Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682335
Identifier: 182682335
GI number: 182682335
Start: 2025538
End: 2025939
Strand: Direct
Name: 182682335
Synonym: XfasM23_1818
Alternate gene names: NA
Gene position: 2025538-2025939 (Clockwise)
Preceding gene: 182682334
Following gene: 182682336
Centisome position: 79.88
GC content: 51.24
Gene sequence:
>402_bases ATGACTGGCATTGGCTACAGCAGTTATAGCGACCCACGCCTACAACCACCGCAAGACGATGCTAAAGAGTATTTCGCAGA ACGGGTTAATGCTCGCGTTCAAGACTATTTAAGCGACCCAGAAAGAATCGAAGAAGCCGATGAATGGGTGGACGGTACGT TATCGGAGGCCCATTACAAAGAGATGGAAATCGTTTTAGCGGATTTACATGCCCTGCCTTCGGATCAGTTAAGCGACAGC GATGTATTAGCCCGTCTTTACGCACTGGCCGAAGTGCAAGGACTCGCACGCCTGGAACAACTGCGCATCCTTGCTGAGCA GGACGTCAAGGAAGAAATGCGCCACGAATCAGAATGCTTTCACGCGATGTGGGGCGATGCCATGCAGGAGGAATACGCAT GA
Upstream 100 bases:
>100_bases GCAATAAAAGAATAGAAGACCGCCGTATATGGCTTCACGTCCGTGCTGTCCGTGGCCAGATGCGTACTGATGCCACTGCT ACACCAAAGGCAGGTGAGTC
Downstream 100 bases:
>100_bases TTCCTTGCGCCATCACCGCACGCACCAAGCAGGGTGTGTACACCTACACCGGCCTGTTTCAGAAAACTGTTGAGGCGAAG TCTGACGCCTACCGGCGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MTGIGYSSYSDPRLQPPQDDAKEYFAERVNARVQDYLSDPERIEEADEWVDGTLSEAHYKEMEIVLADLHALPSDQLSDS DVLARLYALAEVQGLARLEQLRILAEQDVKEEMRHESECFHAMWGDAMQEEYA
Sequences:
>Translated_133_residues MTGIGYSSYSDPRLQPPQDDAKEYFAERVNARVQDYLSDPERIEEADEWVDGTLSEAHYKEMEIVLADLHALPSDQLSDS DVLARLYALAEVQGLARLEQLRILAEQDVKEEMRHESECFHAMWGDAMQEEYA >Mature_132_residues TGIGYSSYSDPRLQPPQDDAKEYFAERVNARVQDYLSDPERIEEADEWVDGTLSEAHYKEMEIVLADLHALPSDQLSDSD VLARLYALAEVQGLARLEQLRILAEQDVKEEMRHESECFHAMWGDAMQEEYA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15282; Mature: 15151
Theoretical pI: Translated: 4.00; Mature: 4.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGIGYSSYSDPRLQPPQDDAKEYFAERVNARVQDYLSDPERIEEADEWVDGTLSEAHYK CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHH EMEIVLADLHALPSDQLSDSDVLARLYALAEVQGLARLEQLRILAEQDVKEEMRHESECF HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HAMWGDAMQEEYA HHHHHHHHHHCCC >Mature Secondary Structure TGIGYSSYSDPRLQPPQDDAKEYFAERVNARVQDYLSDPERIEEADEWVDGTLSEAHYK CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHH EMEIVLADLHALPSDQLSDSDVLARLYALAEVQGLARLEQLRILAEQDVKEEMRHESECF HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HAMWGDAMQEEYA HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA