Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is feoB [H]
Identifier: 182682374
GI number: 182682374
Start: 2062488
End: 2064341
Strand: Reverse
Name: feoB [H]
Synonym: XfasM23_1860
Alternate gene names: 182682374
Gene position: 2064341-2062488 (Counterclockwise)
Preceding gene: 182682375
Following gene: 182682373
Centisome position: 81.41
GC content: 53.02
Gene sequence:
>1854_bases ATGAGTAAGCATGTGCTCCGGTTGGCTTTGGTGGGTAATCCCAATAGTGGTAAGACGGCGTTGTTTAATCGGTTGACGGG TAGCCGACAGAAAGTGGCTAATTATCCTGGCGTCACCGTTGAGCGTAAGGAGGGGTATTTCCGCGCATCGTCTGGACGTG AGTTCGTGATCCTTGATCTGCCGGGTGCTTATAGTTTTCAGCCTGCTAGTTTTGACGAGGCGATTACCCGTGATTTTTGC CGTGGTTTCTATCCTGGTGAGGCGCCGCCGGATGTGTTGGTTTGTGTGGTTGATGCAACCAATCTGCGGTTGCATTTGCG TTTTGTACTGGAATTGATTGAATTAGGGCGGCCAGTCGTGGTGGCGCTGAACATGGTGGATGCTGCACAGCGGCGTGGTA TCCGTATTGATCGCGTGATTCTGGAGCAGTTGTTGGGAGTACCAGTGGTGGAAACGGTCGCGGTCCGCCGCCATGGTGCA CGTGCGCTGCTTGAGCAACTCGACACGGGGGTGATTCCATTGCCTGCACCTGTACCCGCGTTAGCCGCTGGTGACCAGTA TCACGCGCAAGTGCGTCATATTTTGGATGCGGCTGTCAAAATGCCCAGTCGCACGTCGCGTGTGGATGACGCATTGGACC GCTGGTTGTTGCATCCGGTGTTTGGTTTAGTGGTGCTGACTGTTGTGATGTTCTTGATTTTTCAGGCGGTATACGCATGG GCTGCGCCGCTGGTGAGTTTGATTGAGGGAAGTACCACGGTGTTGGGTCATTGGGTTGGGAATAGATTGCCGGATGGTCC GCTACGTAGTTTAGTGGTGGACGGCATTATTACCGGTATCGGCGGAGTTCTGATGTTTTTGCCGCAGATCTTGATCTTGT TTGCTTTCATCCTGGCGCTTGAGGAGTCTGGTTATTTGCCACGTGCGGCGTTTTTGCTGGATCGACTGATGGTGCTGGCT GGGTTGTCTGGGCGTTCGTTCATTCCTCTGTTGTCTAGTTTTGCTTGTGCAGTGCCGGGCATTATGTCAACGCGCAGTAT TCAGGACCCGCGTGATCGACTTGTCACCATCCTTGTCGCACCGTTGATGACCTGTTCGGCGCGGTTGCCGGTGTATACGT TGCTCATTGGTGCGTTCGTGCCGCGTAAATCTTTGTGGGGGCCGATCAATCAACAGGGGTTGGTGCTATTTGGGTTGTAT ATGGCGGGAATTTTCAGTGCGCTTGTCGTGTCCTGGACGGTAAAAAAGTGGCGCCGCGGTACAAGTGAGCATCCATTATT ATTGGAGCTGCCTTCTTACCGATTACCTCACTCACGTGATTTGCTGCTGGGTTTGTGGGAGCGTGCGGTGATTTTTCTTA AGCGTGTCGGTGGCATTATCTTGGCATTGACTATTTTGCTGTGGTTCTTGCTGGCGTTTCCGGAGCCACCGTCCGGCGCG ATTGGCCCAGCGATCCAATACAGCTTTGCTGGAAGAATTGGCCATGTGATTGCGGTATTTTTTGCCCCCTTAGGTTTTAG CTGGCAAATTTGTATTGCGTTGATCCCCGGGTTGGCTGCCCGCGAGGTCGCGGTTTCTTCACTGGCAACGGTGTATGCCT TGTCAGCGTCTAATGAAGAGATGGCTGTACGGGCATTGTCGCCGCTGATTCAAGACGGCTGGTCATTAGCGACTGCGCTG TCGCTCCTTGTCTGGTACATCTATGCACCGATGTGTATTTCCACTCTGGTGACGATTAAGCGAGAGACTAATTCTTGGAA GCACATGGCTATGACGGCCGGTTATCTGTTTGCTCTTGCTTACTTGGCGGCGTTGGCAACCTACCAGGTCGCATTGTTAC TGGGGGCAGGTTAA
Upstream 100 bases:
>100_bases TTAGGGCGTGAGCCGCTCTTGGTACAGGTCGGCTACACTCGTTTTGCTTTGCGCAGGGTTGAGGCGCAGCGCATCCGAGT GGTGCCGATGGAGACGGTCA
Downstream 100 bases:
>100_bases CCCATGAGCGTCTCTTTGTTGTTGCAGTATGTGGTGATTGCGCTGGCGGTGCTGGTCAGCGTCTTTGTGGTGGTCCGTAA GTATCTGCCCGGGACCTGGG
Product: ferrous iron transport protein B
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 617; Mature: 616
Protein sequence:
>617_residues MSKHVLRLALVGNPNSGKTALFNRLTGSRQKVANYPGVTVERKEGYFRASSGREFVILDLPGAYSFQPASFDEAITRDFC RGFYPGEAPPDVLVCVVDATNLRLHLRFVLELIELGRPVVVALNMVDAAQRRGIRIDRVILEQLLGVPVVETVAVRRHGA RALLEQLDTGVIPLPAPVPALAAGDQYHAQVRHILDAAVKMPSRTSRVDDALDRWLLHPVFGLVVLTVVMFLIFQAVYAW AAPLVSLIEGSTTVLGHWVGNRLPDGPLRSLVVDGIITGIGGVLMFLPQILILFAFILALEESGYLPRAAFLLDRLMVLA GLSGRSFIPLLSSFACAVPGIMSTRSIQDPRDRLVTILVAPLMTCSARLPVYTLLIGAFVPRKSLWGPINQQGLVLFGLY MAGIFSALVVSWTVKKWRRGTSEHPLLLELPSYRLPHSRDLLLGLWERAVIFLKRVGGIILALTILLWFLLAFPEPPSGA IGPAIQYSFAGRIGHVIAVFFAPLGFSWQICIALIPGLAAREVAVSSLATVYALSASNEEMAVRALSPLIQDGWSLATAL SLLVWYIYAPMCISTLVTIKRETNSWKHMAMTAGYLFALAYLAALATYQVALLLGAG
Sequences:
>Translated_617_residues MSKHVLRLALVGNPNSGKTALFNRLTGSRQKVANYPGVTVERKEGYFRASSGREFVILDLPGAYSFQPASFDEAITRDFC RGFYPGEAPPDVLVCVVDATNLRLHLRFVLELIELGRPVVVALNMVDAAQRRGIRIDRVILEQLLGVPVVETVAVRRHGA RALLEQLDTGVIPLPAPVPALAAGDQYHAQVRHILDAAVKMPSRTSRVDDALDRWLLHPVFGLVVLTVVMFLIFQAVYAW AAPLVSLIEGSTTVLGHWVGNRLPDGPLRSLVVDGIITGIGGVLMFLPQILILFAFILALEESGYLPRAAFLLDRLMVLA GLSGRSFIPLLSSFACAVPGIMSTRSIQDPRDRLVTILVAPLMTCSARLPVYTLLIGAFVPRKSLWGPINQQGLVLFGLY MAGIFSALVVSWTVKKWRRGTSEHPLLLELPSYRLPHSRDLLLGLWERAVIFLKRVGGIILALTILLWFLLAFPEPPSGA IGPAIQYSFAGRIGHVIAVFFAPLGFSWQICIALIPGLAAREVAVSSLATVYALSASNEEMAVRALSPLIQDGWSLATAL SLLVWYIYAPMCISTLVTIKRETNSWKHMAMTAGYLFALAYLAALATYQVALLLGAG >Mature_616_residues SKHVLRLALVGNPNSGKTALFNRLTGSRQKVANYPGVTVERKEGYFRASSGREFVILDLPGAYSFQPASFDEAITRDFCR GFYPGEAPPDVLVCVVDATNLRLHLRFVLELIELGRPVVVALNMVDAAQRRGIRIDRVILEQLLGVPVVETVAVRRHGAR ALLEQLDTGVIPLPAPVPALAAGDQYHAQVRHILDAAVKMPSRTSRVDDALDRWLLHPVFGLVVLTVVMFLIFQAVYAWA APLVSLIEGSTTVLGHWVGNRLPDGPLRSLVVDGIITGIGGVLMFLPQILILFAFILALEESGYLPRAAFLLDRLMVLAG LSGRSFIPLLSSFACAVPGIMSTRSIQDPRDRLVTILVAPLMTCSARLPVYTLLIGAFVPRKSLWGPINQQGLVLFGLYM AGIFSALVVSWTVKKWRRGTSEHPLLLELPSYRLPHSRDLLLGLWERAVIFLKRVGGIILALTILLWFLLAFPEPPSGAI GPAIQYSFAGRIGHVIAVFFAPLGFSWQICIALIPGLAAREVAVSSLATVYALSASNEEMAVRALSPLIQDGWSLATALS LLVWYIYAPMCISTLVTIKRETNSWKHMAMTAGYLFALAYLAALATYQVALLLGAG
Specific function: Fe(2+) uptake system, probably driven by GTP [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the feoB (TC 9.A.8) family [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=731, Percent_Identity=32.5581395348837, Blast_Score=291, Evalue=1e-79,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003373 - InterPro: IPR011640 - InterPro: IPR011619 - InterPro: IPR011642 - InterPro: IPR005225 [H]
Pfam domain/function: PF07664 FeoB_C; PF02421 FeoB_N; PF07670 Gate [H]
EC number: NA
Molecular weight: Translated: 67311; Mature: 67179
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKHVLRLALVGNPNSGKTALFNRLTGSRQKVANYPGVTVERKEGYFRASSGREFVILDL CCCCEEEEEEECCCCCCHHHHHHHHCCCHHHHCCCCCCEEECCCCCEEECCCCEEEEEEC PGAYSFQPASFDEAITRDFCRGFYPGEAPPDVLVCVVDATNLRLHLRFVLELIELGRPVV CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEE VALNMVDAAQRRGIRIDRVILEQLLGVPVVETVAVRRHGARALLEQLDTGVIPLPAPVPA EEEHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC LAAGDQYHAQVRHILDAAVKMPSRTSRVDDALDRWLLHPVFGLVVLTVVMFLIFQAVYAW HHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAPLVSLIEGSTTVLGHWVGNRLPDGPLRSLVVDGIITGIGGVLMFLPQILILFAFILAL HHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EESGYLPRAAFLLDRLMVLAGLSGRSFIPLLSSFACAVPGIMSTRSIQDPRDRLVTILVA HCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHH PLMTCSARLPVYTLLIGAFVPRKSLWGPINQQGLVLFGLYMAGIFSALVVSWTVKKWRRG HHHHHCCCCHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC TSEHPLLLELPSYRLPHSRDLLLGLWERAVIFLKRVGGIILALTILLWFLLAFPEPPSGA CCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC IGPAIQYSFAGRIGHVIAVFFAPLGFSWQICIALIPGLAAREVAVSSLATVYALSASNEE CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHH MAVRALSPLIQDGWSLATALSLLVWYIYAPMCISTLVTIKRETNSWKHMAMTAGYLFALA HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH YLAALATYQVALLLGAG HHHHHHHHHHHHHCCCC >Mature Secondary Structure SKHVLRLALVGNPNSGKTALFNRLTGSRQKVANYPGVTVERKEGYFRASSGREFVILDL CCCEEEEEEECCCCCCHHHHHHHHCCCHHHHCCCCCCEEECCCCCEEECCCCEEEEEEC PGAYSFQPASFDEAITRDFCRGFYPGEAPPDVLVCVVDATNLRLHLRFVLELIELGRPVV CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEE VALNMVDAAQRRGIRIDRVILEQLLGVPVVETVAVRRHGARALLEQLDTGVIPLPAPVPA EEEHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC LAAGDQYHAQVRHILDAAVKMPSRTSRVDDALDRWLLHPVFGLVVLTVVMFLIFQAVYAW HHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAPLVSLIEGSTTVLGHWVGNRLPDGPLRSLVVDGIITGIGGVLMFLPQILILFAFILAL HHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EESGYLPRAAFLLDRLMVLAGLSGRSFIPLLSSFACAVPGIMSTRSIQDPRDRLVTILVA HCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHH PLMTCSARLPVYTLLIGAFVPRKSLWGPINQQGLVLFGLYMAGIFSALVVSWTVKKWRRG HHHHHCCCCHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC TSEHPLLLELPSYRLPHSRDLLLGLWERAVIFLKRVGGIILALTILLWFLLAFPEPPSGA CCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC IGPAIQYSFAGRIGHVIAVFFAPLGFSWQICIALIPGLAAREVAVSSLATVYALSASNEE CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHH MAVRALSPLIQDGWSLATALSLLVWYIYAPMCISTLVTIKRETNSWKHMAMTAGYLFALA HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH YLAALATYQVALLLGAG HHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA