Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682243
Identifier: 182682243
GI number: 182682243
Start: 1906539
End: 1906889
Strand: Reverse
Name: 182682243
Synonym: XfasM23_1725
Alternate gene names: NA
Gene position: 1906889-1906539 (Counterclockwise)
Preceding gene: 182682244
Following gene: 182682240
Centisome position: 75.2
GC content: 44.44
Gene sequence:
>351_bases ATGTTGACTCCCTTCTCTGTTTATCTGTATCCAGTGTTATTGCTGATTGGTAGTAACGTTTTTATGACATTCGCTTGGTA TGGGCATCTCAAGTACAAGAGTGTTTCGTTGGTTACCGTGATTTTTGTGAGTTGGGGCATCGCCTTCTTTGAATACTGTC TTCAGGTGCCGGGTAACCGCCTTGGCAGTGTTGTTTATTCGGCCCCGCAACTGAAGGGTATGCAGGAGGTAATTACTCTT TTGATATTCGCTTGTTTCTCAACATTTTATTTGGGTCAGCCACTACGTTGGAATCACTGGGCAGCGTTTGGCCTTATTTT GATCGCGGTTCTATTGATGTTCAGGGAGTGA
Upstream 100 bases:
>100_bases GTCATGATGCTGTTCCAGAAATGTTGAACGTATGTTTTTGGGGATGTCCTTAGCTTTGCGTACTTTACTTTTACATCCAT CTTTGCATTTTTAATATGTT
Downstream 100 bases:
>100_bases GAGTGATGGGGTGATGTTGCGTGGCAGTTTATTGTTCTTGTATCTGTATAGAAAAGGATCAGATTTTGCGGCAAGAGTTG GATAATGCGTGTGTGAATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MLTPFSVYLYPVLLLIGSNVFMTFAWYGHLKYKSVSLVTVIFVSWGIAFFEYCLQVPGNRLGSVVYSAPQLKGMQEVITL LIFACFSTFYLGQPLRWNHWAAFGLILIAVLLMFRE
Sequences:
>Translated_116_residues MLTPFSVYLYPVLLLIGSNVFMTFAWYGHLKYKSVSLVTVIFVSWGIAFFEYCLQVPGNRLGSVVYSAPQLKGMQEVITL LIFACFSTFYLGQPLRWNHWAAFGLILIAVLLMFRE >Mature_116_residues MLTPFSVYLYPVLLLIGSNVFMTFAWYGHLKYKSVSLVTVIFVSWGIAFFEYCLQVPGNRLGSVVYSAPQLKGMQEVITL LIFACFSTFYLGQPLRWNHWAAFGLILIAVLLMFRE
Specific function: Unknown
COG id: COG3169
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13285; Mature: 13285
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTPFSVYLYPVLLLIGSNVFMTFAWYGHLKYKSVSLVTVIFVSWGIAFFEYCLQVPGNR CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH LGSVVYSAPQLKGMQEVITLLIFACFSTFYLGQPLRWNHWAAFGLILIAVLLMFRE HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLTPFSVYLYPVLLLIGSNVFMTFAWYGHLKYKSVSLVTVIFVSWGIAFFEYCLQVPGNR CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH LGSVVYSAPQLKGMQEVITLLIFACFSTFYLGQPLRWNHWAAFGLILIAVLLMFRE HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA