Definition | Xylella fastidiosa M23 chromosome, complete genome. |
---|---|
Accession | NC_010577 |
Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is 182682492
Identifier: 182682492
GI number: 182682492
Start: 2219818
End: 2219979
Strand: Reverse
Name: 182682492
Synonym: XfasM23_1979
Alternate gene names: NA
Gene position: 2219979-2219818 (Counterclockwise)
Preceding gene: 182682493
Following gene: 182682491
Centisome position: 87.55
GC content: 33.33
Gene sequence:
>162_bases GTGGGTTATTTTAAGCAGGAAGATGAATTCTCCATCTATTGGAATACTGCGCTTGTTTTATCTGATGATGGTGGGTTTTT TATTTGGAATTTGTGTGTGTCCAATCGATCAGTGGAGGATGTCTTGGTATTAATGTTGATCAGTATAAATATTAAAATTT AA
Upstream 100 bases:
>100_bases GGGCTGGGTGATTGCAATGCTGGTTATGGATGCTCAGCGCGGAGATGTGCGTTTGTCTTTGATATCAATGTAATTTCCCG AGTAATGGAATCCTATTTCT
Downstream 100 bases:
>100_bases TATTAATTAATGAGTGAATTCAGGATTAATTTTATATAAGGGGTATGTGCGGTGAATGCTATTAGTGGTTCTAGTGGTTC TAGTGGTTCTAGTGGTTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 53; Mature: 52
Protein sequence:
>53_residues MGYFKQEDEFSIYWNTALVLSDDGGFFIWNLCVSNRSVEDVLVLMLISINIKI
Sequences:
>Translated_53_residues MGYFKQEDEFSIYWNTALVLSDDGGFFIWNLCVSNRSVEDVLVLMLISINIKI >Mature_52_residues GYFKQEDEFSIYWNTALVLSDDGGFFIWNLCVSNRSVEDVLVLMLISINIKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6148; Mature: 6017
Theoretical pI: Translated: 3.94; Mature: 3.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYFKQEDEFSIYWNTALVLSDDGGFFIWNLCVSNRSVEDVLVLMLISINIKI CCCCCCCCCEEEEEEEEEEEECCCCEEEEEEEECCCCHHHHHEEEEEEEEEEC >Mature Secondary Structure GYFKQEDEFSIYWNTALVLSDDGGFFIWNLCVSNRSVEDVLVLMLISINIKI CCCCCCCCEEEEEEEEEEEECCCCEEEEEEEECCCCHHHHHEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA