Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
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Accession | NC_010581 |
Length | 4,170,153 |
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The map label for this gene is proP [H]
Identifier: 182677176
GI number: 182677176
Start: 209216
End: 210619
Strand: Direct
Name: proP [H]
Synonym: Bind_0176
Alternate gene names: 182677176
Gene position: 209216-210619 (Clockwise)
Preceding gene: 182677175
Following gene: 182677178
Centisome position: 5.02
GC content: 57.48
Gene sequence:
>1404_bases ATGACGACACAGAGGGCGGACTCCGATGTAGAGAACGGGGCCGGGCTGAAATTCCTGGTTTTTGCATCAAGCCTTGGCAC CATGATCGAATGGTATGATTTCTTTCTCTACGGCAGCCTGGCGGTTTTCTTTTCTGAACTCTTCTATCCCAAGGACAATC CGGTTGCGGCTTTGCTCATCAGCGTTGCCACTTTTGCGACGGGCTTTGCCGTGCGTCCTCTTGGTGCCGTATTGTTCGGC CATCTCGGCGACAGGATCGGTCGCAAGACGACTTTCCTGATCACCTTGCTCTTGATGGGTGGTGCCACGGCCCTGATCGG CATTTTGCCGACCTATGCCAGCGTCGGCCTTTTGGCGCCTGTCCTGCTCGTCGTGCTGCGTCTCATCCAAGGTCTGGCGC TCGGTGGCGAATATGGTGGCGCGGCAACTTATGTGGCCGAACATGCGCCAGATGGCAGACGGGGTGGCTGGACGAGCGCG ATCCAGACCATGGCCTCGATGGGGTTCTTCGTATCTCTCGCGGTGGTCCTGTCCTGCCGTTTTCTTTTGGGTGATGCCAT CTTTGCATCCTGGGGCTGGCGCATTCCCTTCCTGCTTTCGGCCGTGCTGGTGATGCTCTCTCTTGGGGCGCGTTTACGGC TTGCCGAATCGCCGATCTTTCTTCAGCTCAAGGCCGAGGATCGTGTGTCGAAATCACCCGTGCGCGAAAGTTTCGCCGAT CCGCGTAATCGCCGCCTGATGCTCGCCGTTCTGTTCGGAGTCGCGAGCGGTCAGGCCGTGACGTTCTATACGGCAAATTT TTACGCGCTTTATTTCCTCCAGAGTATTTTGAAGGTGGATTTCCTGACCTCGAATCTTGTGATGGTTCTGGGTGTCTTGA TCGGCATGCCTCTCTTTGTCCTGTTTGGCATCTGGTCCGATAAAATCGGCCGCAAGCCGCTCATCATCGCCGGTATGGCG GCGGCGGTCGTGCTGCTAGTGCCGATCTTCATGGTCATGCAGTCGGCGGTCGGTCCGCAGGGTATCAATATCTGGTTGCT GGCAGCCTGTGTTTTCGTTCTCGTCGCGATTGCGGCGGCGGTCTATGGACCTTACGCGGCCTATCTCGTCGAGGTCTTTC CGCCGCAGATTCGTTATACGTCCTTGTCGATCCCCTATCATATCGGCAATGGCATTTTCGGCGGCTTTCTGCCGCTGATT GGCTTGTCACTGGTCGCGGCCACAGGCAATCCGCTCGCCGGGCTCATCTATCCGATTGCGGTTTGCGTGATCAATGTCAT CATTGGCAGCCTCTATCTGCCGGAGACATTGCATACACCGATTGATGGCCGGACCTCCGTCGAGGATCTGGCGGATGAAA GCCTGCCTTTCGCGGCCGCGCTGCCGCCGAAATCCGCCGCCTAA
Upstream 100 bases:
>100_bases TTTGGACGATAAAGGCGCATACGTCGAAAGGGGAAATTTTTAGAAGAGGAACGATGCGTTAGGATAAACAGATAAAGACA AAATAGTGGGAGGAATTAGC
Downstream 100 bases:
>100_bases TCGCAGCCTGTAATCTCTTGTGCCAAAGGGCGGAGCCGGCAAGGTTCCCGCCCTTTCTCATTCCCTTTTCTCAACGAGAT TCCGACGCCGGTCGGAAAAC
Product: major facilitator transporter
Products: betaine [Cytoplasm]; Proton [Cytoplasm]; L-proline [Cytoplasm] [C]
Alternate protein names: Proline porter II; PPII [H]
Number of amino acids: Translated: 467; Mature: 466
Protein sequence:
>467_residues MTTQRADSDVENGAGLKFLVFASSLGTMIEWYDFFLYGSLAVFFSELFYPKDNPVAALLISVATFATGFAVRPLGAVLFG HLGDRIGRKTTFLITLLLMGGATALIGILPTYASVGLLAPVLLVVLRLIQGLALGGEYGGAATYVAEHAPDGRRGGWTSA IQTMASMGFFVSLAVVLSCRFLLGDAIFASWGWRIPFLLSAVLVMLSLGARLRLAESPIFLQLKAEDRVSKSPVRESFAD PRNRRLMLAVLFGVASGQAVTFYTANFYALYFLQSILKVDFLTSNLVMVLGVLIGMPLFVLFGIWSDKIGRKPLIIAGMA AAVVLLVPIFMVMQSAVGPQGINIWLLAACVFVLVAIAAAVYGPYAAYLVEVFPPQIRYTSLSIPYHIGNGIFGGFLPLI GLSLVAATGNPLAGLIYPIAVCVINVIIGSLYLPETLHTPIDGRTSVEDLADESLPFAAALPPKSAA
Sequences:
>Translated_467_residues MTTQRADSDVENGAGLKFLVFASSLGTMIEWYDFFLYGSLAVFFSELFYPKDNPVAALLISVATFATGFAVRPLGAVLFG HLGDRIGRKTTFLITLLLMGGATALIGILPTYASVGLLAPVLLVVLRLIQGLALGGEYGGAATYVAEHAPDGRRGGWTSA IQTMASMGFFVSLAVVLSCRFLLGDAIFASWGWRIPFLLSAVLVMLSLGARLRLAESPIFLQLKAEDRVSKSPVRESFAD PRNRRLMLAVLFGVASGQAVTFYTANFYALYFLQSILKVDFLTSNLVMVLGVLIGMPLFVLFGIWSDKIGRKPLIIAGMA AAVVLLVPIFMVMQSAVGPQGINIWLLAACVFVLVAIAAAVYGPYAAYLVEVFPPQIRYTSLSIPYHIGNGIFGGFLPLI GLSLVAATGNPLAGLIYPIAVCVINVIIGSLYLPETLHTPIDGRTSVEDLADESLPFAAALPPKSAA >Mature_466_residues TTQRADSDVENGAGLKFLVFASSLGTMIEWYDFFLYGSLAVFFSELFYPKDNPVAALLISVATFATGFAVRPLGAVLFGH LGDRIGRKTTFLITLLLMGGATALIGILPTYASVGLLAPVLLVVLRLIQGLALGGEYGGAATYVAEHAPDGRRGGWTSAI QTMASMGFFVSLAVVLSCRFLLGDAIFASWGWRIPFLLSAVLVMLSLGARLRLAESPIFLQLKAEDRVSKSPVRESFADP RNRRLMLAVLFGVASGQAVTFYTANFYALYFLQSILKVDFLTSNLVMVLGVLIGMPLFVLFGIWSDKIGRKPLIIAGMAA AVVLLVPIFMVMQSAVGPQGINIWLLAACVFVLVAIAAAVYGPYAAYLVEVFPPQIRYTSLSIPYHIGNGIFGGFLPLIG LSLVAATGNPLAGLIYPIAVCVINVIIGSLYLPETLHTPIDGRTSVEDLADESLPFAAALPPKSAA
Specific function: Proton symporter that senses osmotic shifts and responds by importing osmolytes such as proline, glycine betaine, stachydrine, pipecolic acid, ectoine and taurine. It is both an osmosensor and an osmoregulator which is available to participate early in th
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1790550, Length=449, Percent_Identity=32.739420935412, Blast_Score=221, Evalue=7e-59, Organism=Escherichia coli, GI1788292, Length=410, Percent_Identity=33.6585365853659, Blast_Score=209, Evalue=2e-55, Organism=Escherichia coli, GI1788942, Length=405, Percent_Identity=32.5925925925926, Blast_Score=190, Evalue=2e-49, Organism=Escherichia coli, GI1789941, Length=374, Percent_Identity=36.8983957219251, Blast_Score=182, Evalue=3e-47, Organism=Escherichia coli, GI87082404, Length=332, Percent_Identity=25.6024096385542, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI87082231, Length=216, Percent_Identity=27.3148148148148, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1786229, Length=347, Percent_Identity=25.9365994236311, Blast_Score=65, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR015041 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF08946 Osmo_CC; PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 49831; Mature: 49699
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: PS00024 HEMOPEXIN ; PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQRADSDVENGAGLKFLVFASSLGTMIEWYDFFLYGSLAVFFSELFYPKDNPVAALLI CCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH SVATFATGFAVRPLGAVLFGHLGDRIGRKTTFLITLLLMGGATALIGILPTYASVGLLAP HHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH VLLVVLRLIQGLALGGEYGGAATYVAEHAPDGRRGGWTSAIQTMASMGFFVSLAVVLSCR HHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FLLGDAIFASWGWRIPFLLSAVLVMLSLGARLRLAESPIFLQLKAEDRVSKSPVRESFAD HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCCCCCCHHHHHHCC PRNRRLMLAVLFGVASGQAVTFYTANFYALYFLQSILKVDFLTSNLVMVLGVLIGMPLFV CCCCEEHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFGIWSDKIGRKPLIIAGMAAAVVLLVPIFMVMQSAVGPQGINIWLLAACVFVLVAIAAA HHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH VYGPYAAYLVEVFPPQIRYTSLSIPYHIGNGIFGGFLPLIGLSLVAATGNPLAGLIYPIA HHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH VCVINVIIGSLYLPETLHTPIDGRTSVEDLADESLPFAAALPPKSAA HHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHCCCCCEECCCCCCCC >Mature Secondary Structure TTQRADSDVENGAGLKFLVFASSLGTMIEWYDFFLYGSLAVFFSELFYPKDNPVAALLI CCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH SVATFATGFAVRPLGAVLFGHLGDRIGRKTTFLITLLLMGGATALIGILPTYASVGLLAP HHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH VLLVVLRLIQGLALGGEYGGAATYVAEHAPDGRRGGWTSAIQTMASMGFFVSLAVVLSCR HHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FLLGDAIFASWGWRIPFLLSAVLVMLSLGARLRLAESPIFLQLKAEDRVSKSPVRESFAD HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCCCCCCHHHHHHCC PRNRRLMLAVLFGVASGQAVTFYTANFYALYFLQSILKVDFLTSNLVMVLGVLIGMPLFV CCCCEEHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFGIWSDKIGRKPLIIAGMAAAVVLLVPIFMVMQSAVGPQGINIWLLAACVFVLVAIAAA HHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH VYGPYAAYLVEVFPPQIRYTSLSIPYHIGNGIFGGFLPLIGLSLVAATGNPLAGLIYPIA HHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH VCVINVIIGSLYLPETLHTPIDGRTSVEDLADESLPFAAALPPKSAA HHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHCCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: betaine [Periplasm]; Proton [Periplasm]; L-proline [Periplasm] [C]
Specific reaction: Proton [Periplasm] + betaine [Periplasm] = Proton [Cytoplasm] + betaine [Cytoplasm] Proton [Periplasm] + L-proline [Periplasm] = Proton [Cytoplasm] + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]