Click here to switch to the map view.

The map label for this gene is oxaA

Identifier: 182682731

GI number: 182682731

Start: 2533153

End: 2534850

Strand: Reverse

Name: oxaA

Synonym: XfasM23_2224

Alternate gene names: 182682731

Gene position: 2534850-2533153 (Counterclockwise)

Preceding gene: 182682732

Following gene: 182682730

Centisome position: 99.97

GC content: 43.05

Gene sequence:

>1698_bases
ATGAACCAGACTCGTGTATTACTGATATTTTCCTGGCTGACGGTAGCAACACTATTGTGGATGGATTGGAGTAAAAATAA
AAATGAAACACTAGAAATCTCGGCTTCTCATAATCTTGGTGTTGATAGCAATTTGGAGTTGGAGCACGCAGTTCCCCAAA
TTCATGCTGGCGCAGTTCCACTTCAAAAAGACTCACAATTAATTGCAGCTGCTCCGAAAGTGCCTGTGATCAATGTAACA
ACTGATGTCCTACAGCTAAAATTAGATGGATTTAGCATACTTGCTGCTGATTTATTACGTTTTCCTCAAAGTAAAGATCG
AGGTGCTAAGCCAATTAAGTTGCTTACAGATGATCCAAATTATCCTTACAGTGCCACTACTGGTTGGGTAAGCCAGAGTA
ATTCTCCAGTGCCGAATTTAAGTACATTTCTTCCTGAGCAGCCAGATGTTTCCTATAAATTGGCCAATGATCAAAATCGT
TTAGTGGTCCCGTTTATTTGGACAGCTGCAAATGGAGTCAGCATTCGCCGAACATTTACTTTCGAACGTGGTCGCTATGC
CATCTTAATTAGAGATGAAATCCGTAACAGTGGCGAGACCCCTTGGAACGCTTATGTTTTCCGTAAGTTGAGTCGGGTAC
CTATACCTAATATCTTAAACCGCGCGATGACCAATCCAGACTCGTTCAGTTTTAACGGCGCTGTTTGGTACAGTGAGAAA
GGTGGTTATGAACGCCGTGCGTTTAAGGATTATATGAATGATGGCGGTCTTAATCGAGAAATTGGTGGTGGTTGGATCGC
ACTGCTTCAACATCATTTTTTCACTGCATGGATCCCGCAGAAAGATCAAGCATCGTTGTATTTATTAGCTCAGAATGGTT
CACGTGATATAGCTGAACTCCGTGGGCCTGCTTTTACGGTAGCGCCTGGTCAAACTACAACGACGGAGGCCAGATTGTGG
GTCGGTCCGAAGCTGGTCGAGCAAATTACTAAAGAGCATGTCAAGGGATTAGATCGTGTTGTTGACTATAGTCGCTTCCA
GTTAATGGCATTGATTGGTCAAGGTTTATTTTGGATCTTGAGTCACCTGAACAGTCTTTTGCATAACTGGGGATGGGCTA
TTGTCGGTTTGGTAGTCTTGCTTCGTATTGCCATGTACCCTTTAAGTGCTTCCCAATATAAATCCGCAGCGAAAATGCGT
AAATTTCAACCGCGCCTGCAGCAGCTTAAGGAACGCTATGGTGAGGATAGGCAAAAGTTCCAGCAAGCGATGATGGAACT
ATATAAGAAAGAAAAAATTAATCCCATGGGTGGGTGCTTCCCTATTTTAATTCAGATGCCGATTTTCTTTGCGCTGTATT
GGGTGTTGGTTGAGTCTGTTGAGTTGCGTCAAGCACCTTGGCTGGGTTGGATCCAGGATCTGACTACGCGCGATCCTTAT
TTTATCTTGCCTCTTCTCAATATAGTAATCATGTGGGCAACACAAAAACTGACTCCGACACCAGCTGGTATGGATCCTAT
CGCTGGAAAAATGATGCAGGTGATGCCGTTGATTTTTGGCGTGATGATGGCTTTTGTGCCCTCCGGTTTAGCATTGTATT
GGGTGATCAATGGTGGTTTAAATTTGTTAATCCAATGGTGGATGATTCGTCAACATGCAGATTTTTCACGTAAAAGGAGT
AGAGAGAATATTAAATAA

Upstream 100 bases:

>100_bases
CTTCAATTGATAACGCAATGCTGCCTTTCTTCGAACGCAATTGTTCCCGTAAATAAACGAATTAGAACCCCGTTCCGACT
GAACGAGAAATTTTTCTTAA

Downstream 100 bases:

>100_bases
TTATTATATCGTTTTCTCTAAATTTATCTCTCACGCATTATTTTCTCTATATATTTAAAATTCTTGATTTATTATTAATA
TAATCCCCCATGTTAAATCA

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 565; Mature: 565

Protein sequence:

>565_residues
MNQTRVLLIFSWLTVATLLWMDWSKNKNETLEISASHNLGVDSNLELEHAVPQIHAGAVPLQKDSQLIAAAPKVPVINVT
TDVLQLKLDGFSILAADLLRFPQSKDRGAKPIKLLTDDPNYPYSATTGWVSQSNSPVPNLSTFLPEQPDVSYKLANDQNR
LVVPFIWTAANGVSIRRTFTFERGRYAILIRDEIRNSGETPWNAYVFRKLSRVPIPNILNRAMTNPDSFSFNGAVWYSEK
GGYERRAFKDYMNDGGLNREIGGGWIALLQHHFFTAWIPQKDQASLYLLAQNGSRDIAELRGPAFTVAPGQTTTTEARLW
VGPKLVEQITKEHVKGLDRVVDYSRFQLMALIGQGLFWILSHLNSLLHNWGWAIVGLVVLLRIAMYPLSASQYKSAAKMR
KFQPRLQQLKERYGEDRQKFQQAMMELYKKEKINPMGGCFPILIQMPIFFALYWVLVESVELRQAPWLGWIQDLTTRDPY
FILPLLNIVIMWATQKLTPTPAGMDPIAGKMMQVMPLIFGVMMAFVPSGLALYWVINGGLNLLIQWWMIRQHADFSRKRS
RENIK

Sequences:

>Translated_565_residues
MNQTRVLLIFSWLTVATLLWMDWSKNKNETLEISASHNLGVDSNLELEHAVPQIHAGAVPLQKDSQLIAAAPKVPVINVT
TDVLQLKLDGFSILAADLLRFPQSKDRGAKPIKLLTDDPNYPYSATTGWVSQSNSPVPNLSTFLPEQPDVSYKLANDQNR
LVVPFIWTAANGVSIRRTFTFERGRYAILIRDEIRNSGETPWNAYVFRKLSRVPIPNILNRAMTNPDSFSFNGAVWYSEK
GGYERRAFKDYMNDGGLNREIGGGWIALLQHHFFTAWIPQKDQASLYLLAQNGSRDIAELRGPAFTVAPGQTTTTEARLW
VGPKLVEQITKEHVKGLDRVVDYSRFQLMALIGQGLFWILSHLNSLLHNWGWAIVGLVVLLRIAMYPLSASQYKSAAKMR
KFQPRLQQLKERYGEDRQKFQQAMMELYKKEKINPMGGCFPILIQMPIFFALYWVLVESVELRQAPWLGWIQDLTTRDPY
FILPLLNIVIMWATQKLTPTPAGMDPIAGKMMQVMPLIFGVMMAFVPSGLALYWVINGGLNLLIQWWMIRQHADFSRKRS
RENIK
>Mature_565_residues
MNQTRVLLIFSWLTVATLLWMDWSKNKNETLEISASHNLGVDSNLELEHAVPQIHAGAVPLQKDSQLIAAAPKVPVINVT
TDVLQLKLDGFSILAADLLRFPQSKDRGAKPIKLLTDDPNYPYSATTGWVSQSNSPVPNLSTFLPEQPDVSYKLANDQNR
LVVPFIWTAANGVSIRRTFTFERGRYAILIRDEIRNSGETPWNAYVFRKLSRVPIPNILNRAMTNPDSFSFNGAVWYSEK
GGYERRAFKDYMNDGGLNREIGGGWIALLQHHFFTAWIPQKDQASLYLLAQNGSRDIAELRGPAFTVAPGQTTTTEARLW
VGPKLVEQITKEHVKGLDRVVDYSRFQLMALIGQGLFWILSHLNSLLHNWGWAIVGLVVLLRIAMYPLSASQYKSAAKMR
KFQPRLQQLKERYGEDRQKFQQAMMELYKKEKINPMGGCFPILIQMPIFFALYWVLVESVELRQAPWLGWIQDLTTRDPY
FILPLLNIVIMWATQKLTPTPAGMDPIAGKMMQVMPLIFGVMMAFVPSGLALYWVINGGLNLLIQWWMIRQHADFSRKRS
RENIK

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily

Homologues:

Organism=Escherichia coli, GI1790140, Length=576, Percent_Identity=35.9375, Blast_Score=333, Evalue=1e-92,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): OXAA_XYLF2 (B2IAR7)

Other databases:

- EMBL:   CP001011
- RefSeq:   YP_001830891.1
- ProteinModelPortal:   B2IAR7
- SMR:   B2IAR7
- GeneID:   6204063
- GenomeReviews:   CP001011_GR
- KEGG:   xfn:XfasM23_2224
- HOGENOM:   HBG507812
- OMA:   TYRGAAF
- ProtClustDB:   PRK01318
- HAMAP:   MF_01810
- InterPro:   IPR019998
- InterPro:   IPR001708
- PANTHER:   PTHR12428
- PRINTS:   PR00701
- PRINTS:   PR01900
- TIGRFAMs:   TIGR03593
- TIGRFAMs:   TIGR03592

Pfam domain/function: PF02096 60KD_IMP

EC number: NA

Molecular weight: Translated: 64380; Mature: 64380

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x15c45c80)-; HASH(0x16bc20cc)-; HASH(0x11bae99c)-; HASH(0x171d4a24)-; HASH(0x16cd5850)-; HASH(0x163f4834)-;

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQTRVLLIFSWLTVATLLWMDWSKNKNETLEISASHNLGVDSNLELEHAVPQIHAGAVP
CCCCEEEEHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHCCCCCCCCCC
LQKDSQLIAAAPKVPVINVTTDVLQLKLDGFSILAADLLRFPQSKDRGAKPIKLLTDDPN
CCCCCCEEEECCCCCEEEEEHHEEEEEECCHHHHHHHHHHCCCCCCCCCCCEEEEECCCC
YPYSATTGWVSQSNSPVPNLSTFLPEQPDVSYKLANDQNRLVVPFIWTAANGVSIRRTFT
CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEECCCCCCEEEEEEEECCCCCEEEEEEE
FERGRYAILIRDEIRNSGETPWNAYVFRKLSRVPIPNILNRAMTNPDSFSFNGAVWYSEK
ECCCCEEEEEEHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCEEEECCC
GGYERRAFKDYMNDGGLNREIGGGWIALLQHHFFTAWIPQKDQASLYLLAQNGSRDIAEL
CCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHEEECCCCCCCEEEEEECCCCCHHHHH
RGPAFTVAPGQTTTTEARLWVGPKLVEQITKEHVKGLDRVVDYSRFQLMALIGQGLFWIL
CCCEEEECCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SHLNSLLHNWGWAIVGLVVLLRIAMYPLSASQYKSAAKMRKFQPRLQQLKERYGEDRQKF
HHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
QQAMMELYKKEKINPMGGCFPILIQMPIFFALYWVLVESVELRQAPWLGWIQDLTTRDPY
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCE
FILPLLNIVIMWATQKLTPTPAGMDPIAGKMMQVMPLIFGVMMAFVPSGLALYWVINGGL
EHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCH
NLLIQWWMIRQHADFSRKRSRENIK
HHHHHHHHHHHHCCHHHHHHCCCCH
>Mature Secondary Structure
MNQTRVLLIFSWLTVATLLWMDWSKNKNETLEISASHNLGVDSNLELEHAVPQIHAGAVP
CCCCEEEEHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHCCCCCCCCCC
LQKDSQLIAAAPKVPVINVTTDVLQLKLDGFSILAADLLRFPQSKDRGAKPIKLLTDDPN
CCCCCCEEEECCCCCEEEEEHHEEEEEECCHHHHHHHHHHCCCCCCCCCCCEEEEECCCC
YPYSATTGWVSQSNSPVPNLSTFLPEQPDVSYKLANDQNRLVVPFIWTAANGVSIRRTFT
CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEECCCCCCEEEEEEEECCCCCEEEEEEE
FERGRYAILIRDEIRNSGETPWNAYVFRKLSRVPIPNILNRAMTNPDSFSFNGAVWYSEK
ECCCCEEEEEEHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCEEEECCC
GGYERRAFKDYMNDGGLNREIGGGWIALLQHHFFTAWIPQKDQASLYLLAQNGSRDIAEL
CCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHEEECCCCCCCEEEEEECCCCCHHHHH
RGPAFTVAPGQTTTTEARLWVGPKLVEQITKEHVKGLDRVVDYSRFQLMALIGQGLFWIL
CCCEEEECCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SHLNSLLHNWGWAIVGLVVLLRIAMYPLSASQYKSAAKMRKFQPRLQQLKERYGEDRQKF
HHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
QQAMMELYKKEKINPMGGCFPILIQMPIFFALYWVLVESVELRQAPWLGWIQDLTTRDPY
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCE
FILPLLNIVIMWATQKLTPTPAGMDPIAGKMMQVMPLIFGVMMAFVPSGLALYWVINGGL
EHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCH
NLLIQWWMIRQHADFSRKRSRENIK
HHHHHHHHHHHHCCHHHHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA