Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
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Accession | NC_010581 |
Length | 4,170,153 |
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The map label for this gene is cysK [H]
Identifier: 182677212
GI number: 182677212
Start: 250848
End: 251837
Strand: Direct
Name: cysK [H]
Synonym: Bind_0213
Alternate gene names: 182677212
Gene position: 250848-251837 (Clockwise)
Preceding gene: 182677211
Following gene: 182677213
Centisome position: 6.02
GC content: 61.01
Gene sequence:
>990_bases ATGGCACAGCCAGCCGTGAAACAACCTGATGCGCCTGTTCAGACCGCGGGACGCGGCCGCATTTATGATTCCATCACCGA GACGATCGGCAATACGCCTCTCGTGCGGCTGCAGAAGATTGCCAAGGAAAAGGGCGTTAAGGCCAATCTGCTCGCCAAGC TCGAATTCTTCAATCCGATCGCCAGCGTGAAGGACCGGATTGGCGTCCATATGATCGCGAGCCTGGAGGCCGCCGGTAAG ATCGTCCCCGGCAAGACCACTTTGATCGAGCCGACCTCTGGCAATACTGGCATTGCGCTGGCTTTCGTCGCTGCCGCGCG CGGCTACAAGCTGATTCTGGTCATGCCGGAATCCATGTCGCTCGAGCGGCGCAAGATGCTTGCCCTGCTCGGAGCCGAGC TCGTTCTGACGCCCGCTCCCCAAGGGATGAAGGGCGCGATCGCCAAGGCCGAGGAACTGGTGCAGGCGACACCCGACGCC GTGATTCCGCGCCAATTCGACAATCCCGCCAATCCTGAAATCCATCGCCTGACCACGGCCGAGGAAATCTGGAACGATAC GGAAGGCAATGTGGATTATTTCGTCTCCGGTGTCGGCACCGGCGGCACGATCACCGGCGTCGCTCAGGTTCTGAAGCCCC GCCGCCCGAGCCTGAAAATCGTCGCTGTCGAACCTGAGGATTCGCCCGTCCTGTCCGGCGGTCAGCCAGGTCCGCATAAG ATCCAGGGTATCGGTGCTGGCTTCGTGCCGTCCGTTCTCGACCGGCCCCTGATCGATGAAGTCGTCACCGTCGGCAATCA GACGGCCTTTGAGACGGCTCGCCTCGTGGCGCGCCTCGAAGGCATTCCAGTCGGTATTTCCTCTGGCGCCGCAGTCGCCG CCGCCATCGAGGTCGGCCTGCGCCCTGAAGCCGAAGGCAAGAATATCGTCCTGATCATTCCGTCTTTTGCTGAGCGCTAT TTGTCGACGGCTTTGTTCGAAGGTCTTTGA
Upstream 100 bases:
>100_bases GTTCGGTTTAGCCGATCGATTTCTTTCGGCTCGGCAAGAAGCAGTTTTGCGAGAAGCTTCCTCTCTTGCCCGGCCGCGAC ACTCTCCCTGGAGCAGTAAA
Downstream 100 bases:
>100_bases TCTTCTCTCTATTTTACGGGCTTCACGGCAAGGCCGGCGGTGATCACCGCCGGCCTTTGTCATTCAATCTCCGCAAGCAA CCTTTCGCGACCTTTCGTTT
Product: cysteine synthase
Products: NA
Alternate protein names: OAS sulfhydrylase; OASS; Cysteine synthase A; CSase A; O-acetylserine (thiol)-lyase A; OAS-TL A; O-acetylserine-specific cysteine synthase; Sulfide-dependent cysteine synthase [H]
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MAQPAVKQPDAPVQTAGRGRIYDSITETIGNTPLVRLQKIAKEKGVKANLLAKLEFFNPIASVKDRIGVHMIASLEAAGK IVPGKTTLIEPTSGNTGIALAFVAAARGYKLILVMPESMSLERRKMLALLGAELVLTPAPQGMKGAIAKAEELVQATPDA VIPRQFDNPANPEIHRLTTAEEIWNDTEGNVDYFVSGVGTGGTITGVAQVLKPRRPSLKIVAVEPEDSPVLSGGQPGPHK IQGIGAGFVPSVLDRPLIDEVVTVGNQTAFETARLVARLEGIPVGISSGAAVAAAIEVGLRPEAEGKNIVLIIPSFAERY LSTALFEGL
Sequences:
>Translated_329_residues MAQPAVKQPDAPVQTAGRGRIYDSITETIGNTPLVRLQKIAKEKGVKANLLAKLEFFNPIASVKDRIGVHMIASLEAAGK IVPGKTTLIEPTSGNTGIALAFVAAARGYKLILVMPESMSLERRKMLALLGAELVLTPAPQGMKGAIAKAEELVQATPDA VIPRQFDNPANPEIHRLTTAEEIWNDTEGNVDYFVSGVGTGGTITGVAQVLKPRRPSLKIVAVEPEDSPVLSGGQPGPHK IQGIGAGFVPSVLDRPLIDEVVTVGNQTAFETARLVARLEGIPVGISSGAAVAAAIEVGLRPEAEGKNIVLIIPSFAERY LSTALFEGL >Mature_328_residues AQPAVKQPDAPVQTAGRGRIYDSITETIGNTPLVRLQKIAKEKGVKANLLAKLEFFNPIASVKDRIGVHMIASLEAAGKI VPGKTTLIEPTSGNTGIALAFVAAARGYKLILVMPESMSLERRKMLALLGAELVLTPAPQGMKGAIAKAEELVQATPDAV IPRQFDNPANPEIHRLTTAEEIWNDTEGNVDYFVSGVGTGGTITGVAQVLKPRRPSLKIVAVEPEDSPVLSGGQPGPHKI QGIGAGFVPSVLDRPLIDEVVTVGNQTAFETARLVARLEGIPVGISSGAAVAAAIEVGLRPEAEGKNIVLIIPSFAERYL STALFEGL
Specific function: Catalyzes the conversion of O-acetylserine (OAS) to cysteine through the elimination of acetate and addition of hydrogen sulfide [H]
COG id: COG0031
COG function: function code E; Cysteine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cysteine synthase/cystathionine beta- synthase family [H]
Homologues:
Organism=Homo sapiens, GI295821202, Length=336, Percent_Identity=41.0714285714286, Blast_Score=239, Evalue=2e-63, Organism=Homo sapiens, GI295821200, Length=336, Percent_Identity=41.0714285714286, Blast_Score=239, Evalue=2e-63, Organism=Homo sapiens, GI4557415, Length=336, Percent_Identity=41.0714285714286, Blast_Score=239, Evalue=2e-63, Organism=Escherichia coli, GI1788754, Length=319, Percent_Identity=55.7993730407524, Blast_Score=298, Evalue=3e-82, Organism=Escherichia coli, GI2367138, Length=304, Percent_Identity=42.4342105263158, Blast_Score=218, Evalue=4e-58, Organism=Caenorhabditis elegans, GI17535051, Length=303, Percent_Identity=52.4752475247525, Blast_Score=305, Evalue=2e-83, Organism=Caenorhabditis elegans, GI17562970, Length=300, Percent_Identity=52.6666666666667, Blast_Score=297, Evalue=4e-81, Organism=Caenorhabditis elegans, GI32566674, Length=295, Percent_Identity=53.2203389830509, Blast_Score=293, Evalue=1e-79, Organism=Caenorhabditis elegans, GI115535073, Length=311, Percent_Identity=51.7684887459807, Blast_Score=286, Evalue=9e-78, Organism=Caenorhabditis elegans, GI17561720, Length=309, Percent_Identity=51.1326860841424, Blast_Score=269, Evalue=1e-72, Organism=Caenorhabditis elegans, GI17534315, Length=320, Percent_Identity=42.1875, Blast_Score=204, Evalue=4e-53, Organism=Caenorhabditis elegans, GI32566672, Length=212, Percent_Identity=50.4716981132076, Blast_Score=203, Evalue=1e-52, Organism=Caenorhabditis elegans, GI25147552, Length=322, Percent_Identity=40.0621118012422, Blast_Score=183, Evalue=1e-46, Organism=Caenorhabditis elegans, GI17561716, Length=121, Percent_Identity=47.9338842975207, Blast_Score=105, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6321594, Length=314, Percent_Identity=40.4458598726115, Blast_Score=213, Evalue=4e-56, Organism=Saccharomyces cerevisiae, GI6321449, Length=329, Percent_Identity=34.9544072948328, Blast_Score=137, Evalue=2e-33, Organism=Drosophila melanogaster, GI24643623, Length=326, Percent_Identity=38.9570552147239, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI20129101, Length=326, Percent_Identity=38.9570552147239, Blast_Score=197, Evalue=1e-50,
Paralogues:
None
Copy number: 2820 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001216 - InterPro: IPR005856 - InterPro: IPR005859 - InterPro: IPR001926 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =2.5.1.47 [H]
Molecular weight: Translated: 34595; Mature: 34463
Theoretical pI: Translated: 6.82; Mature: 6.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQPAVKQPDAPVQTAGRGRIYDSITETIGNTPLVRLQKIAKEKGVKANLLAKLEFFNPI CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCHH ASVKDRIGVHMIASLEAAGKIVPGKTTLIEPTSGNTGIALAFVAAARGYKLILVMPESMS HHHHHHHCCHHEEEHHHCCCCCCCCCEEEECCCCCCCCHHHEEHHHCCCEEEEECCCCCC LERRKMLALLGAELVLTPAPQGMKGAIAKAEELVQATPDAVIPRQFDNPANPEIHRLTTA HHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECH EEIWNDTEGNVDYFVSGVGTGGTITGVAQVLKPRRPSLKIVAVEPEDSPVLSGGQPGPHK HHHHCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCE IQGIGAGFVPSVLDRPLIDEVVTVGNQTAFETARLVARLEGIPVGISSGAAVAAAIEVGL EEECCCCCCHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCEECCCCCCEEEHHHHCC RPEAEGKNIVLIIPSFAERYLSTALFEGL CCCCCCCEEEEEECHHHHHHHHHHHHHCC >Mature Secondary Structure AQPAVKQPDAPVQTAGRGRIYDSITETIGNTPLVRLQKIAKEKGVKANLLAKLEFFNPI CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCHH ASVKDRIGVHMIASLEAAGKIVPGKTTLIEPTSGNTGIALAFVAAARGYKLILVMPESMS HHHHHHHCCHHEEEHHHCCCCCCCCCEEEECCCCCCCCHHHEEHHHCCCEEEEECCCCCC LERRKMLALLGAELVLTPAPQGMKGAIAKAEELVQATPDAVIPRQFDNPANPEIHRLTTA HHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECH EEIWNDTEGNVDYFVSGVGTGGTITGVAQVLKPRRPSLKIVAVEPEDSPVLSGGQPGPHK HHHHCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCE IQGIGAGFVPSVLDRPLIDEVVTVGNQTAFETARLVARLEGIPVGISSGAAVAAAIEVGL EEECCCCCCHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCEECCCCCCEEEHHHHCC RPEAEGKNIVLIIPSFAERYLSTALFEGL CCCCCCCEEEEEECHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]