Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is corA [H]
Identifier: 182682402
GI number: 182682402
Start: 2091868
End: 2092881
Strand: Direct
Name: corA [H]
Synonym: XfasM23_1888
Alternate gene names: 182682402
Gene position: 2091868-2092881 (Clockwise)
Preceding gene: 182682401
Following gene: 182682403
Centisome position: 82.5
GC content: 55.92
Gene sequence:
>1014_bases ATGACCACACCCCAGCCCCCACAACACCCCTCTCCTGAAAACCCAGCCTGTGTCATCACCTGCGCCTACTACGACCCACA AAACCAGCGCCATGACATCCACCTAGACCGCATCAGCGAAGAACTACAGTGCGACAACAGCTTCATCTGGGTCGGACTCT ACGAACCAGACGCAACCGTATTACGCAAACTCCAACAAGAATTCGGCCTCCACGACCTCGCCATCGAAGATGCCTTAAAA GCACACCAACGCCCTAAAGTAGAAAACTACGACAACACCTTATTTATCGTCGTCAACACCGCACAACTGATTGGCGAACG GATCTGCTACGGCGAAACCCACGCCTTCCTCAGCACCCGCTTCCTCATCATCGTGCGCCACGGCGCCTCACTCTCCTACG CACCAGTACGCACACGGATAGAACGCGACCCAACCATGCTTGGACGCGGCCCCGCATTCTGCCTCTACGGCGTCCTTGAC TTCATCGTCGACAACTACCTACCGATCATGAACGAATGCCGGGACACACTCGAACAACTTGAACAAGACATTTTTTCCGA AAACTACCAACGCCAAACCGTCATCCGCCTCTACGAACTCAAACGCGAACTCAACAAAATGCGTCTTATCGTTGCCCCCC TCCAAGACGTCCTCGCACACCTCACACGCAACCCCGAAACACTCCTGCCCCAAGACATCGGCATCTACATCCGCGACGTC CTCGACCATGCCATCCGCATTAACGACTCCATCGACACACTACGCGAAATGCTGAGCACCGCACTCAGCGTCAACCTCTC AATGGTGACCCTCGCCCAAGGCGAAACCGTCAAACGCCTAGGCGCCTGGGCCGCCCTGCTTGCCGCACCAACCCTCATCA CCAGCTGGTACGGCATGAACTTCACCAACATGCCCGAACTCCACATACCCTACGCCTACCCACTCCTTGCCGCCGGCGTC ACCCTATTGTGCATCCTGCTCTACAGACTCTTTAAACGCGTCCATTGGCTCTGA
Upstream 100 bases:
>100_bases CCCAACACAACCTCCCATGGATCGGCCTGCTCCTTCCAAACCACCTCACCCTGGCCTGGACACTGCACCGCCGCCTCACC ACAGCAACACATCACCCAAA
Downstream 100 bases:
>100_bases AACAAACCACAGAAAAAACACCTTAGCCATCCCACCATCCATCAACATCACCCCAAACCGATGAATGGCTAACGCAACAA CTGAAATTAATACTGACGCC
Product: Mg2 transporter protein CorA family protein
Products: Ni2; [Cytoplasm]; Co; 2 [Cytoplasm]; Mg (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MTTPQPPQHPSPENPACVITCAYYDPQNQRHDIHLDRISEELQCDNSFIWVGLYEPDATVLRKLQQEFGLHDLAIEDALK AHQRPKVENYDNTLFIVVNTAQLIGERICYGETHAFLSTRFLIIVRHGASLSYAPVRTRIERDPTMLGRGPAFCLYGVLD FIVDNYLPIMNECRDTLEQLEQDIFSENYQRQTVIRLYELKRELNKMRLIVAPLQDVLAHLTRNPETLLPQDIGIYIRDV LDHAIRINDSIDTLREMLSTALSVNLSMVTLAQGETVKRLGAWAALLAAPTLITSWYGMNFTNMPELHIPYAYPLLAAGV TLLCILLYRLFKRVHWL
Sequences:
>Translated_337_residues MTTPQPPQHPSPENPACVITCAYYDPQNQRHDIHLDRISEELQCDNSFIWVGLYEPDATVLRKLQQEFGLHDLAIEDALK AHQRPKVENYDNTLFIVVNTAQLIGERICYGETHAFLSTRFLIIVRHGASLSYAPVRTRIERDPTMLGRGPAFCLYGVLD FIVDNYLPIMNECRDTLEQLEQDIFSENYQRQTVIRLYELKRELNKMRLIVAPLQDVLAHLTRNPETLLPQDIGIYIRDV LDHAIRINDSIDTLREMLSTALSVNLSMVTLAQGETVKRLGAWAALLAAPTLITSWYGMNFTNMPELHIPYAYPLLAAGV TLLCILLYRLFKRVHWL >Mature_336_residues TTPQPPQHPSPENPACVITCAYYDPQNQRHDIHLDRISEELQCDNSFIWVGLYEPDATVLRKLQQEFGLHDLAIEDALKA HQRPKVENYDNTLFIVVNTAQLIGERICYGETHAFLSTRFLIIVRHGASLSYAPVRTRIERDPTMLGRGPAFCLYGVLDF IVDNYLPIMNECRDTLEQLEQDIFSENYQRQTVIRLYELKRELNKMRLIVAPLQDVLAHLTRNPETLLPQDIGIYIRDVL DHAIRINDSIDTLREMLSTALSVNLSMVTLAQGETVKRLGAWAALLAAPTLITSWYGMNFTNMPELHIPYAYPLLAAGVT LLCILLYRLFKRVHWL
Specific function: Mediates influx of magnesium ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004488 - InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 38673; Mature: 38542
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPQPPQHPSPENPACVITCAYYDPQNQRHDIHLDRISEELQCDNSFIWVGLYEPDATV CCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEHHHHHHHHCCCCCEEEEEEECCCHHH LRKLQQEFGLHDLAIEDALKAHQRPKVENYDNTLFIVVNTAQLIGERICYGETHAFLSTR HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECHHHHHHHHHCCCHHHHHHHE FLIIVRHGASLSYAPVRTRIERDPTMLGRGPAFCLYGVLDFIVDNYLPIMNECRDTLEQL EEEEEECCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH EQDIFSENYQRQTVIRLYELKRELNKMRLIVAPLQDVLAHLTRNPETLLPQDIGIYIRDV HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH LDHAIRINDSIDTLREMLSTALSVNLSMVTLAQGETVKRLGAWAALLAAPTLITSWYGMN HHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCC FTNMPELHIPYAYPLLAAGVTLLCILLYRLFKRVHWL CCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTPQPPQHPSPENPACVITCAYYDPQNQRHDIHLDRISEELQCDNSFIWVGLYEPDATV CCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEHHHHHHHHCCCCCEEEEEEECCCHHH LRKLQQEFGLHDLAIEDALKAHQRPKVENYDNTLFIVVNTAQLIGERICYGETHAFLSTR HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECHHHHHHHHHCCCHHHHHHHE FLIIVRHGASLSYAPVRTRIERDPTMLGRGPAFCLYGVLDFIVDNYLPIMNECRDTLEQL EEEEEECCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH EQDIFSENYQRQTVIRLYELKRELNKMRLIVAPLQDVLAHLTRNPETLLPQDIGIYIRDV HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH LDHAIRINDSIDTLREMLSTALSVNLSMVTLAQGETVKRLGAWAALLAAPTLITSWYGMN HHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCC FTNMPELHIPYAYPLLAAGVTLLCILLYRLFKRVHWL CCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Ni2; [Periplasm]; Co; 2 [Periplasm]; Mg (II) [Periplasm] [C]
Specific reaction: Ni2+ [Periplasm] = Ni2+ [Cytoplasm] Co+2 [Periplasm] = Co+2 [Cytoplasm] Mg (II) [Periplasm] = Mg (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]