| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is rhlB [H]
Identifier: 182682666
GI number: 182682666
Start: 2435087
End: 2436721
Strand: Reverse
Name: rhlB [H]
Synonym: XfasM23_2156
Alternate gene names: 182682666
Gene position: 2436721-2435087 (Counterclockwise)
Preceding gene: 182682669
Following gene: 182682665
Centisome position: 96.1
GC content: 51.5
Gene sequence:
>1635_bases ATGATGAGCGATAAACCGTTGACAAATTTAAATTTTTCTTCATTTGATCTGCATCCAGCGTTGCTTACTGGGCTGACAAG AGCAGGATTTACACTCTGTACTCCGATCCAGGCGCTTACTCTTCCGGTTGCACTGGCTGGCCGTGATATTGCCGGCCAAG CCCAAACGGGAACCGGGAAAACTTTGGCGTTTTTGGTGGTGGTAGTTAACCGTTTACTTAGCAGTCCTGGGCTAGTCAAT CGTAACCCAGAAGATCCGCGTGCGTTGATTTTGGCGCCAACCCGTGAGCTTGCGATTCAAATCTATAACGATGCAGTGAA ATTTGGTGGCAATCTTGGGTTACGTTTTGCGTTGATTTATGGGGGCGTTGATTACGATAGGCAGCGCGAAATGTTGCGCA AAGGTGCGGATGTGGTCATTGCGACGCCGGGGCGCTTGATTGATTATCTTAAGCAGCACGAGGTGGTTTCGTTGCGCGTT TGTGAGATTTGCGTTCTTGATGAAGCAGATCGGATGTTTGACCTTGGGTTTATCAAGGACATTCGCTTTATATTGCGGCG TTTGCCCGAGCGTTGTAGCCGTCAGACTTTGCTGTTCTCAGCCACTCTCAGTCACCGCGTGTTGGAGTTGGCATATGAGT ATATGAATGAGCCAGAGAAGCTGGTGGCGGAGACTGAGAGTGTCACTACTACGCGTGTCCGTCAACGTATTTATTTCCCT GCTGAGGAGGAGAAAATCCCATTGCTCTTGGGTTTGCTCTCGCGTAACGAGGGGATGCGTACTATGGTGTTTGTCAATAC AAAGGTGTTCGTCGAAGGTGTTGCGCGCGCGCTTGATGAGGCTGGTTACCGGGTCGGTGTGCTGTCTGGAGATGTGCCAC AAAGGAAGCGAGAGACTTTGCTTAATCGTTTCCAGAAAGGGCAATTGGAAATACTGGTTGCCACAGATGTGGCTGCACGT GGATTGCACATTGATGGCGTTAATTACGTATACAACTACGACCTACCGTTTGATGCAGAAGATTACGTTCACCGTATTGG CCGTACTGCGCGTTTGGGAGCTGATGGTGATGCGATTAGTTTTGCCTGTGAGCGTTACGCGATGAGTTTGCCGGACATTG AGGCATATATCGAGCAGAAGATCCCGGTTGCAGCAGTGACTGCTGAGTTGTTGGCTCCATTGTCGCGTCCTGGACGTGCA TCGAATGGTAACGGTGATACTGTTGGAGATATTTCCCCACATTCTCGTGACGTGCTGGTTGCTCAGGAATGGCGTCGGGG TAAGCCCAGGGGTAGCCCTGGAGAGCGCGATGGTCGCATCCGTGTATGTAAAGGGACCCGGTCGGATGGGGGAGGTGGGC GCCGCCGCACTAAATTTCGCTTGGAGACCGAGCGTGATTCCAGTGTGGATGGGGCAGTCACTCCTGTATTTGGAGTGTCT ACGGGGATAGTATCTGCTCCAGGTAAAGAGGTGGGGCGAAACATCGGTCTCCGACGTCGTAGTCGTTCAATGGATTCTGG TGAAAGTGGCCATGTTGTCGCCACTGCCGACCAAGTGGCTGCTAAGTCAGGTAGTCAACCGTCGCTCTTAGGTCGAATAG GGCGCCGTATCCGCTCGCTGTTAAGTATGTTCTAA
Upstream 100 bases:
>100_bases CCTGAAGTGGCGCTAGCTTGCGCAAAGATTTCAGTTTGCGGTGCTTCTGTAATCCATGCAAGACGCCTCCGAGCCGCTCC AGATCCAAGACAAAGACTGA
Downstream 100 bases:
>100_bases GAAGATTGCCCTGGGCCAGGAAGCCCATTACTGCGTAGTCTTACGATGCTTCGATATGATTACGTGCATGAGTGTCCTTA GTTTCGATAATGTTAGTAAG
Product: ATP-dependent RNA helicase RhlB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 544; Mature: 544
Protein sequence:
>544_residues MMSDKPLTNLNFSSFDLHPALLTGLTRAGFTLCTPIQALTLPVALAGRDIAGQAQTGTGKTLAFLVVVVNRLLSSPGLVN RNPEDPRALILAPTRELAIQIYNDAVKFGGNLGLRFALIYGGVDYDRQREMLRKGADVVIATPGRLIDYLKQHEVVSLRV CEICVLDEADRMFDLGFIKDIRFILRRLPERCSRQTLLFSATLSHRVLELAYEYMNEPEKLVAETESVTTTRVRQRIYFP AEEEKIPLLLGLLSRNEGMRTMVFVNTKVFVEGVARALDEAGYRVGVLSGDVPQRKRETLLNRFQKGQLEILVATDVAAR GLHIDGVNYVYNYDLPFDAEDYVHRIGRTARLGADGDAISFACERYAMSLPDIEAYIEQKIPVAAVTAELLAPLSRPGRA SNGNGDTVGDISPHSRDVLVAQEWRRGKPRGSPGERDGRIRVCKGTRSDGGGGRRRTKFRLETERDSSVDGAVTPVFGVS TGIVSAPGKEVGRNIGLRRRSRSMDSGESGHVVATADQVAAKSGSQPSLLGRIGRRIRSLLSMF
Sequences:
>Translated_544_residues MMSDKPLTNLNFSSFDLHPALLTGLTRAGFTLCTPIQALTLPVALAGRDIAGQAQTGTGKTLAFLVVVVNRLLSSPGLVN RNPEDPRALILAPTRELAIQIYNDAVKFGGNLGLRFALIYGGVDYDRQREMLRKGADVVIATPGRLIDYLKQHEVVSLRV CEICVLDEADRMFDLGFIKDIRFILRRLPERCSRQTLLFSATLSHRVLELAYEYMNEPEKLVAETESVTTTRVRQRIYFP AEEEKIPLLLGLLSRNEGMRTMVFVNTKVFVEGVARALDEAGYRVGVLSGDVPQRKRETLLNRFQKGQLEILVATDVAAR GLHIDGVNYVYNYDLPFDAEDYVHRIGRTARLGADGDAISFACERYAMSLPDIEAYIEQKIPVAAVTAELLAPLSRPGRA SNGNGDTVGDISPHSRDVLVAQEWRRGKPRGSPGERDGRIRVCKGTRSDGGGGRRRTKFRLETERDSSVDGAVTPVFGVS TGIVSAPGKEVGRNIGLRRRSRSMDSGESGHVVATADQVAAKSGSQPSLLGRIGRRIRSLLSMF >Mature_544_residues MMSDKPLTNLNFSSFDLHPALLTGLTRAGFTLCTPIQALTLPVALAGRDIAGQAQTGTGKTLAFLVVVVNRLLSSPGLVN RNPEDPRALILAPTRELAIQIYNDAVKFGGNLGLRFALIYGGVDYDRQREMLRKGADVVIATPGRLIDYLKQHEVVSLRV CEICVLDEADRMFDLGFIKDIRFILRRLPERCSRQTLLFSATLSHRVLELAYEYMNEPEKLVAETESVTTTRVRQRIYFP AEEEKIPLLLGLLSRNEGMRTMVFVNTKVFVEGVARALDEAGYRVGVLSGDVPQRKRETLLNRFQKGQLEILVATDVAAR GLHIDGVNYVYNYDLPFDAEDYVHRIGRTARLGADGDAISFACERYAMSLPDIEAYIEQKIPVAAVTAELLAPLSRPGRA SNGNGDTVGDISPHSRDVLVAQEWRRGKPRGSPGERDGRIRVCKGTRSDGGGGRRRTKFRLETERDSSVDGAVTPVFGVS TGIVSAPGKEVGRNIGLRRRSRSMDSGESGHVVATADQVAAKSGSQPSLLGRIGRRIRSLLSMF
Specific function: Can carry out ATP-dependent unwinding of double stranded RNA. Has a role in RNA decay. Involved in the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI41327771, Length=411, Percent_Identity=36.9829683698297, Blast_Score=247, Evalue=2e-65, Organism=Homo sapiens, GI222352149, Length=380, Percent_Identity=40.7894736842105, Blast_Score=245, Evalue=8e-65, Organism=Homo sapiens, GI301171467, Length=389, Percent_Identity=37.5321336760925, Blast_Score=241, Evalue=2e-63, Organism=Homo sapiens, GI87196351, Length=389, Percent_Identity=37.5321336760925, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI301171475, Length=389, Percent_Identity=37.5321336760925, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI169881239, Length=397, Percent_Identity=36.7758186397985, Blast_Score=239, Evalue=7e-63, Organism=Homo sapiens, GI13514809, Length=397, Percent_Identity=36.7758186397985, Blast_Score=239, Evalue=7e-63, Organism=Homo sapiens, GI13518015, Length=363, Percent_Identity=38.8429752066116, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI216548263, Length=363, Percent_Identity=38.8429752066116, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI262118318, Length=363, Percent_Identity=38.8429752066116, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI262231852, Length=363, Percent_Identity=38.8429752066116, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI148613856, Length=362, Percent_Identity=39.5027624309392, Blast_Score=233, Evalue=5e-61, Organism=Homo sapiens, GI38201710, Length=362, Percent_Identity=39.5027624309392, Blast_Score=233, Evalue=5e-61, Organism=Homo sapiens, GI224593278, Length=370, Percent_Identity=39.1891891891892, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI20149629, Length=372, Percent_Identity=36.8279569892473, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI45446747, Length=359, Percent_Identity=37.0473537604457, Blast_Score=223, Evalue=5e-58, Organism=Homo sapiens, GI45446743, Length=359, Percent_Identity=37.0473537604457, Blast_Score=223, Evalue=5e-58, Organism=Homo sapiens, GI4758138, Length=361, Percent_Identity=38.781163434903, Blast_Score=222, Evalue=7e-58, Organism=Homo sapiens, GI41327773, Length=356, Percent_Identity=38.7640449438202, Blast_Score=219, Evalue=4e-57, Organism=Homo sapiens, GI21071032, Length=383, Percent_Identity=36.5535248041775, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI7661920, Length=374, Percent_Identity=34.7593582887701, Blast_Score=212, Evalue=6e-55, Organism=Homo sapiens, GI55749865, Length=357, Percent_Identity=36.4145658263305, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI13514831, Length=405, Percent_Identity=35.3086419753086, Blast_Score=205, Evalue=1e-52, Organism=Homo sapiens, GI188035877, Length=358, Percent_Identity=35.195530726257, Blast_Score=202, Evalue=9e-52, Organism=Homo sapiens, GI41327776, Length=372, Percent_Identity=33.8709677419355, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI31542656, Length=393, Percent_Identity=34.8600508905852, Blast_Score=196, Evalue=6e-50, Organism=Homo sapiens, GI50659095, Length=375, Percent_Identity=34.6666666666667, Blast_Score=195, Evalue=9e-50, Organism=Homo sapiens, GI51094101, Length=375, Percent_Identity=33.6, Blast_Score=195, Evalue=1e-49, Organism=Homo sapiens, GI164419743, Length=375, Percent_Identity=33.6, Blast_Score=195, Evalue=1e-49, Organism=Homo sapiens, GI41327779, Length=408, Percent_Identity=34.8039215686275, Blast_Score=189, Evalue=7e-48, Organism=Homo sapiens, GI13129006, Length=378, Percent_Identity=35.7142857142857, Blast_Score=189, Evalue=7e-48, Organism=Homo sapiens, GI164664518, Length=371, Percent_Identity=31.8059299191375, Blast_Score=186, Evalue=5e-47, Organism=Homo sapiens, GI83700235, Length=368, Percent_Identity=33.4239130434783, Blast_Score=179, Evalue=6e-45, Organism=Homo sapiens, GI38327634, Length=342, Percent_Identity=34.5029239766082, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI8922886, Length=396, Percent_Identity=31.8181818181818, Blast_Score=177, Evalue=3e-44, Organism=Homo sapiens, GI4758112, Length=390, Percent_Identity=30.2564102564103, Blast_Score=176, Evalue=5e-44, Organism=Homo sapiens, GI18375623, Length=390, Percent_Identity=30.2564102564103, Blast_Score=176, Evalue=5e-44, Organism=Homo sapiens, GI17505907, Length=410, Percent_Identity=29.7560975609756, Blast_Score=175, Evalue=8e-44, Organism=Homo sapiens, GI4503529, Length=373, Percent_Identity=31.9034852546917, Blast_Score=175, Evalue=8e-44, Organism=Homo sapiens, GI6005743, Length=394, Percent_Identity=31.9796954314721, Blast_Score=173, Evalue=3e-43, Organism=Homo sapiens, GI21040371, Length=384, Percent_Identity=30.7291666666667, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI38569505, Length=373, Percent_Identity=30.8310991957105, Blast_Score=165, Evalue=1e-40, Organism=Homo sapiens, GI38569503, Length=373, Percent_Identity=30.8310991957105, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI62241022, Length=368, Percent_Identity=32.0652173913043, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI256773275, Length=402, Percent_Identity=33.0845771144279, Blast_Score=159, Evalue=5e-39, Organism=Homo sapiens, GI164419732, Length=356, Percent_Identity=31.7415730337079, Blast_Score=159, Evalue=9e-39, Organism=Homo sapiens, GI256223453, Length=368, Percent_Identity=30.4347826086957, Blast_Score=158, Evalue=1e-38, Organism=Homo sapiens, GI62241024, Length=348, Percent_Identity=32.183908045977, Blast_Score=156, Evalue=6e-38, Organism=Homo sapiens, GI9506931, Length=400, Percent_Identity=29.25, Blast_Score=142, Evalue=6e-34, Organism=Homo sapiens, GI154759257, Length=421, Percent_Identity=29.9287410926366, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI20336298, Length=220, Percent_Identity=36.8181818181818, Blast_Score=134, Evalue=3e-31, Organism=Homo sapiens, GI9966805, Length=297, Percent_Identity=31.3131313131313, Blast_Score=125, Evalue=1e-28, Organism=Homo sapiens, GI4826686, Length=336, Percent_Identity=31.25, Blast_Score=118, Evalue=2e-26, Organism=Escherichia coli, GI1790214, Length=409, Percent_Identity=52.8117359413203, Blast_Score=419, Evalue=1e-118, Organism=Escherichia coli, GI1787016, Length=378, Percent_Identity=40.4761904761905, Blast_Score=268, Evalue=6e-73, Organism=Escherichia coli, GI87082221, Length=385, Percent_Identity=39.7402597402597, Blast_Score=248, Evalue=8e-67, Organism=Escherichia coli, GI1788930, Length=388, Percent_Identity=40.4639175257732, Blast_Score=233, Evalue=2e-62, Organism=Escherichia coli, GI1787605, Length=470, Percent_Identity=35.9574468085106, Blast_Score=232, Evalue=6e-62, Organism=Caenorhabditis elegans, GI71995718, Length=388, Percent_Identity=40.4639175257732, Blast_Score=250, Evalue=1e-66, Organism=Caenorhabditis elegans, GI17510309, Length=367, Percent_Identity=40.0544959128065, Blast_Score=238, Evalue=5e-63, Organism=Caenorhabditis elegans, GI17510307, Length=367, Percent_Identity=40.0544959128065, Blast_Score=238, Evalue=5e-63, Organism=Caenorhabditis elegans, GI71995514, Length=367, Percent_Identity=40.0544959128065, Blast_Score=238, Evalue=7e-63, Organism=Caenorhabditis elegans, GI86570094, Length=362, Percent_Identity=39.5027624309392, Blast_Score=231, Evalue=8e-61, Organism=Caenorhabditis elegans, GI17510559, Length=392, Percent_Identity=35.7142857142857, Blast_Score=229, Evalue=3e-60, Organism=Caenorhabditis elegans, GI115533224, Length=373, Percent_Identity=36.4611260053619, Blast_Score=228, Evalue=7e-60, Organism=Caenorhabditis elegans, GI32565321, Length=382, Percent_Identity=36.3874345549738, Blast_Score=228, Evalue=7e-60, Organism=Caenorhabditis elegans, GI17552642, Length=404, Percent_Identity=34.1584158415842, Blast_Score=221, Evalue=8e-58, Organism=Caenorhabditis elegans, GI17555296, Length=392, Percent_Identity=34.9489795918367, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17507877, Length=376, Percent_Identity=36.7021276595745, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI17507879, Length=372, Percent_Identity=37.3655913978495, Blast_Score=211, Evalue=9e-55, Organism=Caenorhabditis elegans, GI17507881, Length=370, Percent_Identity=35.6756756756757, Blast_Score=210, Evalue=1e-54, Organism=Caenorhabditis elegans, GI71995724, Length=374, Percent_Identity=34.4919786096257, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI17507121, Length=374, Percent_Identity=34.4919786096257, Blast_Score=209, Evalue=3e-54, Organism=Caenorhabditis elegans, GI71987143, Length=374, Percent_Identity=33.6898395721925, Blast_Score=207, Evalue=2e-53, Organism=Caenorhabditis elegans, GI17507945, Length=351, Percent_Identity=37.037037037037, Blast_Score=205, Evalue=4e-53, Organism=Caenorhabditis elegans, GI17537549, Length=366, Percent_Identity=36.3387978142077, Blast_Score=202, Evalue=4e-52, Organism=Caenorhabditis elegans, GI17509811, Length=371, Percent_Identity=34.7708894878706, Blast_Score=200, Evalue=1e-51, Organism=Caenorhabditis elegans, GI71999646, Length=380, Percent_Identity=32.6315789473684, Blast_Score=193, Evalue=2e-49, Organism=Caenorhabditis elegans, GI71999644, Length=380, Percent_Identity=32.6315789473684, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI17552114, Length=372, Percent_Identity=31.989247311828, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI115532546, Length=390, Percent_Identity=32.8205128205128, Blast_Score=183, Evalue=2e-46, Organism=Caenorhabditis elegans, GI115532548, Length=390, Percent_Identity=32.8205128205128, Blast_Score=183, Evalue=2e-46, Organism=Caenorhabditis elegans, GI17505370, Length=355, Percent_Identity=33.2394366197183, Blast_Score=177, Evalue=2e-44, Organism=Caenorhabditis elegans, GI193208216, Length=429, Percent_Identity=31.4685314685315, Blast_Score=171, Evalue=7e-43, Organism=Caenorhabditis elegans, GI71982858, Length=354, Percent_Identity=31.0734463276836, Blast_Score=166, Evalue=3e-41, Organism=Caenorhabditis elegans, GI17508543, Length=387, Percent_Identity=29.9741602067183, Blast_Score=166, Evalue=4e-41, Organism=Caenorhabditis elegans, GI71990816, Length=379, Percent_Identity=33.245382585752, Blast_Score=162, Evalue=6e-40, Organism=Caenorhabditis elegans, GI17507641, Length=385, Percent_Identity=32.987012987013, Blast_Score=159, Evalue=3e-39, Organism=Caenorhabditis elegans, GI17536103, Length=404, Percent_Identity=30.1980198019802, Blast_Score=155, Evalue=4e-38, Organism=Caenorhabditis elegans, GI17536101, Length=403, Percent_Identity=29.7766749379653, Blast_Score=155, Evalue=6e-38, Organism=Caenorhabditis elegans, GI17536099, Length=404, Percent_Identity=30.1980198019802, Blast_Score=155, Evalue=6e-38, Organism=Caenorhabditis elegans, GI193206561, Length=365, Percent_Identity=30.4109589041096, Blast_Score=154, Evalue=8e-38, Organism=Caenorhabditis elegans, GI32564046, Length=366, Percent_Identity=33.6065573770492, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI25148203, Length=422, Percent_Identity=26.5402843601896, Blast_Score=138, Evalue=8e-33, Organism=Caenorhabditis elegans, GI17556951, Length=364, Percent_Identity=30.2197802197802, Blast_Score=135, Evalue=4e-32, Organism=Caenorhabditis elegans, GI17553716, Length=370, Percent_Identity=27.5675675675676, Blast_Score=131, Evalue=1e-30, Organism=Caenorhabditis elegans, GI71997889, Length=357, Percent_Identity=28.2913165266106, Blast_Score=123, Evalue=2e-28, Organism=Caenorhabditis elegans, GI25148205, Length=348, Percent_Identity=25.8620689655172, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI71987152, Length=104, Percent_Identity=41.3461538461538, Blast_Score=93, Evalue=3e-19, Organism=Caenorhabditis elegans, GI71982862, Length=209, Percent_Identity=29.1866028708134, Blast_Score=92, Evalue=9e-19, Organism=Caenorhabditis elegans, GI25148291, Length=346, Percent_Identity=25.1445086705202, Blast_Score=92, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6324217, Length=366, Percent_Identity=40.9836065573771, Blast_Score=253, Evalue=8e-68, Organism=Saccharomyces cerevisiae, GI6325138, Length=406, Percent_Identity=38.6699507389163, Blast_Score=236, Evalue=8e-63, Organism=Saccharomyces cerevisiae, GI6321856, Length=419, Percent_Identity=35.0835322195704, Blast_Score=230, Evalue=5e-61, Organism=Saccharomyces cerevisiae, GI6324778, Length=419, Percent_Identity=36.7541766109785, Blast_Score=229, Evalue=1e-60, Organism=Saccharomyces cerevisiae, GI6321360, Length=363, Percent_Identity=38.8429752066116, Blast_Score=226, Evalue=7e-60, Organism=Saccharomyces cerevisiae, GI6323021, Length=365, Percent_Identity=36.1643835616438, Blast_Score=219, Evalue=6e-58, Organism=Saccharomyces cerevisiae, GI6320224, Length=384, Percent_Identity=33.59375, Blast_Score=213, Evalue=6e-56, Organism=Saccharomyces cerevisiae, GI6320173, Length=426, Percent_Identity=35.4460093896714, Blast_Score=207, Evalue=3e-54, Organism=Saccharomyces cerevisiae, GI6323947, Length=357, Percent_Identity=35.8543417366947, Blast_Score=202, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6320449, Length=383, Percent_Identity=34.7258485639687, Blast_Score=192, Evalue=9e-50, Organism=Saccharomyces cerevisiae, GI6320041, Length=379, Percent_Identity=33.245382585752, Blast_Score=192, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6321963, Length=387, Percent_Identity=35.4005167958656, Blast_Score=190, Evalue=4e-49, Organism=Saccharomyces cerevisiae, GI6322427, Length=359, Percent_Identity=33.7047353760446, Blast_Score=181, Evalue=4e-46, Organism=Saccharomyces cerevisiae, GI6322912, Length=372, Percent_Identity=32.258064516129, Blast_Score=176, Evalue=8e-45, Organism=Saccharomyces cerevisiae, GI6322323, Length=372, Percent_Identity=32.258064516129, Blast_Score=176, Evalue=8e-45, Organism=Saccharomyces cerevisiae, GI6319714, Length=382, Percent_Identity=30.6282722513089, Blast_Score=175, Evalue=1e-44, Organism=Saccharomyces cerevisiae, GI6320400, Length=418, Percent_Identity=32.2966507177034, Blast_Score=175, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6321267, Length=408, Percent_Identity=31.8627450980392, Blast_Score=172, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6324620, Length=381, Percent_Identity=32.8083989501312, Blast_Score=166, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6320119, Length=360, Percent_Identity=30, Blast_Score=164, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6321111, Length=368, Percent_Identity=30.7065217391304, Blast_Score=155, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6323306, Length=411, Percent_Identity=27.7372262773723, Blast_Score=146, Evalue=8e-36, Organism=Saccharomyces cerevisiae, GI6319618, Length=404, Percent_Identity=27.7227722772277, Blast_Score=135, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6322876, Length=465, Percent_Identity=28.3870967741935, Blast_Score=133, Evalue=7e-32, Organism=Saccharomyces cerevisiae, GI6324366, Length=414, Percent_Identity=24.8792270531401, Blast_Score=98, Evalue=3e-21, Organism=Drosophila melanogaster, GI28574962, Length=373, Percent_Identity=40.2144772117962, Blast_Score=254, Evalue=1e-67, Organism=Drosophila melanogaster, GI24584399, Length=359, Percent_Identity=38.9972144846797, Blast_Score=254, Evalue=2e-67, Organism=Drosophila melanogaster, GI24584994, Length=411, Percent_Identity=37.4695863746959, Blast_Score=244, Evalue=1e-64, Organism=Drosophila melanogaster, GI24662330, Length=365, Percent_Identity=40.2739726027397, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI21356161, Length=384, Percent_Identity=38.8020833333333, Blast_Score=243, Evalue=3e-64, Organism=Drosophila melanogaster, GI18857967, Length=368, Percent_Identity=39.4021739130435, Blast_Score=236, Evalue=2e-62, Organism=Drosophila melanogaster, GI24644483, Length=380, Percent_Identity=37.6315789473684, Blast_Score=232, Evalue=5e-61, Organism=Drosophila melanogaster, GI281361218, Length=380, Percent_Identity=37.6315789473684, Blast_Score=232, Evalue=5e-61, Organism=Drosophila melanogaster, GI24644481, Length=380, Percent_Identity=37.6315789473684, Blast_Score=232, Evalue=5e-61, Organism=Drosophila melanogaster, GI24644479, Length=380, Percent_Identity=37.6315789473684, Blast_Score=232, Evalue=5e-61, Organism=Drosophila melanogaster, GI24644487, Length=380, Percent_Identity=37.6315789473684, Blast_Score=232, Evalue=6e-61, Organism=Drosophila melanogaster, GI45551833, Length=380, Percent_Identity=37.6315789473684, Blast_Score=232, Evalue=6e-61, Organism=Drosophila melanogaster, GI24644485, Length=380, Percent_Identity=37.6315789473684, Blast_Score=232, Evalue=6e-61, Organism=Drosophila melanogaster, GI17985987, Length=401, Percent_Identity=37.9052369077307, Blast_Score=231, Evalue=8e-61, Organism=Drosophila melanogaster, GI24642151, Length=349, Percent_Identity=38.9684813753582, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI24645031, Length=374, Percent_Identity=34.2245989304813, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI21355075, Length=382, Percent_Identity=36.6492146596859, Blast_Score=214, Evalue=2e-55, Organism=Drosophila melanogaster, GI24585582, Length=368, Percent_Identity=35.3260869565217, Blast_Score=211, Evalue=1e-54, Organism=Drosophila melanogaster, GI281365720, Length=322, Percent_Identity=39.7515527950311, Blast_Score=211, Evalue=2e-54, Organism=Drosophila melanogaster, GI17977678, Length=358, Percent_Identity=34.6368715083799, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI17136814, Length=376, Percent_Identity=34.8404255319149, Blast_Score=197, Evalue=2e-50, Organism=Drosophila melanogaster, GI28575014, Length=369, Percent_Identity=33.8753387533875, Blast_Score=194, Evalue=2e-49, Organism=Drosophila melanogaster, GI24583279, Length=405, Percent_Identity=30.6172839506173, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI24583281, Length=405, Percent_Identity=30.6172839506173, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI28571808, Length=348, Percent_Identity=33.6206896551724, Blast_Score=184, Evalue=1e-46, Organism=Drosophila melanogaster, GI28571809, Length=348, Percent_Identity=33.6206896551724, Blast_Score=184, Evalue=1e-46, Organism=Drosophila melanogaster, GI24582080, Length=372, Percent_Identity=32.7956989247312, Blast_Score=181, Evalue=8e-46, Organism=Drosophila melanogaster, GI24582078, Length=372, Percent_Identity=32.7956989247312, Blast_Score=181, Evalue=8e-46, Organism=Drosophila melanogaster, GI17136248, Length=372, Percent_Identity=32.7956989247312, Blast_Score=181, Evalue=8e-46, Organism=Drosophila melanogaster, GI24582075, Length=372, Percent_Identity=32.7956989247312, Blast_Score=181, Evalue=8e-46, Organism=Drosophila melanogaster, GI21355559, Length=406, Percent_Identity=34.2364532019704, Blast_Score=167, Evalue=2e-41, Organism=Drosophila melanogaster, GI24642822, Length=370, Percent_Identity=31.3513513513514, Blast_Score=163, Evalue=2e-40, Organism=Drosophila melanogaster, GI24581954, Length=359, Percent_Identity=30.3621169916435, Blast_Score=163, Evalue=3e-40, Organism=Drosophila melanogaster, GI24581952, Length=359, Percent_Identity=30.3621169916435, Blast_Score=163, Evalue=3e-40, Organism=Drosophila melanogaster, GI24581956, Length=359, Percent_Identity=30.3621169916435, Blast_Score=163, Evalue=3e-40, Organism=Drosophila melanogaster, GI24643725, Length=410, Percent_Identity=28.780487804878, Blast_Score=160, Evalue=3e-39, Organism=Drosophila melanogaster, GI24666101, Length=374, Percent_Identity=32.620320855615, Blast_Score=160, Evalue=3e-39, Organism=Drosophila melanogaster, GI17647335, Length=366, Percent_Identity=31.1475409836066, Blast_Score=159, Evalue=6e-39, Organism=Drosophila melanogaster, GI20130173, Length=444, Percent_Identity=29.5045045045045, Blast_Score=156, Evalue=4e-38, Organism=Drosophila melanogaster, GI19920478, Length=361, Percent_Identity=29.0858725761773, Blast_Score=139, Evalue=4e-33, Organism=Drosophila melanogaster, GI24668515, Length=329, Percent_Identity=32.2188449848024, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI28571338, Length=439, Percent_Identity=26.879271070615, Blast_Score=126, Evalue=4e-29, Organism=Drosophila melanogaster, GI18859659, Length=439, Percent_Identity=26.879271070615, Blast_Score=126, Evalue=5e-29, Organism=Drosophila melanogaster, GI24640164, Length=372, Percent_Identity=27.6881720430108, Blast_Score=120, Evalue=3e-27, Organism=Drosophila melanogaster, GI17136666, Length=402, Percent_Identity=28.1094527363184, Blast_Score=112, Evalue=6e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR022077 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF12300 DUF3628; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 59825; Mature: 59825
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSDKPLTNLNFSSFDLHPALLTGLTRAGFTLCTPIQALTLPVALAGRDIAGQAQTGTGK CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHCCHHHHHHHHHCCCCCCCCCCCCCCCH TLAFLVVVVNRLLSSPGLVNRNPEDPRALILAPTRELAIQIYNDAVKFGGNLGLRFALIY HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCEEEEEEE GGVDYDRQREMLRKGADVVIATPGRLIDYLKQHEVVSLRVCEICVLDEADRMFDLGFIKD CCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHCCEEEEEEEEEEEECCCCHHHHHHHHHH IRFILRRLPERCSRQTLLFSATLSHRVLELAYEYMNEPEKLVAETESVTTTRVRQRIYFP HHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC AEEEKIPLLLGLLSRNEGMRTMVFVNTKVFVEGVARALDEAGYRVGVLSGDVPQRKRETL CCCCCCCCEEEEHHCCCCCEEEEEEEHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHH LNRFQKGQLEILVATDVAARGLHIDGVNYVYNYDLPFDAEDYVHRIGRTARLGADGDAIS HHHHCCCCEEEEEEECCCCCCEEECCCCEEEECCCCCCHHHHHHHCCCCEECCCCCCHHH FACERYAMSLPDIEAYIEQKIPVAAVTAELLAPLSRPGRASNGNGDTVGDISPHSRDVLV HHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEE AQEWRRGKPRGSPGERDGRIRVCKGTRSDGGGGRRRTKFRLETERDSSVDGAVTPVFGVS EHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHCCC TGIVSAPGKEVGRNIGLRRRSRSMDSGESGHVVATADQVAAKSGSQPSLLGRIGRRIRSL CCCCCCCCHHHHHCCCCHHHHCCCCCCCCCCEEEEHHHHHHCCCCCCHHHHHHHHHHHHH LSMF HHCC >Mature Secondary Structure MMSDKPLTNLNFSSFDLHPALLTGLTRAGFTLCTPIQALTLPVALAGRDIAGQAQTGTGK CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHCCHHHHHHHHHCCCCCCCCCCCCCCCH TLAFLVVVVNRLLSSPGLVNRNPEDPRALILAPTRELAIQIYNDAVKFGGNLGLRFALIY HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCEEEEEEE GGVDYDRQREMLRKGADVVIATPGRLIDYLKQHEVVSLRVCEICVLDEADRMFDLGFIKD CCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHCCEEEEEEEEEEEECCCCHHHHHHHHHH IRFILRRLPERCSRQTLLFSATLSHRVLELAYEYMNEPEKLVAETESVTTTRVRQRIYFP HHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC AEEEKIPLLLGLLSRNEGMRTMVFVNTKVFVEGVARALDEAGYRVGVLSGDVPQRKRETL CCCCCCCCEEEEHHCCCCCEEEEEEEHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHH LNRFQKGQLEILVATDVAARGLHIDGVNYVYNYDLPFDAEDYVHRIGRTARLGADGDAIS HHHHCCCCEEEEEEECCCCCCEEECCCCEEEECCCCCCHHHHHHHCCCCEECCCCCCHHH FACERYAMSLPDIEAYIEQKIPVAAVTAELLAPLSRPGRASNGNGDTVGDISPHSRDVLV HHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEE AQEWRRGKPRGSPGERDGRIRVCKGTRSDGGGGRRRTKFRLETERDSSVDGAVTPVFGVS EHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHCCC TGIVSAPGKEVGRNIGLRRRSRSMDSGESGHVVATADQVAAKSGSQPSLLGRIGRRIRSL CCCCCCCCHHHHHCCCCHHHHCCCCCCCCCCEEEEHHHHHHCCCCCCHHHHHHHHHHHHH LSMF HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]