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The map label for this gene is rmuC [H]

Identifier: 182682273

GI number: 182682273

Start: 1942351

End: 1943721

Strand: Reverse

Name: rmuC [H]

Synonym: XfasM23_1755

Alternate gene names: 182682273

Gene position: 1943721-1942351 (Counterclockwise)

Preceding gene: 182682274

Following gene: 182682272

Centisome position: 76.65

GC content: 54.05

Gene sequence:

>1371_bases
ATGCAACCTGATTTTCTGATTCTTGGATGTCTTCTTTGTATTGTCCTGGTTCTGCAGATTCTTGCTTTACTGCGGAGATC
CGACCATACCGCGCTCGATCATGTATTGCGGGAGGAACACCGTGTTGGCCGTGCCGAATTGCGTGAGCAGCTTGAGACCC
TGGAGCGGCAACAGGAAGTGCGTCTGGCAAGTTTTGCACGCTCCCTCACCGATCTGGTTGCTCGTATTGATCAACGTTTG
GATCAGCTGACTGCCTCACTGGGCGAAGACGCGCGGAAGGGACGTCAAGAAGCAAGTGAAGGGCAACAACGTTTCGCAGA
TGCCCTTGGACAGCGCCTGACGGAGCTGACACAGCGTAACGCCCAGTCCATCAATGAGATGCGTACCACTTTGGAGCAGC
AACTACATGTGCTGCGAGCCGACAATGCGCAACAGCTCGAGCAGATACGTACGATCGTTGATGAGAAGCTTCAAACGACC
CTGAATACCCGTCTGGATTCATCCTTTAAATTGGTTTCCGAGCGTCTAGAACAGGTACAGCGTGGTCTTGGCGAGATGCA
ACAATTGGCAACTGGCGTGGGTGATCTCAAGCGTGTCTTGACGCATGTGAAGAGCCGCGGTACTTGGGGGGAGGTCCAAC
TGGATAACATTCTCGACCAAACGCTCACTCAGGAGCAGTACGCGCGTGGTGTGCGTGTTTGCCCGGATGCCAGCGAAATT
GTCGATTTTGCAGTGCGCTTGCCTGGGCGTGGTCAATACGAAGCCCCTGTATGGTTGCCGATCGACGTGAAATGCCCGAA
GGAAGATTATGAACGTTTGCTTGATGCTCAGGAGCAAGCAGACCAAGAGTTGGTGCGTACGATGGGGGTGCAATTGGAGC
GTGCGATTAAAATCCAAGCCAAGTCGATTCGTGACAAGTACATCGTTCCACCGCATACCACGGATTTCGCCGTGATGTTC
CTGCCGACCGAGGGCCTGTATGCCGAAACGATCCGCCGTCCTGGTTTGGCCGATGTGTTACAGCGTGAGTATCGCGTTGT
GGTGGCGGGCCCGACCACGGTAACGGCGCTGCTCAATAGCTTGCAAATGGGGTTTCGTACATTGGCGATCGAGCAGCGTT
CCAGTGAGGTGTGGAGCTTACTGGGAGCGGTGAAAAGCGAGTTCGGAAAATTTGCCGGTATCCTTGAAAAAGCAGAAAAA
CAGATCAACACCGTCGGCAAGAGCCTCGGTGAGGCTGGCCGTAAAACCCGTACCATTGAGCGCCGCCTGAGAGGCGTGGA
GTCATTGTCACAAGAGCAGACGCAAGTGCTATTGGATGGCTTGGATGTGGATACAGCTGAAAGTGACGTCGACTCGGATG
CTTCGTTCTGA

Upstream 100 bases:

>100_bases
CTTCAAAGGATGGAAAAACTTGCCATTTCCTCTCTTCTGGATACGCTGCTGTGTCGTTTTATGGTGAAACGATCGGGAGA
CATCCCGTTACACTGCACAC

Downstream 100 bases:

>100_bases
ACTTGTGTTTCAGTGTGTGTAGTCATGCTGCGCTTGGCGAGCATCTTGCATGACGCTGTTATCCATGTGACATCGCATCC
GATCAGCGAATCTTGAAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 456; Mature: 456

Protein sequence:

>456_residues
MQPDFLILGCLLCIVLVLQILALLRRSDHTALDHVLREEHRVGRAELREQLETLERQQEVRLASFARSLTDLVARIDQRL
DQLTASLGEDARKGRQEASEGQQRFADALGQRLTELTQRNAQSINEMRTTLEQQLHVLRADNAQQLEQIRTIVDEKLQTT
LNTRLDSSFKLVSERLEQVQRGLGEMQQLATGVGDLKRVLTHVKSRGTWGEVQLDNILDQTLTQEQYARGVRVCPDASEI
VDFAVRLPGRGQYEAPVWLPIDVKCPKEDYERLLDAQEQADQELVRTMGVQLERAIKIQAKSIRDKYIVPPHTTDFAVMF
LPTEGLYAETIRRPGLADVLQREYRVVVAGPTTVTALLNSLQMGFRTLAIEQRSSEVWSLLGAVKSEFGKFAGILEKAEK
QINTVGKSLGEAGRKTRTIERRLRGVESLSQEQTQVLLDGLDVDTAESDVDSDASF

Sequences:

>Translated_456_residues
MQPDFLILGCLLCIVLVLQILALLRRSDHTALDHVLREEHRVGRAELREQLETLERQQEVRLASFARSLTDLVARIDQRL
DQLTASLGEDARKGRQEASEGQQRFADALGQRLTELTQRNAQSINEMRTTLEQQLHVLRADNAQQLEQIRTIVDEKLQTT
LNTRLDSSFKLVSERLEQVQRGLGEMQQLATGVGDLKRVLTHVKSRGTWGEVQLDNILDQTLTQEQYARGVRVCPDASEI
VDFAVRLPGRGQYEAPVWLPIDVKCPKEDYERLLDAQEQADQELVRTMGVQLERAIKIQAKSIRDKYIVPPHTTDFAVMF
LPTEGLYAETIRRPGLADVLQREYRVVVAGPTTVTALLNSLQMGFRTLAIEQRSSEVWSLLGAVKSEFGKFAGILEKAEK
QINTVGKSLGEAGRKTRTIERRLRGVESLSQEQTQVLLDGLDVDTAESDVDSDASF
>Mature_456_residues
MQPDFLILGCLLCIVLVLQILALLRRSDHTALDHVLREEHRVGRAELREQLETLERQQEVRLASFARSLTDLVARIDQRL
DQLTASLGEDARKGRQEASEGQQRFADALGQRLTELTQRNAQSINEMRTTLEQQLHVLRADNAQQLEQIRTIVDEKLQTT
LNTRLDSSFKLVSERLEQVQRGLGEMQQLATGVGDLKRVLTHVKSRGTWGEVQLDNILDQTLTQEQYARGVRVCPDASEI
VDFAVRLPGRGQYEAPVWLPIDVKCPKEDYERLLDAQEQADQELVRTMGVQLERAIKIQAKSIRDKYIVPPHTTDFAVMF
LPTEGLYAETIRRPGLADVLQREYRVVVAGPTTVTALLNSLQMGFRTLAIEQRSSEVWSLLGAVKSEFGKFAGILEKAEK
QINTVGKSLGEAGRKTRTIERRLRGVESLSQEQTQVLLDGLDVDTAESDVDSDASF

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 51416; Mature: 51416

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPDFLILGCLLCIVLVLQILALLRRSDHTALDHVLREEHRVGRAELREQLETLERQQEV
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
RLASFARSLTDLVARIDQRLDQLTASLGEDARKGRQEASEGQQRFADALGQRLTELTQRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQSINEMRTTLEQQLHVLRADNAQQLEQIRTIVDEKLQTTLNTRLDSSFKLVSERLEQVQ
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
RGLGEMQQLATGVGDLKRVLTHVKSRGTWGEVQLDNILDQTLTQEQYARGVRVCPDASEI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH
VDFAVRLPGRGQYEAPVWLPIDVKCPKEDYERLLDAQEQADQELVRTMGVQLERAIKIQA
HHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSIRDKYIVPPHTTDFAVMFLPTEGLYAETIRRPGLADVLQREYRVVVAGPTTVTALLNS
HHHCCCCCCCCCCCCEEEEEECCCCHHHHHHCCCCHHHHHHHHCEEEEECCHHHHHHHHH
LQMGFRTLAIEQRSSEVWSLLGAVKSEFGKFAGILEKAEKQINTVGKSLGEAGRKTRTIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRLRGVESLSQEQTQVLLDGLDVDTAESDVDSDASF
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQPDFLILGCLLCIVLVLQILALLRRSDHTALDHVLREEHRVGRAELREQLETLERQQEV
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
RLASFARSLTDLVARIDQRLDQLTASLGEDARKGRQEASEGQQRFADALGQRLTELTQRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQSINEMRTTLEQQLHVLRADNAQQLEQIRTIVDEKLQTTLNTRLDSSFKLVSERLEQVQ
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
RGLGEMQQLATGVGDLKRVLTHVKSRGTWGEVQLDNILDQTLTQEQYARGVRVCPDASEI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH
VDFAVRLPGRGQYEAPVWLPIDVKCPKEDYERLLDAQEQADQELVRTMGVQLERAIKIQA
HHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSIRDKYIVPPHTTDFAVMFLPTEGLYAETIRRPGLADVLQREYRVVVAGPTTVTALLNS
HHHCCCCCCCCCCCCEEEEEECCCCHHHHHHCCCCHHHHHHHHCEEEEECCHHHHHHHHH
LQMGFRTLAIEQRSSEVWSLLGAVKSEFGKFAGILEKAEKQINTVGKSLGEAGRKTRTIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRLRGVESLSQEQTQVLLDGLDVDTAESDVDSDASF
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]