Click here to switch to the map view.

The map label for this gene is secE

Identifier: 182682625

GI number: 182682625

Start: 2383743

End: 2384150

Strand: Reverse

Name: secE

Synonym: XfasM23_2113

Alternate gene names: 182682625

Gene position: 2384150-2383743 (Counterclockwise)

Preceding gene: 182682626

Following gene: 182682624

Centisome position: 94.02

GC content: 42.89

Gene sequence:

>408_bases
ATGAAAACAAAAATCGAACCTATTAAAAGCACCGTTCTTAGCGGAGATATTTTCAAATACTTCATTGCTAGTTTGCTATT
GGTGTTAGGGGTGTTTGTATGGTTTTTGTTTAGTAGAGCTGTGGATTTTCTTATGCTAGGTTCTTGGGGTCCACAGTTGC
GTGGTTTGGTTGTTATTCTCGTTTTCGTCGCTGCTGTATCGGTGCTTATGACTACAGCAAGGGGCCGTGAATTTCGTGGG
TTCTTGTTTGAGTCCCGTTTTGAGTTGCGTAAGGTGGTCTGGCCTACTCGTCACGAGGCTATTCGTATCACTTGGGTTGT
AATTGTCATGATTACTATACTAAGTTTGTTGTTGGGTGGCTTTGATTTCGTGATACAGAAGCTCACGCAGTGGTTCCTAT
CGCGTTGA

Upstream 100 bases:

>100_bases
CAGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGAGTCCCTCCTGGCGCGCCACTTTCTTCCTGGTTTGTGACTTGGCTCA
AATCGGTAAATTAAATCCTG

Downstream 100 bases:

>100_bases
GGAGGATTAAACTGTGAAGCGCTGGTATGTTGTTCATGCCTATTCAGGTTTTGAGAAGTCAGTTGCGCAGGCGTTGCGTG
ATCGTATTTCTCGTATTGAG

Product: preprotein translocase subunit SecE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MKTKIEPIKSTVLSGDIFKYFIASLLLVLGVFVWFLFSRAVDFLMLGSWGPQLRGLVVILVFVAAVSVLMTTARGREFRG
FLFESRFELRKVVWPTRHEAIRITWVVIVMITILSLLLGGFDFVIQKLTQWFLSR

Sequences:

>Translated_135_residues
MKTKIEPIKSTVLSGDIFKYFIASLLLVLGVFVWFLFSRAVDFLMLGSWGPQLRGLVVILVFVAAVSVLMTTARGREFRG
FLFESRFELRKVVWPTRHEAIRITWVVIVMITILSLLLGGFDFVIQKLTQWFLSR
>Mature_135_residues
MKTKIEPIKSTVLSGDIFKYFIASLLLVLGVFVWFLFSRAVDFLMLGSWGPQLRGLVVILVFVAAVSVLMTTARGREFRG
FLFESRFELRKVVWPTRHEAIRITWVVIVMITILSLLLGGFDFVIQKLTQWFLSR

Specific function: Essential for protein export [H]

COG id: COG0690

COG function: function code U; Preprotein translocase subunit SecE

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secE/SEC61-gamma family [H]

Homologues:

Organism=Escherichia coli, GI1790413, Length=76, Percent_Identity=38.1578947368421, Blast_Score=60, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001901
- InterPro:   IPR005807 [H]

Pfam domain/function: PF00584 SecE [H]

EC number: NA

Molecular weight: Translated: 15558; Mature: 15558

Theoretical pI: Translated: 11.53; Mature: 11.53

Prosite motif: PS01067 SECE_SEC61G

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKIEPIKSTVLSGDIFKYFIASLLLVLGVFVWFLFSRAVDFLMLGSWGPQLRGLVVIL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VFVAAVSVLMTTARGREFRGFLFESRFELRKVVWPTRHEAIRITWVVIVMITILSLLLGG
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
FDFVIQKLTQWFLSR
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MKTKIEPIKSTVLSGDIFKYFIASLLLVLGVFVWFLFSRAVDFLMLGSWGPQLRGLVVIL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VFVAAVSVLMTTARGREFRGFLFESRFELRKVVWPTRHEAIRITWVVIVMITILSLLLGG
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
FDFVIQKLTQWFLSR
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]