Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
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Accession | NC_010581 |
Length | 4,170,153 |
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The map label for this gene is 182677331
Identifier: 182677331
GI number: 182677331
Start: 379626
End: 380591
Strand: Direct
Name: 182677331
Synonym: Bind_0334
Alternate gene names: NA
Gene position: 379626-380591 (Clockwise)
Preceding gene: 182677325
Following gene: 182677340
Centisome position: 9.1
GC content: 64.08
Gene sequence:
>966_bases ATGTCGTTACGCCAAAAATTCTTGAATATCCTGCTCGCCGGCCTTCTGGCTTTCGGTCTTGCCGGGGAGGCTTATGCGCG CGCGGGCGGCGGTGGCTCGTTCGGTAGCCGTGGCGGCCGGACGTTTTCCGCTCCCTCAATGACACAGACGGCGCCGCGCG GCGCCTCGCCCTTCGAGCGTTCGATGACCTCGCCCAACCAGGGTATTTTCCGCCCCGGCATGGGTGCGGGTATGGGCGCG CGGCCGGGCTTCTTCTCTGGGGGCTTCGGTCGTGGCTTGCTCGGCGGTTTCCTGGGCGCCGGACTGTTCGGACTTTTGTT CGGGCACGGACTGTTCGGTGGTCTCGGCTCCGGCATGTCCTTCCTCGGGCTGCTGGTCCAGATCGGCCTTTTGTTCCTCT TGTTCAAACTCGTCATGGGGTTTCTGCGCAACCGGCAGCAGCCCGCCTACCAGGGGGCGGACCAGGGCGGTCAGGCCCCG GGCAATCAGCCGCAGGGCGGCAATTTCGGCTTTGGCGGCGGCCCAGGGCCGGGACGAGCCGGCGTCAACGATCAGCCCTT GCCCATCGAGACGGCTGATTACACTGCCTTCGAACAGAAGCTCGCCGCCATCCAGTCCTCCTTCAGCAATGAGGACCTCA ATGGTCTGCGGCTCCTGACGACGCCGGAAATGGCCTCTTATTTTGCCGAGGAAATCGCTGGCAACGCGACCAAGGGGTTC GTCAACAAGATCAGCGACGTTAAACTCTTGCAGGGTGATGTCGCTGAAGCTTGGCGCGAAGCCAATGGCGAATATGCCAC GGTGGCGATGCGCTTCTCCCTCACCGACCGGATGATCGAGCGCGCGAGCGGCCGTATCGTTTCGGGGGGAACCCCGGAGC AGGTGACTGAAATCTGGACCTTCTTCCGGCCGCTCGGCGCAACGCCGGCCGATTGGAAGCTGGCGGCGATCCAGCAGCAG GGCTGA
Upstream 100 bases:
>100_bases GATCCCACGGGAGGCAATCTTTAAACCATTGGCATTTCCGTTTATCCTCCCCATATCTTCGGCGCGGATGGGCCAAAGGG CGCCTTCCTGGGATGAGACC
Downstream 100 bases:
>100_bases ACCGGCTCGACGGATTAGAATATAGGATCGTGAATCAATCGGCCCCGGGCAGGGAACTGTCCGGGGCCGATGTTTTTGAA GGCTTCTCGATCGCGTGGGC
Product: import inner membrane translocase subunit Tim44
Products: NA
Alternate protein names: Transmembrane Protein; Mitochondrial Import Inner Membrane Translocase Subunit Tim; Tim44-Like Domain Family; Lipoprotein
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MSLRQKFLNILLAGLLAFGLAGEAYARAGGGGSFGSRGGRTFSAPSMTQTAPRGASPFERSMTSPNQGIFRPGMGAGMGA RPGFFSGGFGRGLLGGFLGAGLFGLLFGHGLFGGLGSGMSFLGLLVQIGLLFLLFKLVMGFLRNRQQPAYQGADQGGQAP GNQPQGGNFGFGGGPGPGRAGVNDQPLPIETADYTAFEQKLAAIQSSFSNEDLNGLRLLTTPEMASYFAEEIAGNATKGF VNKISDVKLLQGDVAEAWREANGEYATVAMRFSLTDRMIERASGRIVSGGTPEQVTEIWTFFRPLGATPADWKLAAIQQQ G
Sequences:
>Translated_321_residues MSLRQKFLNILLAGLLAFGLAGEAYARAGGGGSFGSRGGRTFSAPSMTQTAPRGASPFERSMTSPNQGIFRPGMGAGMGA RPGFFSGGFGRGLLGGFLGAGLFGLLFGHGLFGGLGSGMSFLGLLVQIGLLFLLFKLVMGFLRNRQQPAYQGADQGGQAP GNQPQGGNFGFGGGPGPGRAGVNDQPLPIETADYTAFEQKLAAIQSSFSNEDLNGLRLLTTPEMASYFAEEIAGNATKGF VNKISDVKLLQGDVAEAWREANGEYATVAMRFSLTDRMIERASGRIVSGGTPEQVTEIWTFFRPLGATPADWKLAAIQQQ G >Mature_320_residues SLRQKFLNILLAGLLAFGLAGEAYARAGGGGSFGSRGGRTFSAPSMTQTAPRGASPFERSMTSPNQGIFRPGMGAGMGAR PGFFSGGFGRGLLGGFLGAGLFGLLFGHGLFGGLGSGMSFLGLLVQIGLLFLLFKLVMGFLRNRQQPAYQGADQGGQAPG NQPQGGNFGFGGGPGPGRAGVNDQPLPIETADYTAFEQKLAAIQSSFSNEDLNGLRLLTTPEMASYFAEEIAGNATKGFV NKISDVKLLQGDVAEAWREANGEYATVAMRFSLTDRMIERASGRIVSGGTPEQVTEIWTFFRPLGATPADWKLAAIQQQG
Specific function: Unknown
COG id: COG4395
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33597; Mature: 33465
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLRQKFLNILLAGLLAFGLAGEAYARAGGGGSFGSRGGRTFSAPSMTQTAPRGASPFER CCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHH SMTSPNQGIFRPGMGAGMGARPGFFSGGFGRGLLGGFLGAGLFGLLFGHGLFGGLGSGMS HCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLGLLVQIGLLFLLFKLVMGFLRNRQQPAYQGADQGGQAPGNQPQGGNFGFGGGPGPGRA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GVNDQPLPIETADYTAFEQKLAAIQSSFSNEDLNGLRLLTTPEMASYFAEEIAGNATKGF CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHCCCCHHHH VNKISDVKLLQGDVAEAWREANGEYATVAMRFSLTDRMIERASGRIVSGGTPEQVTEIWT HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHCCCEECCCCHHHHHHHHH FFRPLGATPADWKLAAIQQQG HHHHCCCCCCCCEEHHCCCCC >Mature Secondary Structure SLRQKFLNILLAGLLAFGLAGEAYARAGGGGSFGSRGGRTFSAPSMTQTAPRGASPFER CHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHH SMTSPNQGIFRPGMGAGMGARPGFFSGGFGRGLLGGFLGAGLFGLLFGHGLFGGLGSGMS HCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLGLLVQIGLLFLLFKLVMGFLRNRQQPAYQGADQGGQAPGNQPQGGNFGFGGGPGPGRA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GVNDQPLPIETADYTAFEQKLAAIQSSFSNEDLNGLRLLTTPEMASYFAEEIAGNATKGF CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHCCCCHHHH VNKISDVKLLQGDVAEAWREANGEYATVAMRFSLTDRMIERASGRIVSGGTPEQVTEIWT HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHCCCEECCCCHHHHHHHHH FFRPLGATPADWKLAAIQQQG HHHHCCCCCCCCEEHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA