| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is 182682705
Identifier: 182682705
GI number: 182682705
Start: 2495532
End: 2495996
Strand: Direct
Name: 182682705
Synonym: XfasM23_2196
Alternate gene names: NA
Gene position: 2495532-2495996 (Clockwise)
Preceding gene: 182682704
Following gene: 182682706
Centisome position: 98.42
GC content: 42.15
Gene sequence:
>465_bases ATGAAAAGAGTCTTGAAATTATTCATAGGATCTGTGTTTTTTATGGCTTACACCGTGGCTGCGGTCACGCCTGACACACA GAAAAATCAATCGCACGCCACAACAACACCTAGCGTGCCCTGTCCCGGAAAAGACTTTCCATCGTTTCTTGAAAAGTTCT CCAATGACGTCACTATCCAGCGGGCTTTCACCACGTATCCGCTGATAAAACATCAATATGATATTACTGCTCAACCCGAA CCAAAAGAATTCATTCAGATACTGCAACGCGAGCAAATTGAATTTCCCGTCATGCCACTGAGCCAAGAGCGGAGCAGGAT ACCCTTAGACATTGAAGTCATTAAACTCACCTCAAACAAGGCACAAGTTCGTGTTGTCAAGCCAGACACGGATTATCAAA TATCTTATTTCTTCAAAAAGAAAGGCTGTTGGAAACTTGTAGAAATTGACAATCATTCATTTTAG
Upstream 100 bases:
>100_bases CTATTTATAACCCTGGTTCCGATTTTCTCCCAGGGTCTGATGATGGCCCTAAAAAATATCTAGGTATTCTATTTCATCCA ATTTTAAATGGAGTTCAACA
Downstream 100 bases:
>100_bases ATAATTTAAGGAAAAATTAAATGACATTTAATGACATCATGAATAGGGTGCTTCCAGCACAAGATAAATCATCATCTCAT CGTTTGGTTTTTCTATTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MKRVLKLFIGSVFFMAYTVAAVTPDTQKNQSHATTTPSVPCPGKDFPSFLEKFSNDVTIQRAFTTYPLIKHQYDITAQPE PKEFIQILQREQIEFPVMPLSQERSRIPLDIEVIKLTSNKAQVRVVKPDTDYQISYFFKKKGCWKLVEIDNHSF
Sequences:
>Translated_154_residues MKRVLKLFIGSVFFMAYTVAAVTPDTQKNQSHATTTPSVPCPGKDFPSFLEKFSNDVTIQRAFTTYPLIKHQYDITAQPE PKEFIQILQREQIEFPVMPLSQERSRIPLDIEVIKLTSNKAQVRVVKPDTDYQISYFFKKKGCWKLVEIDNHSF >Mature_154_residues MKRVLKLFIGSVFFMAYTVAAVTPDTQKNQSHATTTPSVPCPGKDFPSFLEKFSNDVTIQRAFTTYPLIKHQYDITAQPE PKEFIQILQREQIEFPVMPLSQERSRIPLDIEVIKLTSNKAQVRVVKPDTDYQISYFFKKKGCWKLVEIDNHSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17833; Mature: 17833
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRVLKLFIGSVFFMAYTVAAVTPDTQKNQSHATTTPSVPCPGKDFPSFLEKFSNDVTIQ CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEE RAFTTYPLIKHQYDITAQPEPKEFIQILQREQIEFPVMPLSQERSRIPLDIEVIKLTSNK EECCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCC AQVRVVKPDTDYQISYFFKKKGCWKLVEIDNHSF EEEEEECCCCCCEEEEEEECCCCEEEEEECCCCC >Mature Secondary Structure MKRVLKLFIGSVFFMAYTVAAVTPDTQKNQSHATTTPSVPCPGKDFPSFLEKFSNDVTIQ CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEE RAFTTYPLIKHQYDITAQPEPKEFIQILQREQIEFPVMPLSQERSRIPLDIEVIKLTSNK EECCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCC AQVRVVKPDTDYQISYFFKKKGCWKLVEIDNHSF EEEEEECCCCCCEEEEEEECCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA