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The map label for this gene is omp31 [H]

Identifier: 182677110

GI number: 182677110

Start: 123668

End: 124402

Strand: Direct

Name: omp31 [H]

Synonym: Bind_0108

Alternate gene names: 182677110

Gene position: 123668-124402 (Clockwise)

Preceding gene: 182677106

Following gene: 182677113

Centisome position: 2.97

GC content: 53.61

Gene sequence:

>735_bases
ATGTTGAGGACAATCATTCATTCCAGTATCGTAATCATGGCGAGTTCAGTTGCCGCGCTTGCGGCGGATCTTCCGAATCG
TGCCGCGCCGCCCACCGTGCCCTATCTTCCGCCATCGCCGGCCTTTTCTTGGACTGGCGTTTATCTCGGGGGACAGATTG
GTTATCAATTTGGACGGGATTCTATCACGGCTCCGGGTCTTTTTTCAGTAGGACATTCACCGAACGGGGTCGTCGGTGGC
GCGCATATCGGCTTTAATTATCAAGTCAGCCAATTCATCGTGGGCTTTGAAGGTGACGTGAACGGATCGAGCTATTCTGG
ATCTGTCTTCAACCCCGTCTTCCGAACACAATTGACATCCCGTATCCCAGTCGATGGTTCCCTTCGCGGCCGCATCGGGG
CCGCTTGGGATCGTGTCCTCGTCTACGCAACCGGCGGGGCGGCTTTCGCATCGATTAAACATGGATATATCGGTTCTTCG
CTCGTTCCCGGTTCCGCGACCCTTACAAATGATCGAGTCGGTTGGACAGTCGGAGGCGGCGTCGAATATGCCATGACTGA
CAATTGGTCAGTACGTGTCGATTATCGCTATACGGATTATGGGAACATCTCCGATTTTCCTGGCACTATCACGGTTCCAC
GCATACATCACGAAACGAATAATCGCGTGCAGGCCGGTTTCAGCTATAAGTTCGATACGTCTCCGCCCACCGTCCCGATC
GTCGCTAAATACTGA

Upstream 100 bases:

>100_bases
CTTCGCAAGTTTATTGCCACCCATAAAGGAAATCCCGCACACGCCTCCAACATTGGGGCAATCAATTATTCAAAAACTTT
GGCCCATTTCGAGAAAGAAT

Downstream 100 bases:

>100_bases
TCACTCCAGCAAATATCTGATATTCAGTATCAAGATCATAAAAATACTCTGTGATCATTCTCGCTCTGGTGATTTGGCTA
TTCTCGCATCGGGAATCACG

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MLRTIIHSSIVIMASSVAALAADLPNRAAPPTVPYLPPSPAFSWTGVYLGGQIGYQFGRDSITAPGLFSVGHSPNGVVGG
AHIGFNYQVSQFIVGFEGDVNGSSYSGSVFNPVFRTQLTSRIPVDGSLRGRIGAAWDRVLVYATGGAAFASIKHGYIGSS
LVPGSATLTNDRVGWTVGGGVEYAMTDNWSVRVDYRYTDYGNISDFPGTITVPRIHHETNNRVQAGFSYKFDTSPPTVPI
VAKY

Sequences:

>Translated_244_residues
MLRTIIHSSIVIMASSVAALAADLPNRAAPPTVPYLPPSPAFSWTGVYLGGQIGYQFGRDSITAPGLFSVGHSPNGVVGG
AHIGFNYQVSQFIVGFEGDVNGSSYSGSVFNPVFRTQLTSRIPVDGSLRGRIGAAWDRVLVYATGGAAFASIKHGYIGSS
LVPGSATLTNDRVGWTVGGGVEYAMTDNWSVRVDYRYTDYGNISDFPGTITVPRIHHETNNRVQAGFSYKFDTSPPTVPI
VAKY
>Mature_244_residues
MLRTIIHSSIVIMASSVAALAADLPNRAAPPTVPYLPPSPAFSWTGVYLGGQIGYQFGRDSITAPGLFSVGHSPNGVVGG
AHIGFNYQVSQFIVGFEGDVNGSSYSGSVFNPVFRTQLTSRIPVDGSLRGRIGAAWDRVLVYATGGAAFASIKHGYIGSS
LVPGSATLTNDRVGWTVGGGVEYAMTDNWSVRVDYRYTDYGNISDFPGTITVPRIHHETNNRVQAGFSYKFDTSPPTVPI
VAKY

Specific function: Major outer membrane protein associated with peptidoglycans. May function as a porin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the omp25/ropB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017690
- InterPro:   IPR011250
- InterPro:   IPR000498 [H]

Pfam domain/function: PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 25971; Mature: 25971

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRTIIHSSIVIMASSVAALAADLPNRAAPPTVPYLPPSPAFSWTGVYLGGQIGYQFGRD
CCHHHHHHHHEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCEECEEECCC
SITAPGLFSVGHSPNGVVGGAHIGFNYQVSQFIVGFEGDVNGSSYSGSVFNPVFRTQLTS
CCCCCCEEECCCCCCCEEECEEEECCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHH
RIPVDGSLRGRIGAAWDRVLVYATGGAAFASIKHGYIGSSLVPGSATLTNDRVGWTVGGG
CCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCCCEEECCCCCEEECCC
VEYAMTDNWSVRVDYRYTDYGNISDFPGTITVPRIHHETNNRVQAGFSYKFDTSPPTVPI
EEEEEECCEEEEEEEEECCCCCCCCCCCEEEEEEEEECCCCEEEECEEEEECCCCCCEEE
VAKY
EECC
>Mature Secondary Structure
MLRTIIHSSIVIMASSVAALAADLPNRAAPPTVPYLPPSPAFSWTGVYLGGQIGYQFGRD
CCHHHHHHHHEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCEECEEECCC
SITAPGLFSVGHSPNGVVGGAHIGFNYQVSQFIVGFEGDVNGSSYSGSVFNPVFRTQLTS
CCCCCCEEECCCCCCCEEECEEEECCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHH
RIPVDGSLRGRIGAAWDRVLVYATGGAAFASIKHGYIGSSLVPGSATLTNDRVGWTVGGG
CCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCCCEEECCCCCEEECCC
VEYAMTDNWSVRVDYRYTDYGNISDFPGTITVPRIHHETNNRVQAGFSYKFDTSPPTVPI
EEEEEECCEEEEEEEEECCCCCCCCCCCEEEEEEEEECCCCEEEECEEEEECCCCCCEEE
VAKY
EECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8751924; 11756688 [H]