Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682412
Identifier: 182682412
GI number: 182682412
Start: 2111136
End: 2112467
Strand: Reverse
Name: 182682412
Synonym: XfasM23_1898
Alternate gene names: NA
Gene position: 2112467-2111136 (Counterclockwise)
Preceding gene: 182682416
Following gene: 182682411
Centisome position: 83.31
GC content: 56.23
Gene sequence:
>1332_bases ATGTCTGTTGACTCTGTCTCACGTAAGCATGACCGGATTCCGTTTATTCGTTTTCTCGGTGTTTACTTATTGTTTCAATG GCGACGCCAGTGCGCGCGGTTACATCGTGCTCGTATTGCGTTGTATTCCCGCCGTTTCGGGCAGTGGATCCAGTTGCGTG CTGCTGTTTCTGCTGACCAGTCAGCACCGCCCAGTGTTGCTGCTGTTGTGCCTGCCAGTGCGACGCAGACCCCCACCAAT ACCCGCTGTATTTTGCTCATTGATACTGTGCCCCCGCGTCCAGACCGCGATTCAGGCTCATTGCGCTGCCATCATTTAAT GCATTTGATGGTTTGCATGGGCTATAACGTGGTGCTGCACTGCCAGGAACGCATGCCAAGCGCTGCGGAGATCATGGCAT TACGTGCGATCGGCGTTACAACCACCGCCGTTGCGGGTGGCTTCCCATCCTGGCTCCTGACCAACCCAGAGCGTTATTGT GCTGTTGTAGTTTGTCGTTACCACCTTGGCCTGTCTTGGTTGCCCTTACTACGAACCTTCGTACCTGACAGCCTTTGCAT CTTGGATACAGTCGATTTACACCACCTGCGTGAGCAACGCGAAGCCGAGTTACGCAATCTGAGTGGCCTGCGTGCTGCTG CGGCCATCACGCGCCGCCATGAATTGCATGCGATCAGTTGCGCTGATCTAGTGTGGGTGGTGAGTCCTGTTGAACGCGAC TATTTGGGCAGATTGCTGCCGCAGGCGCGTGTTGAGGTGGTACCGAACATGCATGACATGGTCGAGACGATTCCTCCGTT CGTGTCCCGGCATGGTTTTCTGTTCGTCGGGGGGAGTCGTCATCCACCCAATGTGGATGCAGTTCGCTGGCTGCTGTCTG AGATTTTCCCACGCATCCGTGAACGGCTACCTGATGCACAGTTGCACTTGGTGGGTGCCGGACTGGCTGAAGCGATACAG AGTCAGCAGATGATATGTCCCGGAGTCAGTTTCCACGGTCATGTGCCACAGATGGCACCTTTACTCCACGCCTGCCGAGT CAGCCTTGCTCCGCTGCGCTTTGGTGCCGGTGTCAAAGGTAAGATCAGTGAGGCCTTGGCCTACGGTCTGCCCGTGGTGA CGACACCTGAGGGAGCCGAAGGCATGTACCTGCGCTCCGGTATGGATGCCTTAATCAGCCGCGATGCCGAAGACTTGGCC AGACAGGCAGTGTGTGCACATGAAGATCTGGAGGTGTGGCAACGCCTCTCAGACAATGGGCAACAGATCATCAAGCAGCA CTTCTCGCTGCACAGTACGCGTGCTGCTCTGGCGGCCATGCTTCCCCATTGA
Upstream 100 bases:
>100_bases CGGCATGTTGCCATTTGACGCTTCGTTGAAATCATCTTCTGCGTGGTATGCCACGGGTATGTGAGAATTAGGACTTTATG GAGTCTAGCGCAACACCTAC
Downstream 100 bases:
>100_bases AGGATTACTCTAGAGTCATTTATGTCACTGTCTCGGATTACCGCGTTGATTGCTCGCCATGATCGCCTCAAGCGTCTGAT GGTGCGCTTACTGTCTTGCG
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Glycosyl Transferase Family Protein; Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Glycosyltransferase-Like Protein; Glycosyl Transferase Group 2 Family Protein; Sugar Transferase; A-Glycosyltransferase; Glycosyl Transferase Protein; Glycosyltransferase Group 1 Protein; Glycosyl Transferase Group 1 Family; Glycosyl Transferase Group 1 Protein; Methyltransferase And Glycosyltransferase; Glycosyltransferase Family 4 Protein; Polysaccharide Biosynthesis Protein; Family 2 Glycosyl Transferase
Number of amino acids: Translated: 443; Mature: 442
Protein sequence:
>443_residues MSVDSVSRKHDRIPFIRFLGVYLLFQWRRQCARLHRARIALYSRRFGQWIQLRAAVSADQSAPPSVAAVVPASATQTPTN TRCILLIDTVPPRPDRDSGSLRCHHLMHLMVCMGYNVVLHCQERMPSAAEIMALRAIGVTTTAVAGGFPSWLLTNPERYC AVVVCRYHLGLSWLPLLRTFVPDSLCILDTVDLHHLREQREAELRNLSGLRAAAAITRRHELHAISCADLVWVVSPVERD YLGRLLPQARVEVVPNMHDMVETIPPFVSRHGFLFVGGSRHPPNVDAVRWLLSEIFPRIRERLPDAQLHLVGAGLAEAIQ SQQMICPGVSFHGHVPQMAPLLHACRVSLAPLRFGAGVKGKISEALAYGLPVVTTPEGAEGMYLRSGMDALISRDAEDLA RQAVCAHEDLEVWQRLSDNGQQIIKQHFSLHSTRAALAAMLPH
Sequences:
>Translated_443_residues MSVDSVSRKHDRIPFIRFLGVYLLFQWRRQCARLHRARIALYSRRFGQWIQLRAAVSADQSAPPSVAAVVPASATQTPTN TRCILLIDTVPPRPDRDSGSLRCHHLMHLMVCMGYNVVLHCQERMPSAAEIMALRAIGVTTTAVAGGFPSWLLTNPERYC AVVVCRYHLGLSWLPLLRTFVPDSLCILDTVDLHHLREQREAELRNLSGLRAAAAITRRHELHAISCADLVWVVSPVERD YLGRLLPQARVEVVPNMHDMVETIPPFVSRHGFLFVGGSRHPPNVDAVRWLLSEIFPRIRERLPDAQLHLVGAGLAEAIQ SQQMICPGVSFHGHVPQMAPLLHACRVSLAPLRFGAGVKGKISEALAYGLPVVTTPEGAEGMYLRSGMDALISRDAEDLA RQAVCAHEDLEVWQRLSDNGQQIIKQHFSLHSTRAALAAMLPH >Mature_442_residues SVDSVSRKHDRIPFIRFLGVYLLFQWRRQCARLHRARIALYSRRFGQWIQLRAAVSADQSAPPSVAAVVPASATQTPTNT RCILLIDTVPPRPDRDSGSLRCHHLMHLMVCMGYNVVLHCQERMPSAAEIMALRAIGVTTTAVAGGFPSWLLTNPERYCA VVVCRYHLGLSWLPLLRTFVPDSLCILDTVDLHHLREQREAELRNLSGLRAAAAITRRHELHAISCADLVWVVSPVERDY LGRLLPQARVEVVPNMHDMVETIPPFVSRHGFLFVGGSRHPPNVDAVRWLLSEIFPRIRERLPDAQLHLVGAGLAEAIQS QQMICPGVSFHGHVPQMAPLLHACRVSLAPLRFGAGVKGKISEALAYGLPVVTTPEGAEGMYLRSGMDALISRDAEDLAR QAVCAHEDLEVWQRLSDNGQQIIKQHFSLHSTRAALAAMLPH
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49300; Mature: 49169
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVDSVSRKHDRIPFIRFLGVYLLFQWRRQCARLHRARIALYSRRFGQWIQLRAAVSADQ CCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SAPPSVAAVVPASATQTPTNTRCILLIDTVPPRPDRDSGSLRCHHLMHLMVCMGYNVVLH CCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCHHEEE CQERMPSAAEIMALRAIGVTTTAVAGGFPSWLLTNPERYCAVVVCRYHLGLSWLPLLRTF EHHHCCCHHHHHHHHHHCCHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHH VPDSLCILDTVDLHHLREQREAELRNLSGLRAAAAITRRHELHAISCADLVWVVSPVERD CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH YLGRLLPQARVEVVPNMHDMVETIPPFVSRHGFLFVGGSRHPPNVDAVRWLLSEIFPRIR HHHHHCCHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHH ERLPDAQLHLVGAGLAEAIQSQQMICPGVSFHGHVPQMAPLLHACRVSLAPLRFGAGVKG HHCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCH KISEALAYGLPVVTTPEGAEGMYLRSGMDALISRDAEDLARQAVCAHEDLEVWQRLSDNG HHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCH QQIIKQHFSLHSTRAALAAMLPH HHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SVDSVSRKHDRIPFIRFLGVYLLFQWRRQCARLHRARIALYSRRFGQWIQLRAAVSADQ CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SAPPSVAAVVPASATQTPTNTRCILLIDTVPPRPDRDSGSLRCHHLMHLMVCMGYNVVLH CCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCHHEEE CQERMPSAAEIMALRAIGVTTTAVAGGFPSWLLTNPERYCAVVVCRYHLGLSWLPLLRTF EHHHCCCHHHHHHHHHHCCHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHH VPDSLCILDTVDLHHLREQREAELRNLSGLRAAAAITRRHELHAISCADLVWVVSPVERD CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH YLGRLLPQARVEVVPNMHDMVETIPPFVSRHGFLFVGGSRHPPNVDAVRWLLSEIFPRIR HHHHHCCHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHH ERLPDAQLHLVGAGLAEAIQSQQMICPGVSFHGHVPQMAPLLHACRVSLAPLRFGAGVKG HHCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCH KISEALAYGLPVVTTPEGAEGMYLRSGMDALISRDAEDLARQAVCAHEDLEVWQRLSDNG HHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCH QQIIKQHFSLHSTRAALAAMLPH HHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA