Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682470
Identifier: 182682470
GI number: 182682470
Start: 2193670
End: 2194518
Strand: Direct
Name: 182682470
Synonym: XfasM23_1957
Alternate gene names: NA
Gene position: 2193670-2194518 (Clockwise)
Preceding gene: 182682468
Following gene: 182682474
Centisome position: 86.51
GC content: 56.65
Gene sequence:
>849_bases ATGGAGACACCCCACTACACCGGTCCTTTGCTGACCCTGGACATTGGTCATGCGCTGCAGGAGGCCCGCAGCCGCGGGGC GGCGACCTGGTCAGGCTCCTTGGACTTGGGGCGCACGCATACGCAAGTACGGATCGCTACCGATGCTTGGCATGCCAAAA CACAGGCTTATCCGTATCCGAACCGATTGAAAGACCGCACGATTTACTATTGGGATGGTCAAAACTTCACCGCAATTTCG CGGTTCAGTGGCTCGCTCATCAAGTTAGTGCCTACTCCGTGGGGGGCACCGACGTTCGAGATTGATGGCATCAAGATGTT ACCGTCCCTGCGTGTGTCTCCTTTCGAGGACGCACGACGCAAAGTGGCTCTGGTCAGGCCACAAGGGAAGACGGTGTTGG ACACGTGCGGTGGACTCGGCTATTTCGCAGCCTGCTGTCTGGAAGCCGGTGCGATTCACATCCGGTCGTTTGAGAAAAAT CCTGATGTTCTTTGGCTACGCACGCTCAATCCTTGGTCTCCAAATCCTCAGGCGATACAGGCTAATCAGCGCCTTGAGTT GGTTGGTGGGGACATTGAGCAAGCCATTGAGGATCTACCGGATGCCAGTGTGGATGCCATTGTTCACGATCCGCCACGCT TCAGTATTGCCGGGGAGTTATACGCGCTACGTTTTTACGATCAGTTGGCACGGGTGCTGTGCCGTGGCGGGCAGATGTTC CACTACACCGGCTCACCAACTCAGCTGAGTCATGGCCGTGATGTGCCTCGTGAGATCGCACGACGCCTGGAGCAGGCGGG TTTCCAAAGTACGCTGATCCTAGATGGGGTGTTGGCACAACGCCGTTAA
Upstream 100 bases:
>100_bases GTAAGCACAGCGCAATACCCAAGCAGATCGGCTACTCACCTGCATCTGGCTCGGGTAGGATCCCAGGCTTCTTTTTTGCC AAGCAGTCTTGCCAGCTTCG
Downstream 100 bases:
>100_bases TATGCATTGTGCAGAAATGATGAGAGGGGACTAGTGATTCACAGCAGTGGGTCAGGGTGATGAGGAGGATACTCGGCACA CTCTCATTGACCTTCGGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues METPHYTGPLLTLDIGHALQEARSRGAATWSGSLDLGRTHTQVRIATDAWHAKTQAYPYPNRLKDRTIYYWDGQNFTAIS RFSGSLIKLVPTPWGAPTFEIDGIKMLPSLRVSPFEDARRKVALVRPQGKTVLDTCGGLGYFAACCLEAGAIHIRSFEKN PDVLWLRTLNPWSPNPQAIQANQRLELVGGDIEQAIEDLPDASVDAIVHDPPRFSIAGELYALRFYDQLARVLCRGGQMF HYTGSPTQLSHGRDVPREIARRLEQAGFQSTLILDGVLAQRR
Sequences:
>Translated_282_residues METPHYTGPLLTLDIGHALQEARSRGAATWSGSLDLGRTHTQVRIATDAWHAKTQAYPYPNRLKDRTIYYWDGQNFTAIS RFSGSLIKLVPTPWGAPTFEIDGIKMLPSLRVSPFEDARRKVALVRPQGKTVLDTCGGLGYFAACCLEAGAIHIRSFEKN PDVLWLRTLNPWSPNPQAIQANQRLELVGGDIEQAIEDLPDASVDAIVHDPPRFSIAGELYALRFYDQLARVLCRGGQMF HYTGSPTQLSHGRDVPREIARRLEQAGFQSTLILDGVLAQRR >Mature_282_residues METPHYTGPLLTLDIGHALQEARSRGAATWSGSLDLGRTHTQVRIATDAWHAKTQAYPYPNRLKDRTIYYWDGQNFTAIS RFSGSLIKLVPTPWGAPTFEIDGIKMLPSLRVSPFEDARRKVALVRPQGKTVLDTCGGLGYFAACCLEAGAIHIRSFEKN PDVLWLRTLNPWSPNPQAIQANQRLELVGGDIEQAIEDLPDASVDAIVHDPPRFSIAGELYALRFYDQLARVLCRGGQMF HYTGSPTQLSHGRDVPREIARRLEQAGFQSTLILDGVLAQRR
Specific function: Unknown
COG id: COG2521
COG function: function code R; Predicted archaeal methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 31434; Mature: 31434
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METPHYTGPLLTLDIGHALQEARSRGAATWSGSLDLGRTHTQVRIATDAWHAKTQAYPYP CCCCCCCCCEEEEEHHHHHHHHHHCCCEEECCCCCCCCCCEEEEEEECCHHCCCCCCCCC NRLKDRTIYYWDGQNFTAISRFSGSLIKLVPTPWGAPTFEIDGIKMLPSLRVSPFEDARR CCCCCCEEEEECCCCEEEEECCCCCEEEEEECCCCCCEEEECCEEECCCCCCCCHHHHHC KVALVRPQGKTVLDTCGGLGYFAACCLEAGAIHIRSFEKNPDVLWLRTLNPWSPNPQAIQ EEEEECCCCCCHHHHCCCHHHHHHHHHHCCEEEEEEECCCCCEEEEEECCCCCCCCCEEE ANQRLELVGGDIEQAIEDLPDASVDAIVHDPPRFSIAGELYALRFYDQLARVLCRGGQMF CCCEEEEECCCHHHHHHHCCCCCCCEEEECCCCEEECHHHHHHHHHHHHHHHHHCCCCEE HYTGSPTQLSHGRDVPREIARRLEQAGFQSTLILDGVLAQRR EECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHCCC >Mature Secondary Structure METPHYTGPLLTLDIGHALQEARSRGAATWSGSLDLGRTHTQVRIATDAWHAKTQAYPYP CCCCCCCCCEEEEEHHHHHHHHHHCCCEEECCCCCCCCCCEEEEEEECCHHCCCCCCCCC NRLKDRTIYYWDGQNFTAISRFSGSLIKLVPTPWGAPTFEIDGIKMLPSLRVSPFEDARR CCCCCCEEEEECCCCEEEEECCCCCEEEEEECCCCCCEEEECCEEECCCCCCCCHHHHHC KVALVRPQGKTVLDTCGGLGYFAACCLEAGAIHIRSFEKNPDVLWLRTLNPWSPNPQAIQ EEEEECCCCCCHHHHCCCHHHHHHHHHHCCEEEEEEECCCCCEEEEEECCCCCCCCCEEE ANQRLELVGGDIEQAIEDLPDASVDAIVHDPPRFSIAGELYALRFYDQLARVLCRGGQMF CCCEEEEECCCHHHHHHHCCCCCCCEEEECCCCEEECHHHHHHHHHHHHHHHHHCCCCEE HYTGSPTQLSHGRDVPREIARRLEQAGFQSTLILDGVLAQRR EECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]