Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is eptA [H]
Identifier: 182682300
GI number: 182682300
Start: 1978576
End: 1980234
Strand: Reverse
Name: eptA [H]
Synonym: XfasM23_1783
Alternate gene names: 182682300
Gene position: 1980234-1978576 (Counterclockwise)
Preceding gene: 182682301
Following gene: 182682297
Centisome position: 78.09
GC content: 49.25
Gene sequence:
>1659_bases ATGAGTTTTTCAACATTTGTTCTTGTGTTACGGCGTCGGATGAGTGAGTTTAACTGGCGTGTGCGCCCGGAAGTTTCTAC TGAGAGTGTAGTGCTCTGTACTAGCCTGTTCTTTGCACTTGCTTGCAATACGATGTTCTGGCGAAGTGCGATGAGTACCG TCTCAGGAAGTATCGGTTTTGTCCTTTCGCTTTTAGCGTTGTTGGTGACGGTACATGCGTTGCTGTTGGGTTTGGTGGTG TGGCGGTGGAGTGCAAAGCCATTGTTGACTTTGTTATTCGTGATTACGGCGTTTGCTACGCATTACATGAATAGCTACAG CGTCTACCTGGACGCGGACATGCTGCGTAATGTGTTCAATACCGATCATAAAGAGTCTCGGGAGCTGATAACTTCAGCGC TAATTTTGCCGTTGCTGTTCTATGCGGCGGTACCAATTGCGGTGTTGTGGCGGCTACGGTTTCGCCAGCGACCTTGGTCT CGTGCGCTTGGCCTACGCATGTTGTTTTTGCTGATAGTTATTGTGGTTGGTGCCAGTGGTGCGATGCTGTCATTCCAAAA ATTGTCGGCGTTGATACGTAATGATCGTGAGGTGCGTCATTTAGCCACGCCCATCAATTACATCATGGCGTTGCGCAAGA TGTTGAGCAATGATTCGGTTTTGAAGCGCGCTCCCAAGTTGCCGATTGGTGAAGATGCGGTGGCTACCCCACGTGTACCA AGTAGTCGTCCGCGTTTGTTAGTAATCGTAGTTGGTGAAACTGCCAGGGCACAGAATTGGGGGCTGAATGGCTACGTCCG TCAGACAACTCCGCAATTGGCTCAGAACGACGTTATCAATTTCCAAGATATGCACTCGTGTGGAACTAATACTGAAGTTT CGGTGCCATGCATGTTTTCACCGTATGGTCGTCGCAATTATGACGAACGTAAAATTCGTGGGCATCAGTCGCTATTACAT GTGCTTGAGCGTGCCCGAATCAGTACGTTGTGGCGCGATAACCAGTCTGGCTGTAAGGGGGTATGTGATGGATTGGAGTT GCAGCAGTTAGATGATGCTAAAGATCCCACGCTGTGCACTAGTAGTGGTCGCTGTATGGATGAAATTCTACTGAAGGATT TCGTGTCGCAGGTACGCAGTAAGTCGGGGGATCGGGTGGTGGTGCTTCATCAGCTTGGTAGCCACGGTCCCAGTTATTTC CAGCGTTATCCAGTTGCGTTCCGTCAATTTAATCCGACGTGTGAGACTCCTAACCTGGGGAGTTGCAGCCGTGAGCAGAT CGTTGCTGCTTACGATAATAGTTTGCTTTATACCGACCACTTTCTTGTCCGGACGATTGGGATGCTGCGTGATATGTCCG ACTACGACACAGCGATGATTTATTTATCCGATCACGGTGAATCTCTTGGTGAAAAGGGACTTTATTTGCATGGTATGCCA TACGCAATTGCGCCTGTTGAGCAGACACGGGTGCCGATGGTGATATGGTTCTCGAAGCAGTTCGTTCAGTCACGTCAGAT AGACTTGAACTGTGTGCACCAACGTGCCCGTCAGTATGCTGACCATGACAATCTATTCTCATCGGTGTTGGGGTTGATGC AGGTCAAGACAGCGCTATATGAGCGTCCACATGATCTGTTTGCCACATGCGAGAAATGA
Upstream 100 bases:
>100_bases GGTCACTGACCATCTGTTGGTTGGTTGCTTTGGGCTTTTTCTACCTCTTTTTTGTTTCTCCCGCAGTAAGGGTAGTCTCT GCGCAACAAAGGGCAATGAC
Downstream 100 bases:
>100_bases TGGGGATATTATGGTTGTTCATGTCTCATCGGACTAAATCTGAAGGAGTCATCACATCGTTTTACGGTGTCTGGTTTATG GACTAAAAATTTTATGATCT
Product: sulfatase
Products: NA
Alternate protein names: Polymyxin resistance protein pmrC [H]
Number of amino acids: Translated: 552; Mature: 551
Protein sequence:
>552_residues MSFSTFVLVLRRRMSEFNWRVRPEVSTESVVLCTSLFFALACNTMFWRSAMSTVSGSIGFVLSLLALLVTVHALLLGLVV WRWSAKPLLTLLFVITAFATHYMNSYSVYLDADMLRNVFNTDHKESRELITSALILPLLFYAAVPIAVLWRLRFRQRPWS RALGLRMLFLLIVIVVGASGAMLSFQKLSALIRNDREVRHLATPINYIMALRKMLSNDSVLKRAPKLPIGEDAVATPRVP SSRPRLLVIVVGETARAQNWGLNGYVRQTTPQLAQNDVINFQDMHSCGTNTEVSVPCMFSPYGRRNYDERKIRGHQSLLH VLERARISTLWRDNQSGCKGVCDGLELQQLDDAKDPTLCTSSGRCMDEILLKDFVSQVRSKSGDRVVVLHQLGSHGPSYF QRYPVAFRQFNPTCETPNLGSCSREQIVAAYDNSLLYTDHFLVRTIGMLRDMSDYDTAMIYLSDHGESLGEKGLYLHGMP YAIAPVEQTRVPMVIWFSKQFVQSRQIDLNCVHQRARQYADHDNLFSSVLGLMQVKTALYERPHDLFATCEK
Sequences:
>Translated_552_residues MSFSTFVLVLRRRMSEFNWRVRPEVSTESVVLCTSLFFALACNTMFWRSAMSTVSGSIGFVLSLLALLVTVHALLLGLVV WRWSAKPLLTLLFVITAFATHYMNSYSVYLDADMLRNVFNTDHKESRELITSALILPLLFYAAVPIAVLWRLRFRQRPWS RALGLRMLFLLIVIVVGASGAMLSFQKLSALIRNDREVRHLATPINYIMALRKMLSNDSVLKRAPKLPIGEDAVATPRVP SSRPRLLVIVVGETARAQNWGLNGYVRQTTPQLAQNDVINFQDMHSCGTNTEVSVPCMFSPYGRRNYDERKIRGHQSLLH VLERARISTLWRDNQSGCKGVCDGLELQQLDDAKDPTLCTSSGRCMDEILLKDFVSQVRSKSGDRVVVLHQLGSHGPSYF QRYPVAFRQFNPTCETPNLGSCSREQIVAAYDNSLLYTDHFLVRTIGMLRDMSDYDTAMIYLSDHGESLGEKGLYLHGMP YAIAPVEQTRVPMVIWFSKQFVQSRQIDLNCVHQRARQYADHDNLFSSVLGLMQVKTALYERPHDLFATCEK >Mature_551_residues SFSTFVLVLRRRMSEFNWRVRPEVSTESVVLCTSLFFALACNTMFWRSAMSTVSGSIGFVLSLLALLVTVHALLLGLVVW RWSAKPLLTLLFVITAFATHYMNSYSVYLDADMLRNVFNTDHKESRELITSALILPLLFYAAVPIAVLWRLRFRQRPWSR ALGLRMLFLLIVIVVGASGAMLSFQKLSALIRNDREVRHLATPINYIMALRKMLSNDSVLKRAPKLPIGEDAVATPRVPS SRPRLLVIVVGETARAQNWGLNGYVRQTTPQLAQNDVINFQDMHSCGTNTEVSVPCMFSPYGRRNYDERKIRGHQSLLHV LERARISTLWRDNQSGCKGVCDGLELQQLDDAKDPTLCTSSGRCMDEILLKDFVSQVRSKSGDRVVVLHQLGSHGPSYFQ RYPVAFRQFNPTCETPNLGSCSREQIVAAYDNSLLYTDHFLVRTIGMLRDMSDYDTAMIYLSDHGESLGEKGLYLHGMPY AIAPVEQTRVPMVIWFSKQFVQSRQIDLNCVHQRARQYADHDNLFSSVLGLMQVKTALYERPHDLFATCEK
Specific function: Catalyzes the addition of a phosphoethanolamine moiety to the lipid A. The phosphoethanolamine modification is required for resistance to polymyxin [H]
COG id: COG2194
COG function: function code R; Predicted membrane-associated, metal-dependent hydrolase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoethanolamine transferase family. EptA subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082372, Length=541, Percent_Identity=36.5988909426987, Blast_Score=370, Evalue=1e-103, Organism=Escherichia coli, GI87082286, Length=520, Percent_Identity=28.8461538461538, Blast_Score=172, Evalue=5e-44, Organism=Escherichia coli, GI1790392, Length=491, Percent_Identity=21.9959266802444, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI87082223, Length=256, Percent_Identity=28.515625, Blast_Score=81, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR012549 - InterPro: IPR000917 [H]
Pfam domain/function: PF08019 DUF1705; PF00884 Sulfatase [H]
EC number: NA
Molecular weight: Translated: 62680; Mature: 62548
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: PS01319 RBFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFSTFVLVLRRRMSEFNWRVRPEVSTESVVLCTSLFFALACNTMFWRSAMSTVSGSIGF CCHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH VLSLLALLVTVHALLLGLVVWRWSAKPLLTLLFVITAFATHYMNSYSVYLDADMLRNVFN HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHC TDHKESRELITSALILPLLFYAAVPIAVLWRLRFRQRPWSRALGLRMLFLLIVIVVGASG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC AMLSFQKLSALIRNDREVRHLATPINYIMALRKMLSNDSVLKRAPKLPIGEDAVATPRVP HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCC SSRPRLLVIVVGETARAQNWGLNGYVRQTTPQLAQNDVINFQDMHSCGTNTEVSVPCMFS CCCCCEEEEEECCCCCCCCCCCCCEEECCCHHHHHCCCCCHHHHHCCCCCCCEEECEEEC PYGRRNYDERKIRGHQSLLHVLERARISTLWRDNQSGCKGVCDGLELQQLDDAKDPTLCT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHCCCCCCCEEC SSGRCMDEILLKDFVSQVRSKSGDRVVVLHQLGSHGPSYFQRYPVAFRQFNPTCETPNLG CCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCCHHHHHCCCCCCCCCCC SCSREQIVAAYDNSLLYTDHFLVRTIGMLRDMSDYDTAMIYLSDHGESLGEKGLYLHGMP CCCHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEECCC YAIAPVEQTRVPMVIWFSKQFVQSRQIDLNCVHQRARQYADHDNLFSSVLGLMQVKTALY CEECCHHHCCCCEEEEECHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH ERPHDLFATCEK HCCCHHHHCCCC >Mature Secondary Structure SFSTFVLVLRRRMSEFNWRVRPEVSTESVVLCTSLFFALACNTMFWRSAMSTVSGSIGF CHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH VLSLLALLVTVHALLLGLVVWRWSAKPLLTLLFVITAFATHYMNSYSVYLDADMLRNVFN HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHC TDHKESRELITSALILPLLFYAAVPIAVLWRLRFRQRPWSRALGLRMLFLLIVIVVGASG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC AMLSFQKLSALIRNDREVRHLATPINYIMALRKMLSNDSVLKRAPKLPIGEDAVATPRVP HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCC SSRPRLLVIVVGETARAQNWGLNGYVRQTTPQLAQNDVINFQDMHSCGTNTEVSVPCMFS CCCCCEEEEEECCCCCCCCCCCCCEEECCCHHHHHCCCCCHHHHHCCCCCCCEEECEEEC PYGRRNYDERKIRGHQSLLHVLERARISTLWRDNQSGCKGVCDGLELQQLDDAKDPTLCT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHCCCCCCCEEC SSGRCMDEILLKDFVSQVRSKSGDRVVVLHQLGSHGPSYFQRYPVAFRQFNPTCETPNLG CCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCCHHHHHCCCCCCCCCCC SCSREQIVAAYDNSLLYTDHFLVRTIGMLRDMSDYDTAMIYLSDHGESLGEKGLYLHGMP CCCHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEECCC YAIAPVEQTRVPMVIWFSKQFVQSRQIDLNCVHQRARQYADHDNLFSSVLGLMQVKTALY CEECCHHHCCCCEEEEECHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH ERPHDLFATCEK HCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503; 8282725 [H]