Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is mlaE [H]
Identifier: 182682267
GI number: 182682267
Start: 1938217
End: 1938966
Strand: Direct
Name: mlaE [H]
Synonym: XfasM23_1749
Alternate gene names: 182682267
Gene position: 1938217-1938966 (Clockwise)
Preceding gene: 182682266
Following gene: 182682268
Centisome position: 76.44
GC content: 54.27
Gene sequence:
>750_bases ATGCCACTGGTATCTTCAATCAGCTCGCTAGGCCGCTCTGGTCTGTTTGCACTCACTGTATTACGCAGCTCGCTGCCCAC ACGCGACTTCTTCGCCGAACTGATCCGTGAAATCTACAAGATTGGCGCGCGCTCGCTACCAATCATCGCCGTCGGAGGCG CGTTCGTCGGCTTGGTACTGACCTTGCAAGGCTACCGCACACTCACTCTGTATGGCGCTTCCGACGCACTATCCACCCTC CTAGGCCTATCACTGTATCGCGAACTTGCGCCCGTGCTGACTGCTCTGCTTTTCATCGGACGTGCGGGCAGCTCAGTGGC GGCGGAACTGAGCCTGATGCGTGCGACCGATCAGATCAAGGCACTGGAGCTGATGGCCATCGACCCCATCGCTAAAGCAG TGGCGCCACGCTTTTGGGCAGCGGTATTGACTGTACCTTTACTCACAGGTGTGTTTTGCTCACTGGCCATCTGCAGTGGT TACTTCCAAGCAGTCCATGTGTTAGGCATAGACAACGGTTTATTCTGGTCAGGATTGAGCAACAGCGTGGACTTTTTGGA GGATTTCGGCGTAGCAATGCTCAAATCAGCAATCTTTGGTGGCACCTCGGCTCTTGTGGCAGCTTACGTAGGCTTCCATG CGCAACCAACCATTGAGGGCACTTCAATCGCAACCACGCGTGCAGTCGTCAACGCGTCATTGCTGGTATTGATGTTTAAC TTCGTGCTATCAGCACTATTATTCCGATAA
Upstream 100 bases:
>100_bases CCAGCAACGATGCGCTGGTATACCAGTTTATGCATGGGCAACCGGACGGGCCGATCCCATTCGATGCAGCACCACGCACA TCTGAACGGAGTTCCGCCTA
Downstream 100 bases:
>100_bases TCCGTGCTGCCTGCCCCGTCCTCCACATGAAAAAATCAGCGTTTTTCTACGCAAGATATTTAAAGAAATATGAAGTGAAA ACCTGCTCTGATCCATCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MPLVSSISSLGRSGLFALTVLRSSLPTRDFFAELIREIYKIGARSLPIIAVGGAFVGLVLTLQGYRTLTLYGASDALSTL LGLSLYRELAPVLTALLFIGRAGSSVAAELSLMRATDQIKALELMAIDPIAKAVAPRFWAAVLTVPLLTGVFCSLAICSG YFQAVHVLGIDNGLFWSGLSNSVDFLEDFGVAMLKSAIFGGTSALVAAYVGFHAQPTIEGTSIATTRAVVNASLLVLMFN FVLSALLFR
Sequences:
>Translated_249_residues MPLVSSISSLGRSGLFALTVLRSSLPTRDFFAELIREIYKIGARSLPIIAVGGAFVGLVLTLQGYRTLTLYGASDALSTL LGLSLYRELAPVLTALLFIGRAGSSVAAELSLMRATDQIKALELMAIDPIAKAVAPRFWAAVLTVPLLTGVFCSLAICSG YFQAVHVLGIDNGLFWSGLSNSVDFLEDFGVAMLKSAIFGGTSALVAAYVGFHAQPTIEGTSIATTRAVVNASLLVLMFN FVLSALLFR >Mature_248_residues PLVSSISSLGRSGLFALTVLRSSLPTRDFFAELIREIYKIGARSLPIIAVGGAFVGLVLTLQGYRTLTLYGASDALSTLL GLSLYRELAPVLTALLFIGRAGSSVAAELSLMRATDQIKALELMAIDPIAKAVAPRFWAAVLTVPLLTGVFCSLAICSGY FQAVHVLGIDNGLFWSGLSNSVDFLEDFGVAMLKSAIFGGTSALVAAYVGFHAQPTIEGTSIATTRAVVNASLLVLMFNF VLSALLFR
Specific function: Part of the ABC transporter complex mlaFEDB that actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner memb
COG id: COG0767
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaE permease family [H]
Homologues:
Organism=Escherichia coli, GI1789585, Length=245, Percent_Identity=44.8979591836735, Blast_Score=215, Evalue=2e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003453 [H]
Pfam domain/function: PF02405 DUF140 [H]
EC number: NA
Molecular weight: Translated: 26314; Mature: 26183
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLVSSISSLGRSGLFALTVLRSSLPTRDFFAELIREIYKIGARSLPIIAVGGAFVGLVL CCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHH TLQGYRTLTLYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSVAAELSLMRATDQIK HHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH ALELMAIDPIAKAVAPRFWAAVLTVPLLTGVFCSLAICSGYFQAVHVLGIDNGLFWSGLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCC NSVDFLEDFGVAMLKSAIFGGTSALVAAYVGFHAQPTIEGTSIATTRAVVNASLLVLMFN CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH FVLSALLFR HHHHHHHCC >Mature Secondary Structure PLVSSISSLGRSGLFALTVLRSSLPTRDFFAELIREIYKIGARSLPIIAVGGAFVGLVL CHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHH TLQGYRTLTLYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSVAAELSLMRATDQIK HHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH ALELMAIDPIAKAVAPRFWAAVLTVPLLTGVFCSLAICSGYFQAVHVLGIDNGLFWSGLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCC NSVDFLEDFGVAMLKSAIFGGTSALVAAYVGFHAQPTIEGTSIATTRAVVNASLLVLMFN CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH FVLSALLFR HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]