395
Start: 459142
End: 459666
Strand: Direct
Name: 182677395
Synonym: Bind_0399
Alternate gene names: NA
Gene position: 459142-459666 (Clockwise)
Preceding gene: 182677394
Following gene: 182677396
Centisome position: 11.01
GC content: 56.57
Gene sequence:
>525_bases ATGAGCATGGCGACCGGCTATGGCGAGCAGGCGCCAGTTCAAGACGTCGAAGCCCTGCTAGGAGCGGGCTTACCGAAAGA GGCGGCGCAGCATCTCGATCTTGCTGCGAGCCTGTATCACAAGGATGATGTCGCGCTTGATCATTTGCGGCAGGCCGAGC GGATCGCGCCGGCACATCCTGCTGTCTTGATCGGCCTTTATCGTTTTTATTTCTACAAAGGCCGCTTGGCTGAATGCCTC GAAGTGGCGCTTGTCTGCCTTTCCGAGGCCGCGCATCATAATAATCTTCCCGACGATTGGCGGCAGGTTCAGCGCGGCGA CGCGGAATTCAGTTCCTATGACATGATGCCGCGTTTCTTTCTCTTCGTTCTGAAGGGGTATGCCTATCTTCAGATGAGGC TTGGGAATCTCGACGAGGGTCTGGCGGCCGTCATGAAATTGCTGGATCTCGACCCGAGCGACAAGATCGGCGCCACTTTA TTGCTCGAAGTCCATCAGCGGATGGGGCAGGATGATGACGACTGA
Upstream 100 bases:
>100_bases CCGGTCTGAAATTCCATGATCCCAAGGCTGTTTCCACCTGTGGCAGCCATTCGGCTCCGAGCCTCGATCTCCACGATCAC AAGCACTAGGAGTTGATGGA
Downstream 100 bases:
>100_bases GGCGGATGAGGCCCGCGACTGGCAGGGTCGCGAACTCACATGTGAAGGCTGTCCGCATCAAGCCTTGCAGGCCGAAGGGA AATGCCAGCTCAAGCAGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: ORF5 [H]
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MSMATGYGEQAPVQDVEALLGAGLPKEAAQHLDLAASLYHKDDVALDHLRQAERIAPAHPAVLIGLYRFYFYKGRLAECL EVALVCLSEAAHHNNLPDDWRQVQRGDAEFSSYDMMPRFFLFVLKGYAYLQMRLGNLDEGLAAVMKLLDLDPSDKIGATL LLEVHQRMGQDDDD
Sequences:
>Translated_174_residues MSMATGYGEQAPVQDVEALLGAGLPKEAAQHLDLAASLYHKDDVALDHLRQAERIAPAHPAVLIGLYRFYFYKGRLAECL EVALVCLSEAAHHNNLPDDWRQVQRGDAEFSSYDMMPRFFLFVLKGYAYLQMRLGNLDEGLAAVMKLLDLDPSDKIGATL LLEVHQRMGQDDDD >Mature_173_residues SMATGYGEQAPVQDVEALLGAGLPKEAAQHLDLAASLYHKDDVALDHLRQAERIAPAHPAVLIGLYRFYFYKGRLAECLE VALVCLSEAAHHNNLPDDWRQVQRGDAEFSSYDMMPRFFLFVLKGYAYLQMRLGNLDEGLAAVMKLLDLDPSDKIGATLL LEVHQRMGQDDDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011990 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19434; Mature: 19303
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMATGYGEQAPVQDVEALLGAGLPKEAAQHLDLAASLYHKDDVALDHLRQAERIAPAHP CCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH AVLIGLYRFYFYKGRLAECLEVALVCLSEAAHHNNLPDDWRQVQRGDAEFSSYDMMPRFF HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHH LFVLKGYAYLQMRLGNLDEGLAAVMKLLDLDPSDKIGATLLLEVHQRMGQDDDD HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SMATGYGEQAPVQDVEALLGAGLPKEAAQHLDLAASLYHKDDVALDHLRQAERIAPAHP CCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH AVLIGLYRFYFYKGRLAECLEVALVCLSEAAHHNNLPDDWRQVQRGDAEFSSYDMMPRFF HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHH LFVLKGYAYLQMRLGNLDEGLAAVMKLLDLDPSDKIGATLLLEVHQRMGQDDDD HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1885524 [H]