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The map label for this gene is 182677050

Identifier: 182677050

GI number: 182677050

Start: 48563

End: 50029

Strand: Direct

Name: 182677050

Synonym: Bind_0048

Alternate gene names: NA

Gene position: 48563-50029 (Clockwise)

Preceding gene: 182677046

Following gene: 182677051

Centisome position: 1.16

GC content: 61.01

Gene sequence:

>1467_bases
ATGAGCCAGACTCTTGCCCATTCAGCCGGTCAAGCCGATGCGTCACGCAAGATTTTCGCGGGCCCTCGCCTGAAACGGCT
GCGCCGTGAGCGCCAGATCACCCAGGCCCGCATGGCCGAGGAGCTCAATGTTTCGCCGAGCTACCTGAACCTTATGGAGC
GCAATCAGCGCCCGATCACCGTCCAGGTCCTGATCCGTCTCACCGATGTCTATGGTGTTGACCCGCGCGATTTTCTCTCT
GTCGAGGCTGAACAATCCTTGGGGGAGATGGATCAGATTCTTGCCGATCCACTCTTTCGCGAGGTTCCGATCCCGCGCGC
CGAAATGCAGGACGCCGCCGAACATGCGCCCGCCATGCTGTCAGCCCTGGTGCGTCTGTATCGCGCCTATTCGGCGGCGC
GCGAGGCCGGCGAGGCGGGGGCCTTTACGGGCCTCGATCCCGACCGCGCCGAGCCCGTGCTGACGGATAATCCGATCGAC
CGCGTGCGGGCGATCCTGAACGAGGCGCGCAATCATTTTCCCGAAATCGAGGCAGCCGCCGAAACCTTTGCCGCCGATCT
CGCCTTGACCGGTCATGAATTGTTTTACGGTCTGTCGGAATATTTGCGCGCCCATCACAATATTAGGGTCAGGCCGCTGC
CGCTCGAAGTCATGGGCGATCGGTTGCGCTGGTATGATCATCATCGCCGTCAATTGATGATTTCCGAGGTGATGGATCAG
CCGGGCCGCACCTTTCAGGCGGCCTATCAACTCGGCCTTGTCAAATTCGGCGGCCTGCTCGACGAGATCGCCGGACGGCT
CGAAACCAGCGACGAGACGAGCCGGCGTCTGCTCCGTGTCACGCTCGCCAATTATTTCGCGGGCGCCTTGATGATGCCCT
ATGGCCGTTTTCATGACGCGGCTGAACTGCTTGGCTATGATATCGACGTTCTGGCGGCGCGTTTCGGCGCCAGCATCGAG
CAGGTCGCTCACCGCCTGACCACTTTGTCGCGGCCGACCCTGCGCGGCATTCCCTTTTTCATGGTGCGCGTCGATATGGC
TGGCAATGTCTCGAAGCGCTTTTCCTCGGGCCGTTTTCCCTTCGCCCATTCCGGTGGGACTTGCCCCTTGTGGAATGTGC
ACGCGGCCTTCAGCGATCCAGGCCGCATCCTGACGCAGATCATCGAACTGACCGACGGCTCGCAATGGTTTTCGATTGCC
CGGACCGTGCGCCGCTCCGTGACGCCCTGGGGCGCGATCGAGCCGCGTTTCGCCATCGGGCTCGGCTGTGAGATCAAATA
TGCGCGCCGTCTAATCTATGCCAAGGGTCATGATCTTGAAACGGTCGATGCGACTCCGGTTGGCGTCAATTGCCGCCTGT
GCGACCGTCAAGCGTGTCCGCAACGGTCGGCACCGCCAGCCTTGCGGCATCTGCGTGTCGATGAGAATATGCGCAATGTC
TCACCGATCACCTTCAACGAATTGTAA

Upstream 100 bases:

>100_bases
CAATAGACAAGTGGCTTGTAAAGGAATGAGGTTGTGGTGTAATTTTCGTACATTGTTAATTTGTCAGTGTGTAAAGAAAG
TTACTAACTAGCAGGTCCTT

Downstream 100 bases:

>100_bases
GGCCCGCTCGGACGTTTCGTGCCGTCCGGCGTTTTTCCAAAAAACCGGCTTTTCCTCGCGGGCTTTGAAGGATAGGCGTT
GAAGGCGACGGTGGAAGCGT

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 488; Mature: 487

Protein sequence:

>488_residues
MSQTLAHSAGQADASRKIFAGPRLKRLRRERQITQARMAEELNVSPSYLNLMERNQRPITVQVLIRLTDVYGVDPRDFLS
VEAEQSLGEMDQILADPLFREVPIPRAEMQDAAEHAPAMLSALVRLYRAYSAAREAGEAGAFTGLDPDRAEPVLTDNPID
RVRAILNEARNHFPEIEAAAETFAADLALTGHELFYGLSEYLRAHHNIRVRPLPLEVMGDRLRWYDHHRRQLMISEVMDQ
PGRTFQAAYQLGLVKFGGLLDEIAGRLETSDETSRRLLRVTLANYFAGALMMPYGRFHDAAELLGYDIDVLAARFGASIE
QVAHRLTTLSRPTLRGIPFFMVRVDMAGNVSKRFSSGRFPFAHSGGTCPLWNVHAAFSDPGRILTQIIELTDGSQWFSIA
RTVRRSVTPWGAIEPRFAIGLGCEIKYARRLIYAKGHDLETVDATPVGVNCRLCDRQACPQRSAPPALRHLRVDENMRNV
SPITFNEL

Sequences:

>Translated_488_residues
MSQTLAHSAGQADASRKIFAGPRLKRLRRERQITQARMAEELNVSPSYLNLMERNQRPITVQVLIRLTDVYGVDPRDFLS
VEAEQSLGEMDQILADPLFREVPIPRAEMQDAAEHAPAMLSALVRLYRAYSAAREAGEAGAFTGLDPDRAEPVLTDNPID
RVRAILNEARNHFPEIEAAAETFAADLALTGHELFYGLSEYLRAHHNIRVRPLPLEVMGDRLRWYDHHRRQLMISEVMDQ
PGRTFQAAYQLGLVKFGGLLDEIAGRLETSDETSRRLLRVTLANYFAGALMMPYGRFHDAAELLGYDIDVLAARFGASIE
QVAHRLTTLSRPTLRGIPFFMVRVDMAGNVSKRFSSGRFPFAHSGGTCPLWNVHAAFSDPGRILTQIIELTDGSQWFSIA
RTVRRSVTPWGAIEPRFAIGLGCEIKYARRLIYAKGHDLETVDATPVGVNCRLCDRQACPQRSAPPALRHLRVDENMRNV
SPITFNEL
>Mature_487_residues
SQTLAHSAGQADASRKIFAGPRLKRLRRERQITQARMAEELNVSPSYLNLMERNQRPITVQVLIRLTDVYGVDPRDFLSV
EAEQSLGEMDQILADPLFREVPIPRAEMQDAAEHAPAMLSALVRLYRAYSAAREAGEAGAFTGLDPDRAEPVLTDNPIDR
VRAILNEARNHFPEIEAAAETFAADLALTGHELFYGLSEYLRAHHNIRVRPLPLEVMGDRLRWYDHHRRQLMISEVMDQP
GRTFQAAYQLGLVKFGGLLDEIAGRLETSDETSRRLLRVTLANYFAGALMMPYGRFHDAAELLGYDIDVLAARFGASIEQ
VAHRLTTLSRPTLRGIPFFMVRVDMAGNVSKRFSSGRFPFAHSGGTCPLWNVHAAFSDPGRILTQIIELTDGSQWFSIAR
TVRRSVTPWGAIEPRFAIGLGCEIKYARRLIYAKGHDLETVDATPVGVNCRLCDRQACPQRSAPPALRHLRVDENMRNVS
PITFNEL

Specific function: Unknown

COG id: COG3800

COG function: function code R; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018653
- InterPro:   IPR010359
- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF09856 DUF2083; PF06114 DUF955; PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 54784; Mature: 54653

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQTLAHSAGQADASRKIFAGPRLKRLRRERQITQARMAEELNVSPSYLNLMERNQRPIT
CCCCHHCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEE
VQVLIRLTDVYGVDPRDFLSVEAEQSLGEMDQILADPLFREVPIPRAEMQDAAEHAPAML
EHHHHHHHHHCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
SALVRLYRAYSAAREAGEAGAFTGLDPDRAEPVLTDNPIDRVRAILNEARNHFPEIEAAA
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHH
ETFAADLALTGHELFYGLSEYLRAHHNIRVRPLPLEVMGDRLRWYDHHRRQLMISEVMDQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PGRTFQAAYQLGLVKFGGLLDEIAGRLETSDETSRRLLRVTLANYFAGALMMPYGRFHDA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
AELLGYDIDVLAARFGASIEQVAHRLTTLSRPTLRGIPFFMVRVDMAGNVSKRFSSGRFP
HHHHCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHCCCCCC
FAHSGGTCPLWNVHAAFSDPGRILTQIIELTDGSQWFSIARTVRRSVTPWGAIEPRFAIG
CCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEE
LGCEIKYARRLIYAKGHDLETVDATPVGVNCRLCDRQACPQRSAPPALRHLRVDENMRNV
CCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHEECCCCCCCC
SPITFNEL
CCCCCCCC
>Mature Secondary Structure 
SQTLAHSAGQADASRKIFAGPRLKRLRRERQITQARMAEELNVSPSYLNLMERNQRPIT
CCCHHCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEE
VQVLIRLTDVYGVDPRDFLSVEAEQSLGEMDQILADPLFREVPIPRAEMQDAAEHAPAML
EHHHHHHHHHCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
SALVRLYRAYSAAREAGEAGAFTGLDPDRAEPVLTDNPIDRVRAILNEARNHFPEIEAAA
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHH
ETFAADLALTGHELFYGLSEYLRAHHNIRVRPLPLEVMGDRLRWYDHHRRQLMISEVMDQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PGRTFQAAYQLGLVKFGGLLDEIAGRLETSDETSRRLLRVTLANYFAGALMMPYGRFHDA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
AELLGYDIDVLAARFGASIEQVAHRLTTLSRPTLRGIPFFMVRVDMAGNVSKRFSSGRFP
HHHHCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHCCCCCC
FAHSGGTCPLWNVHAAFSDPGRILTQIIELTDGSQWFSIARTVRRSVTPWGAIEPRFAIG
CCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEE
LGCEIKYARRLIYAKGHDLETVDATPVGVNCRLCDRQACPQRSAPPALRHLRVDENMRNV
CCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHEECCCCCCCC
SPITFNEL
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]