Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682505
Identifier: 182682505
GI number: 182682505
Start: 2231213
End: 2231953
Strand: Reverse
Name: 182682505
Synonym: XfasM23_1992
Alternate gene names: NA
Gene position: 2231953-2231213 (Counterclockwise)
Preceding gene: 182682506
Following gene: 182682504
Centisome position: 88.02
GC content: 54.52
Gene sequence:
>741_bases ATGTTCAAGCGCACAGAAGAACCTGAGTCAGTTTCAGAGACATCTGTCCCGACGTGGGTGCTCGGTGTGACCGTCCTGTT GGCGTTGGCTTATGTGTTGTTGGCCCACTGGGCCAATACGACGCATCGTTCATGGCTGGCGGTCCTGGCTTTTGTTGCTT TGGTGCTGATGGGGCTGGTCAAGCCAATCGCACGTGGCCGCATCTGGGCGTGTGGTGCCGCATTGCTGCTGTTGGTGGCC ATCGTGCCGCTATGGGAGTCGCCTCATGTGTTGCTGCTGTTGGCGCTGTCGCCGGTGGTGTCCATGGGGTGGGTTGCTTG GTTCTTCGGGGGCAGTTTGCGTCATGGTCATATTCCGCTGATTACCCGTATCGTTGAAGGATTGCATCGTCAAGCTGGCC AGAATATCGGCCCGCTCCAGTATCGTTACGGCCGCCGTTTGACGCTGTTATGGACGGTGTTGCTGACGGGGCTGACGGTG GTGAATGGTGTGCTTGAGTTGTGTGCGGTACCCAGTGGGGTGCTCGCTCAGCTTGGTCAGCAACCGTGGCTGGTGATTCC TGATGGAAGTGTTTCAGTCTATGTGAATCTTTTGGATTACGCGTTGATTGGTATTTTCTTCATTGGGGAATATGTATTGC GTGGATACTGGTTTCCACAGCGTCCATATCGGAATTTTGTGGATTTTTTGCGCCAAATGGTGCGTTTAGGGCCTGAGTTC TGGCGTCATTTTTTGCGCTGA
Upstream 100 bases:
>100_bases GAATTGGCTCTGGTGATTACCAAGCGTTATGGTTTCCAGATGCGTTCGGACAATGATGACAACCAACGTATCTTTGCTTC GCTGCGTGCGCTTTCAGATC
Downstream 100 bases:
>100_bases GTGCGGCGCTGCTTGGGGGTAATCCCTGTGCATGATGTGTTGTTAGGTCGTGTGTGCGGTGTTGTGGTCGTGATCCTGCT GTCTCGCGTGTGGGGACGCG
Product: ketosynthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MFKRTEEPESVSETSVPTWVLGVTVLLALAYVLLAHWANTTHRSWLAVLAFVALVLMGLVKPIARGRIWACGAALLLLVA IVPLWESPHVLLLLALSPVVSMGWVAWFFGGSLRHGHIPLITRIVEGLHRQAGQNIGPLQYRYGRRLTLLWTVLLTGLTV VNGVLELCAVPSGVLAQLGQQPWLVIPDGSVSVYVNLLDYALIGIFFIGEYVLRGYWFPQRPYRNFVDFLRQMVRLGPEF WRHFLR
Sequences:
>Translated_246_residues MFKRTEEPESVSETSVPTWVLGVTVLLALAYVLLAHWANTTHRSWLAVLAFVALVLMGLVKPIARGRIWACGAALLLLVA IVPLWESPHVLLLLALSPVVSMGWVAWFFGGSLRHGHIPLITRIVEGLHRQAGQNIGPLQYRYGRRLTLLWTVLLTGLTV VNGVLELCAVPSGVLAQLGQQPWLVIPDGSVSVYVNLLDYALIGIFFIGEYVLRGYWFPQRPYRNFVDFLRQMVRLGPEF WRHFLR >Mature_246_residues MFKRTEEPESVSETSVPTWVLGVTVLLALAYVLLAHWANTTHRSWLAVLAFVALVLMGLVKPIARGRIWACGAALLLLVA IVPLWESPHVLLLLALSPVVSMGWVAWFFGGSLRHGHIPLITRIVEGLHRQAGQNIGPLQYRYGRRLTLLWTVLLTGLTV VNGVLELCAVPSGVLAQLGQQPWLVIPDGSVSVYVNLLDYALIGIFFIGEYVLRGYWFPQRPYRNFVDFLRQMVRLGPEF WRHFLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27688; Mature: 27688
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKRTEEPESVSETSVPTWVLGVTVLLALAYVLLAHWANTTHRSWLAVLAFVALVLMGLV CCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH KPIARGRIWACGAALLLLVAIVPLWESPHVLLLLALSPVVSMGWVAWFFGGSLRHGHIPL HHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH ITRIVEGLHRQAGQNIGPLQYRYGRRLTLLWTVLLTGLTVVNGVLELCAVPSGVLAQLGQ HHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC QPWLVIPDGSVSVYVNLLDYALIGIFFIGEYVLRGYWFPQRPYRNFVDFLRQMVRLGPEF CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHH WRHFLR HHHHCC >Mature Secondary Structure MFKRTEEPESVSETSVPTWVLGVTVLLALAYVLLAHWANTTHRSWLAVLAFVALVLMGLV CCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH KPIARGRIWACGAALLLLVAIVPLWESPHVLLLLALSPVVSMGWVAWFFGGSLRHGHIPL HHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH ITRIVEGLHRQAGQNIGPLQYRYGRRLTLLWTVLLTGLTVVNGVLELCAVPSGVLAQLGQ HHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC QPWLVIPDGSVSVYVNLLDYALIGIFFIGEYVLRGYWFPQRPYRNFVDFLRQMVRLGPEF CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHH WRHFLR HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA