Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682404
Identifier: 182682404
GI number: 182682404
Start: 2093862
End: 2094461
Strand: Reverse
Name: 182682404
Synonym: XfasM23_1890
Alternate gene names: NA
Gene position: 2094461-2093862 (Counterclockwise)
Preceding gene: 182682405
Following gene: 182682395
Centisome position: 82.6
GC content: 62.17
Gene sequence:
>600_bases ATGCACGGTATTCTGCCGGGCAGCACCAGCACCAGCACCAGCACCAGCACCAGCACCAGCACCAGCACCAGCACCAGCAC CAGCACCAGCACCAGCACCAGCACCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCC AAAGCCAAAGCCAAAGCCAAAGCCAAAGCAGCATGAGCGCCCGCACCGCCCGCAGCACCCAATTACGCGCCGGTGGTGAC ATCGCCATCATGGTCTTTGGTGTTTACGAACTGGATGAAAAAGGCAAGCCCACACTAAAAACAGGCACCGGCAACATCAA TGCCACCGCCGCCCAGTTCAGCAGCCACAATCTGAACCTCACCGCCGCTGGTAACCTAAACGCCCACAGCGCCCAGAGCA CCCAAGAACAAACCTCCAGCCAGCGCCACCGCAGCGCCAGCTTGGGTGCCAAGATCGGGGTGACCGGCGGCGGCCCCAGC GTCAGTGCCGATGTGGCCCGTGGCCGTGGCAGTGCGTGCCGTGATTCCGCTGAGGGGCAGTGTTACTTGAGGGGCGCTGA AGTAGGCAATCAAACACCGCAAGGTTGTCGGTTATCGTGA
Upstream 100 bases:
>100_bases ACTGATGGACGGCATCCTGCAATCGGTGGTGATCCAGAAGCAGTGACTGCCCCATGTTCTCCATATCAGAGGCTGTGACT CGCCAGCGCTGTACGGCACG
Downstream 100 bases:
>100_bases GTTGGGAGGGGTGGAAATCGTTTGCAGCAATAGTATGAAGCAACGGGCGGCTGATGGTCAGATATCTGAAGCGCTGCCCG AGGTGTCGGGCAGCGATAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Hemagglutinin-Like Secreted Protein
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MHGILPGSTSTSTSTSTSTSTSTSTSTSTSTSTSTSSSSSSSSSSSSSSSSSSQSQSQSQSQSSMSARTARSTQLRAGGD IAIMVFGVYELDEKGKPTLKTGTGNINATAAQFSSHNLNLTAAGNLNAHSAQSTQEQTSSQRHRSASLGAKIGVTGGGPS VSADVARGRGSACRDSAEGQCYLRGAEVGNQTPQGCRLS
Sequences:
>Translated_199_residues MHGILPGSTSTSTSTSTSTSTSTSTSTSTSTSTSTSSSSSSSSSSSSSSSSSSQSQSQSQSQSSMSARTARSTQLRAGGD IAIMVFGVYELDEKGKPTLKTGTGNINATAAQFSSHNLNLTAAGNLNAHSAQSTQEQTSSQRHRSASLGAKIGVTGGGPS VSADVARGRGSACRDSAEGQCYLRGAEVGNQTPQGCRLS >Mature_199_residues MHGILPGSTSTSTSTSTSTSTSTSTSTSTSTSTSTSSSSSSSSSSSSSSSSSSQSQSQSQSQSSMSARTARSTQLRAGGD IAIMVFGVYELDEKGKPTLKTGTGNINATAAQFSSHNLNLTAAGNLNAHSAQSTQEQTSSQRHRSASLGAKIGVTGGGPS VSADVARGRGSACRDSAEGQCYLRGAEVGNQTPQGCRLS
Specific function: Unknown
COG id: COG3210
COG function: function code U; Large exoproteins involved in heme utilization or adhesion
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19907; Mature: 19907
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHGILPGSTSTSTSTSTSTSTSTSTSTSTSTSTSTSSSSSSSSSSSSSSSSSSQSQSQSQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH SQSSMSARTARSTQLRAGGDIAIMVFGVYELDEKGKPTLKTGTGNINATAAQFSSHNLNL HHHHHHHHHHHCCEECCCCCEEEEEEEEEEECCCCCCEEEECCCCCEEEEEECCCCCEEE TAAGNLNAHSAQSTQEQTSSQRHRSASLGAKIGVTGGGPSVSADVARGRGSACRDSAEGQ EECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHCCCCCCCCCCCCCE CYLRGAEVGNQTPQGCRLS EEEEECCCCCCCCCCCCCC >Mature Secondary Structure MHGILPGSTSTSTSTSTSTSTSTSTSTSTSTSTSTSSSSSSSSSSSSSSSSSSQSQSQSQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH SQSSMSARTARSTQLRAGGDIAIMVFGVYELDEKGKPTLKTGTGNINATAAQFSSHNLNL HHHHHHHHHHHCCEECCCCCEEEEEEEEEEECCCCCCEEEECCCCCEEEEEECCCCCEEE TAAGNLNAHSAQSTQEQTSSQRHRSASLGAKIGVTGGGPSVSADVARGRGSACRDSAEGQ EECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHCCCCCCCCCCCCCE CYLRGAEVGNQTPQGCRLS EEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA