| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182682706
Identifier: 182682706
GI number: 182682706
Start: 2496017
End: 2496526
Strand: Direct
Name: 182682706
Synonym: XfasM23_2197
Alternate gene names: NA
Gene position: 2496017-2496526 (Clockwise)
Preceding gene: 182682705
Following gene: 182682707
Centisome position: 98.44
GC content: 39.61
Gene sequence:
>510_bases ATGACATTTAATGACATCATGAATAGGGTGCTTCCAGCACAAGATAAATCATCATCTCATCGTTTGGTTTTTCTATTGAC GATGATTTTTTTTGTTTTCTTGCAAAACGTCCATGCAAATAATGTACACACACCAACAATCAAGACCTCGAAAATGATAC CAGACGAAGATAGAGAGTATGCCGAGTCGATGTTTAAAGAACATCCTGAAATTTTCCCAAAGGGAAGGCGATCATCAATA TTACATGGGATCATCTTATTGGGGATGACTCCCTTTGAAGCAAAATTAGCCGGAGGCGCTTTTTTCTATAAGGTGACTGC CGACACATCCCGATGGCCGGAACATAGTGATCCAATGAAAGTAATGTGGGCGCAATCGATAAAACCAGATAATAGCGAAA TCTGGATGACCTTTAAAAACGCTTACCAGTTTCCTGGTGAAGGTGATATTCCATTTCGGGTTCACTTCAAAAAAGGTCAC GCTGTCAACATAGAGAAACTGGATAAATAA
Upstream 100 bases:
>100_bases ACACGGATTATCAAATATCTTATTTCTTCAAAAAGAAAGGCTGTTGGAAACTTGTAGAAATTGACAATCATTCATTTTAG ATAATTTAAGGAAAAATTAA
Downstream 100 bases:
>100_bases TATGTCAAGAAAGATTTTCACTCGCGGCATCTTGTTACTCCTGGCAACGGTATTCCTGGGGTTGGCCACAGCGTTTATTT TCTTTTATGGTCCTGATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MTFNDIMNRVLPAQDKSSSHRLVFLLTMIFFVFLQNVHANNVHTPTIKTSKMIPDEDREYAESMFKEHPEIFPKGRRSSI LHGIILLGMTPFEAKLAGGAFFYKVTADTSRWPEHSDPMKVMWAQSIKPDNSEIWMTFKNAYQFPGEGDIPFRVHFKKGH AVNIEKLDK
Sequences:
>Translated_169_residues MTFNDIMNRVLPAQDKSSSHRLVFLLTMIFFVFLQNVHANNVHTPTIKTSKMIPDEDREYAESMFKEHPEIFPKGRRSSI LHGIILLGMTPFEAKLAGGAFFYKVTADTSRWPEHSDPMKVMWAQSIKPDNSEIWMTFKNAYQFPGEGDIPFRVHFKKGH AVNIEKLDK >Mature_168_residues TFNDIMNRVLPAQDKSSSHRLVFLLTMIFFVFLQNVHANNVHTPTIKTSKMIPDEDREYAESMFKEHPEIFPKGRRSSIL HGIILLGMTPFEAKLAGGAFFYKVTADTSRWPEHSDPMKVMWAQSIKPDNSEIWMTFKNAYQFPGEGDIPFRVHFKKGHA VNIEKLDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19530; Mature: 19399
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFNDIMNRVLPAQDKSSSHRLVFLLTMIFFVFLQNVHANNVHTPTIKTSKMIPDEDREY CCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCHHHH AESMFKEHPEIFPKGRRSSILHGIILLGMTPFEAKLAGGAFFYKVTADTSRWPEHSDPMK HHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCEEEEEEECCCCCCCCCCCCCE VMWAQSIKPDNSEIWMTFKNAYQFPGEGDIPFRVHFKKGHAVNIEKLDK EEEECCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCEECHHCCCC >Mature Secondary Structure TFNDIMNRVLPAQDKSSSHRLVFLLTMIFFVFLQNVHANNVHTPTIKTSKMIPDEDREY CHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCHHHH AESMFKEHPEIFPKGRRSSILHGIILLGMTPFEAKLAGGAFFYKVTADTSRWPEHSDPMK HHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCEEEEEEECCCCCCCCCCCCCE VMWAQSIKPDNSEIWMTFKNAYQFPGEGDIPFRVHFKKGHAVNIEKLDK EEEECCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCEECHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA