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The map label for this gene is rrf2 [H]

Identifier: 182677317

GI number: 182677317

Start: 364293

End: 364835

Strand: Direct

Name: rrf2 [H]

Synonym: Bind_0320

Alternate gene names: 182677317

Gene position: 364293-364835 (Clockwise)

Preceding gene: 182677316

Following gene: 182677318

Centisome position: 8.74

GC content: 60.77

Gene sequence:

>543_bases
ATGGCACATCTGACAATCAGCGTAGAATATGGCATCCATTGCTTGCTGTGGCTCGTCGGCTCCGGCGATACTGCGATGAG
CATTCGAGAGCTGGCCGAGCTCCAGGGTATTTCGCCCAGCTTCCTTGCGAAGATTTTTCCCAAACTTGAAAAGGCCGGTA
TCGTCGCCGCGAGCGAGGGAGTGCGCGGGGGCTACCGCCTCGGCCGCTCCCCCGAAGAGATCAGCTTTCTCGACATTGTC
GACGCCATCGAAGGGCATAAGCCGCTGTTCGACTGTCAGGAGGTGCGCGAGCGTTGTGCGCTTTTTGCGGGAAAGCCGCC
GGAATGGGCGATGAAAGGCGTTTGCGCCATCCATGGCGTCATGCTGCAGGCGGAAAAGGCGATGCGTGACAGTCTCGCAA
GCCAGACCCTCGCGGATGTGGCGGCCACATTCGGTCGCAAGGCGCCCGATGCTTTCTTGAAAGACGTTCGTGCCTGGGTG
GACGATCACGCTGCTGATCGCACTGGCAGGCGCGACAAGCCGGCCAAGGATGCGCCGAGCTAG

Upstream 100 bases:

>100_bases
GCGAAGGCGTGAACCGGCCAAGGGAGGGCGATATTAAACTGAGACAAATTCACTCCTAGTTCGCCTTGACGGCTGAACTA
GGAGTGATATAGTCTGCGTT

Downstream 100 bases:

>100_bases
AGCCGGCGCGCCGGCCATACGGGTTTCCTCTCTTTCCTGAACATCTTTCTCGGCTTCTGTCGGACGCTTCCGGGAAAGTC
TCCACGCGCCTTCTCCGTGG

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MAHLTISVEYGIHCLLWLVGSGDTAMSIRELAELQGISPSFLAKIFPKLEKAGIVAASEGVRGGYRLGRSPEEISFLDIV
DAIEGHKPLFDCQEVRERCALFAGKPPEWAMKGVCAIHGVMLQAEKAMRDSLASQTLADVAATFGRKAPDAFLKDVRAWV
DDHAADRTGRRDKPAKDAPS

Sequences:

>Translated_180_residues
MAHLTISVEYGIHCLLWLVGSGDTAMSIRELAELQGISPSFLAKIFPKLEKAGIVAASEGVRGGYRLGRSPEEISFLDIV
DAIEGHKPLFDCQEVRERCALFAGKPPEWAMKGVCAIHGVMLQAEKAMRDSLASQTLADVAATFGRKAPDAFLKDVRAWV
DDHAADRTGRRDKPAKDAPS
>Mature_179_residues
AHLTISVEYGIHCLLWLVGSGDTAMSIRELAELQGISPSFLAKIFPKLEKAGIVAASEGVRGGYRLGRSPEEISFLDIVD
AIEGHKPLFDCQEVRERCALFAGKPPEWAMKGVCAIHGVMLQAEKAMRDSLASQTLADVAATFGRKAPDAFLKDVRAWVD
DHAADRTGRRDKPAKDAPS

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 19533; Mature: 19401

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHLTISVEYGIHCLLWLVGSGDTAMSIRELAELQGISPSFLAKIFPKLEKAGIVAASEG
CCEEEEEHHHHHEEEHHEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEECCCC
VRGGYRLGRSPEEISFLDIVDAIEGHKPLFDCQEVRERCALFAGKPPEWAMKGVCAIHGV
CCCCHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
MLQAEKAMRDSLASQTLADVAATFGRKAPDAFLKDVRAWVDDHAADRTGRRDKPAKDAPS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
AHLTISVEYGIHCLLWLVGSGDTAMSIRELAELQGISPSFLAKIFPKLEKAGIVAASEG
CEEEEEHHHHHEEEHHEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEECCCC
VRGGYRLGRSPEEISFLDIVDAIEGHKPLFDCQEVRERCALFAGKPPEWAMKGVCAIHGV
CCCCHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
MLQAEKAMRDSLASQTLADVAATFGRKAPDAFLKDVRAWVDDHAADRTGRRDKPAKDAPS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8335628 [H]