Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
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Accession | NC_010581 |
Length | 4,170,153 |
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The map label for this gene is 182677340
Identifier: 182677340
GI number: 182677340
Start: 386806
End: 387963
Strand: Direct
Name: 182677340
Synonym: Bind_0343
Alternate gene names: NA
Gene position: 386806-387963 (Clockwise)
Preceding gene: 182677331
Following gene: 182677346
Centisome position: 9.28
GC content: 58.98
Gene sequence:
>1158_bases ATGAGTCTTCCCGTTCGTGAGTTCCGGGTGCGGGGATATAGGTCGCTCAAATCCATCACCTATCCAATCTCCGGCCTCGA TATTTTTGTCGGTGCCAATGGCATCGGCAAGACCAATCTCTATCATGCTCTTGAGCTCATTCGTTCTGCCGCAGCGAATA CTTTGGCTCGTGATCTGGTCAAAGAAGGCGGTCTTCAATCCGCATTATGGGCGGGGCCTCGCCATCGGTCGGAGCCAGCA CGTATCCGCCTCGCCGTCGGTCTCTCTGATCCAGCGCGCCAGCGTTCTGGCGCAATTATCTATCGCTACGAGGTTGCGGT CGGATTTCCGCCGCCAACCTCGGCGGCCTTTCTAGCCGAGCCGCAGGTCAAGGAGGAAATTCTCACCTATCGGAGGGGAG CCAAGCCATTACGCTTGATTGATCGGAACGGCTCCTCCGTCATGGCGCGAGGTGAGGATGGCCGCCCGCTCCAGATCGAT ATAGACCTTCTTCCGTCAGAAACGGTGCTGGGGCGCTTGGAAGACCCTTCGCGGTACCCTGAGATGGACGCTTTGCGGCG GACGTTTCTGCAATGGCGGTTTTACCACGGCATCAGAACTGACGTGGCATCGCCGCTCCGCCAGCCATGCGCGGCTGTGG CAACGCCCTCGCTTGCATCAGATGGCTCTGATCTCGCCGCTGTCTTCGCAACCTTGGCTCATATTCGCCAGGATACCGCG GATCTCGACGCGGCTGTCGATCAAGCTTTCCCTGGTGCCAGATTAATTGTCCCTCATCCCGATCGGATGGCGCGTTTCGG CATGACGTTCCCCGAGTTCCCGCAACGGGTCTTTGAAGCCAACGAGCTTTCTGATGGAACTCTTCGGTTTCTCGCTCTCG CGGGCGCATTGCTCGCCTATCGATTACCGCCGTTCATCGCTCTGAACGAACCGGAGGCCAGCCTCCATCCCGATCTCATG CAACCTCTCGCCCGGCTTATCGTCCAAGCCGCGGAACGCACGCAAGTCTGGCTGGTTACCCATTCCACCCGCCTTGCTGA TGCCATTGCCGCCACTGGCGCGGGTAAGGTGCGCTCGGTGATGAGACAGGACGGAGCGACCCAGATCGAGGGGTTAAAAG GCTGGGGTACGTTCGAGGACGAGGATGAGGATGAGTAA
Upstream 100 bases:
>100_bases CAGAAAGTTCAAGTTTGGGCAGAAAATAGGAATTCGACAATCGTTTGCCGGTGGGGTTAAGGTGTGACTCTCCGCACTCT CTCCGCGAGCATCAGCGTTA
Downstream 100 bases:
>100_bases GCCAGCCACCGACTATAAAGTGGACACTGCGTAAGTCTGCTGCGAGTCGAGATGGGACGTTAAGCGATCATTTCGCAGAA AACGGCAGGGTGCAGGCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: SMC Domain-Containing Protein; ATPase-Like Protein; RecF Protein; SMC Domain Protein; ATPase RecF-Like Protein; RecF/RecN/SMC N Terminal Domain; Recf Like Family Protein; DNA Replication And Repair Protein RecF; RecF/RecN/SMC Domain-Containing Protein; ATPase RecF-Like
Number of amino acids: Translated: 385; Mature: 384
Protein sequence:
>385_residues MSLPVREFRVRGYRSLKSITYPISGLDIFVGANGIGKTNLYHALELIRSAAANTLARDLVKEGGLQSALWAGPRHRSEPA RIRLAVGLSDPARQRSGAIIYRYEVAVGFPPPTSAAFLAEPQVKEEILTYRRGAKPLRLIDRNGSSVMARGEDGRPLQID IDLLPSETVLGRLEDPSRYPEMDALRRTFLQWRFYHGIRTDVASPLRQPCAAVATPSLASDGSDLAAVFATLAHIRQDTA DLDAAVDQAFPGARLIVPHPDRMARFGMTFPEFPQRVFEANELSDGTLRFLALAGALLAYRLPPFIALNEPEASLHPDLM QPLARLIVQAAERTQVWLVTHSTRLADAIAATGAGKVRSVMRQDGATQIEGLKGWGTFEDEDEDE
Sequences:
>Translated_385_residues MSLPVREFRVRGYRSLKSITYPISGLDIFVGANGIGKTNLYHALELIRSAAANTLARDLVKEGGLQSALWAGPRHRSEPA RIRLAVGLSDPARQRSGAIIYRYEVAVGFPPPTSAAFLAEPQVKEEILTYRRGAKPLRLIDRNGSSVMARGEDGRPLQID IDLLPSETVLGRLEDPSRYPEMDALRRTFLQWRFYHGIRTDVASPLRQPCAAVATPSLASDGSDLAAVFATLAHIRQDTA DLDAAVDQAFPGARLIVPHPDRMARFGMTFPEFPQRVFEANELSDGTLRFLALAGALLAYRLPPFIALNEPEASLHPDLM QPLARLIVQAAERTQVWLVTHSTRLADAIAATGAGKVRSVMRQDGATQIEGLKGWGTFEDEDEDE >Mature_384_residues SLPVREFRVRGYRSLKSITYPISGLDIFVGANGIGKTNLYHALELIRSAAANTLARDLVKEGGLQSALWAGPRHRSEPAR IRLAVGLSDPARQRSGAIIYRYEVAVGFPPPTSAAFLAEPQVKEEILTYRRGAKPLRLIDRNGSSVMARGEDGRPLQIDI DLLPSETVLGRLEDPSRYPEMDALRRTFLQWRFYHGIRTDVASPLRQPCAAVATPSLASDGSDLAAVFATLAHIRQDTAD LDAAVDQAFPGARLIVPHPDRMARFGMTFPEFPQRVFEANELSDGTLRFLALAGALLAYRLPPFIALNEPEASLHPDLMQ PLARLIVQAAERTQVWLVTHSTRLADAIAATGAGKVRSVMRQDGATQIEGLKGWGTFEDEDEDE
Specific function: Unknown
COG id: COG4637
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42285; Mature: 42154
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPVREFRVRGYRSLKSITYPISGLDIFVGANGIGKTNLYHALELIRSAAANTLARDLV CCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH KEGGLQSALWAGPRHRSEPARIRLAVGLSDPARQRSGAIIYRYEVAVGFPPPTSAAFLAE HHCCCCHHHHCCCCCCCCCCEEEEEECCCCHHHHHCCEEEEEEEEEEECCCCCCCEEECC PQVKEEILTYRRGAKPLRLIDRNGSSVMARGEDGRPLQIDIDLLPSETVLGRLEDPSRYP CHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCEEEEEEEECCCHHHHCCCCCCCCCC EMDALRRTFLQWRFYHGIRTDVASPLRQPCAAVATPSLASDGSDLAAVFATLAHIRQDTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH DLDAAVDQAFPGARLIVPHPDRMARFGMTFPEFPQRVFEANELSDGTLRFLALAGALLAY HHHHHHHHCCCCCEEEECCCHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH RLPPFIALNEPEASLHPDLMQPLARLIVQAAERTQVWLVTHSTRLADAIAATGAGKVRSV HCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCHHHHHH MRQDGATQIEGLKGWGTFEDEDEDE HHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SLPVREFRVRGYRSLKSITYPISGLDIFVGANGIGKTNLYHALELIRSAAANTLARDLV CCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH KEGGLQSALWAGPRHRSEPARIRLAVGLSDPARQRSGAIIYRYEVAVGFPPPTSAAFLAE HHCCCCHHHHCCCCCCCCCCEEEEEECCCCHHHHHCCEEEEEEEEEEECCCCCCCEEECC PQVKEEILTYRRGAKPLRLIDRNGSSVMARGEDGRPLQIDIDLLPSETVLGRLEDPSRYP CHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCEEEEEEEECCCHHHHCCCCCCCCCC EMDALRRTFLQWRFYHGIRTDVASPLRQPCAAVATPSLASDGSDLAAVFATLAHIRQDTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH DLDAAVDQAFPGARLIVPHPDRMARFGMTFPEFPQRVFEANELSDGTLRFLALAGALLAY HHHHHHHHCCCCCEEEECCCHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH RLPPFIALNEPEASLHPDLMQPLARLIVQAAERTQVWLVTHSTRLADAIAATGAGKVRSV HCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCHHHHHH MRQDGATQIEGLKGWGTFEDEDEDE HHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA