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The map label for this gene is yjiA [H]

Identifier: 182677356

GI number: 182677356

Start: 407714

End: 408877

Strand: Direct

Name: yjiA [H]

Synonym: Bind_0359

Alternate gene names: 182677356

Gene position: 407714-408877 (Clockwise)

Preceding gene: 182677355

Following gene: 182677359

Centisome position: 9.78

GC content: 59.02

Gene sequence:

>1164_bases
ATGTCCGAGAGCCAAAGACGGCCACCCCCGCCCATTCCCTTAAGCATTCTCACGGGTTTCCTCGGCAGCGGGAAAACCAC
TTTGCTCAATAAGCTCCTGCGTGACCCGGCTTTGGCGGATACGCTGGTCATCATCAATGAATTCGGTGAAATCGGCCTCG
ATCATCTGCTGGTTGAAAAGGTCGATGGCGATCTCCTCGTCATGAGTTCGGGCTGCCTATGCTGCTCGATCCGCGGCGAT
CTCGTCAGTACGCTGGAAGATCTGCTGCGCCGGCGCGATAATGATCGCATCCAGCCGTTTCAGCGAGTCATGATCGAGAC
GACTGGCCTCGCTGATCCAGCTCCCGTCCTGCATACGATCATGTATCATCCCTATCTGATGCTGCGCTTTCGGCTGGATG
GCGTGATCACGACCGTCGATGCCGTCAATGGCAATGCGACGCTCGACGCCCATGCTGAGGCAGTCAAACAAGTGGCTGTC
GCCGATCGCCTGGTTCTGACCAAGACTGATCTCGCCCGCGATCCCCAGGCTCTCGAGGCTTTGCGCCAGCGTCTCCACAC
GCTCAATCCGGCCGCGCTCTTTCTCGATGCCGTACGCGGCGAGGCTGAGGCCAGCCGGCTGCTCGACGCGGGTCTTTATA
ATGCGGCCAGCAAATCTCTCGATGTCCAGAACTGGCTGCGGGCCGATGCCTATCCCACACCCGAACATGCGCATGAACAT
CGACATGATCACCATCACGATCGTGCCCATGACCATGCGCATACACATGACGTGAACCGGCATGATGACGCGATCCGCGC
CTTCTGTTTACGCGACGAGCGTCCGCTCGATCCTGACGGCTGGAGCCTGTTTCTCGATCTTCTGCGGCAGGCGCATGGTC
CGAATCTTTTGCGCGTCAAAGGTATTGTCGCGCTCGCCGATGCGCCCGACCGGCCGCTTGTCATCCATGGCGTCCAGCAT
GTCTTTCACCCGCCGCATCGCCTCGATCGATGGCCAGATGCCGACCATTCGACGCGGATCGTGTTCATCCTGAAGGATAT
GCAACCGGATTTCGTCGCGGGGCTCTGGAAGGCTGTCGGTAATGTTCCCACTGTGGACAGGCCTGATTCATCGGTGTTGA
GTGATAATCCCCTGAGCCCCAAACCCGGTGGTCTTCTGGCCTGA

Upstream 100 bases:

>100_bases
ATGGTTCGGCCGGCTTTGCGCCTGATGCAAGGTGGTGTAATAAAATAACACCCCGACAGGGAACGCCGAACTTTCGGCGT
TCTTCACAAGAGCCAGATCC

Downstream 100 bases:

>100_bases
AGACGTGAGCGCCGGGAAGGGGACTGTTGGGGTTAGAGGCTCTATCGGACGAAACCCATAATATCCTTCACGGCCGCCAT
ATGAGGCTCCGCCAGGGCAC

Product: cobalamin synthesis protein P47K

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MSESQRRPPPPIPLSILTGFLGSGKTTLLNKLLRDPALADTLVIINEFGEIGLDHLLVEKVDGDLLVMSSGCLCCSIRGD
LVSTLEDLLRRRDNDRIQPFQRVMIETTGLADPAPVLHTIMYHPYLMLRFRLDGVITTVDAVNGNATLDAHAEAVKQVAV
ADRLVLTKTDLARDPQALEALRQRLHTLNPAALFLDAVRGEAEASRLLDAGLYNAASKSLDVQNWLRADAYPTPEHAHEH
RHDHHHDRAHDHAHTHDVNRHDDAIRAFCLRDERPLDPDGWSLFLDLLRQAHGPNLLRVKGIVALADAPDRPLVIHGVQH
VFHPPHRLDRWPDADHSTRIVFILKDMQPDFVAGLWKAVGNVPTVDRPDSSVLSDNPLSPKPGGLLA

Sequences:

>Translated_387_residues
MSESQRRPPPPIPLSILTGFLGSGKTTLLNKLLRDPALADTLVIINEFGEIGLDHLLVEKVDGDLLVMSSGCLCCSIRGD
LVSTLEDLLRRRDNDRIQPFQRVMIETTGLADPAPVLHTIMYHPYLMLRFRLDGVITTVDAVNGNATLDAHAEAVKQVAV
ADRLVLTKTDLARDPQALEALRQRLHTLNPAALFLDAVRGEAEASRLLDAGLYNAASKSLDVQNWLRADAYPTPEHAHEH
RHDHHHDRAHDHAHTHDVNRHDDAIRAFCLRDERPLDPDGWSLFLDLLRQAHGPNLLRVKGIVALADAPDRPLVIHGVQH
VFHPPHRLDRWPDADHSTRIVFILKDMQPDFVAGLWKAVGNVPTVDRPDSSVLSDNPLSPKPGGLLA
>Mature_386_residues
SESQRRPPPPIPLSILTGFLGSGKTTLLNKLLRDPALADTLVIINEFGEIGLDHLLVEKVDGDLLVMSSGCLCCSIRGDL
VSTLEDLLRRRDNDRIQPFQRVMIETTGLADPAPVLHTIMYHPYLMLRFRLDGVITTVDAVNGNATLDAHAEAVKQVAVA
DRLVLTKTDLARDPQALEALRQRLHTLNPAALFLDAVRGEAEASRLLDAGLYNAASKSLDVQNWLRADAYPTPEHAHEHR
HDHHHDRAHDHAHTHDVNRHDDAIRAFCLRDERPLDPDGWSLFLDLLRQAHGPNLLRVKGIVALADAPDRPLVIHGVQHV
FHPPHRLDRWPDADHSTRIVFILKDMQPDFVAGLWKAVGNVPTVDRPDSSVLSDNPLSPKPGGLLA

Specific function: Binds GTP. May function as GTP-dependent regulator [H]

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI33469141, Length=373, Percent_Identity=27.3458445040214, Blast_Score=122, Evalue=4e-28,
Organism=Homo sapiens, GI126722884, Length=365, Percent_Identity=27.6712328767123, Blast_Score=122, Evalue=5e-28,
Organism=Homo sapiens, GI148727351, Length=373, Percent_Identity=27.3458445040214, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI146231952, Length=373, Percent_Identity=27.8820375335121, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI223941779, Length=359, Percent_Identity=26.1838440111421, Blast_Score=117, Evalue=3e-26,
Organism=Homo sapiens, GI223941776, Length=354, Percent_Identity=26.8361581920904, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI119120938, Length=138, Percent_Identity=38.4057971014493, Blast_Score=92, Evalue=1e-18,
Organism=Escherichia coli, GI87082430, Length=336, Percent_Identity=32.4404761904762, Blast_Score=137, Evalue=8e-34,
Organism=Escherichia coli, GI1788499, Length=178, Percent_Identity=32.5842696629214, Blast_Score=72, Evalue=8e-14,
Organism=Saccharomyces cerevisiae, GI6324356, Length=232, Percent_Identity=30.6034482758621, Blast_Score=102, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 42956; Mature: 42824

Theoretical pI: Translated: 6.47; Mature: 6.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESQRRPPPPIPLSILTGFLGSGKTTLLNKLLRDPALADTLVIINEFGEIGLDHLLVEK
CCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHH
VDGDLLVMSSGCLCCSIRGDLVSTLEDLLRRRDNDRIQPFQRVMIETTGLADPAPVLHTI
CCCCEEEEECCCEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHH
MYHPYLMLRFRLDGVITTVDAVNGNATLDAHAEAVKQVAVADRLVLTKTDLARDPQALEA
HHHHHHEEEEECCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHEEHHHHCCCHHHHHH
LRQRLHTLNPAALFLDAVRGEAEASRLLDAGLYNAASKSLDVQNWLRADAYPTPEHAHEH
HHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHH
RHDHHHDRAHDHAHTHDVNRHDDAIRAFCLRDERPLDPDGWSLFLDLLRQAHGPNLLRVK
CCCCCHHHHHCCCHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEE
GIVALADAPDRPLVIHGVQHVFHPPHRLDRWPDADHSTRIVFILKDMQPDFVAGLWKAVG
EEEEECCCCCCCEEEECHHHHCCCCHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHC
NVPTVDRPDSSVLSDNPLSPKPGGLLA
CCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SESQRRPPPPIPLSILTGFLGSGKTTLLNKLLRDPALADTLVIINEFGEIGLDHLLVEK
CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHH
VDGDLLVMSSGCLCCSIRGDLVSTLEDLLRRRDNDRIQPFQRVMIETTGLADPAPVLHTI
CCCCEEEEECCCEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHH
MYHPYLMLRFRLDGVITTVDAVNGNATLDAHAEAVKQVAVADRLVLTKTDLARDPQALEA
HHHHHHEEEEECCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHEEHHHHCCCHHHHHH
LRQRLHTLNPAALFLDAVRGEAEASRLLDAGLYNAASKSLDVQNWLRADAYPTPEHAHEH
HHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHH
RHDHHHDRAHDHAHTHDVNRHDDAIRAFCLRDERPLDPDGWSLFLDLLRQAHGPNLLRVK
CCCCCHHHHHCCCHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEE
GIVALADAPDRPLVIHGVQHVFHPPHRLDRWPDADHSTRIVFILKDMQPDFVAGLWKAVG
EEEEECCCCCCCEEEECHHHHCCCCHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHC
NVPTVDRPDSSVLSDNPLSPKPGGLLA
CCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 1650347 [H]