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The map label for this gene is ppdD [C]

Identifier: 182682220

GI number: 182682220

Start: 1876989

End: 1877444

Strand: Reverse

Name: ppdD [C]

Synonym: XfasM23_1702

Alternate gene names: 182682220

Gene position: 1877444-1876989 (Counterclockwise)

Preceding gene: 182682221

Following gene: 182682219

Centisome position: 74.04

GC content: 50.44

Gene sequence:

>456_bases
ATGATGGTGATCCTAAAGTGGGAACGTGTGAGCAAGCGCAGGCGGATTGGGGCACGGCAGCGGTCATACGGGTATCACTT
AATTGAGTTGATGGTTGTGGTCGCTGTCATTGCCATCTTGTCGTCCATTGCGTATCCGTCATACCAGCATTACATTCTCA
AGAGCCATCGGGATCAGGCTAAGGCTGATTTAGTGGAGATTGCCCAGTTCGCGGAGCGTTTTCGTACGGTGAACAATACT
TATGCCGGATTCCCCGCAACCAATCCTATAACCCAGTCCCCACGCCAAGGGACGGCATCTTATCTTTTGGTGTTTGTTGG
AGATGCCACGCGTACTGCGTTTACTGTCAGTGCGGTGCCACAAGGCACTCAGCAAAACGACAAGTGCGGTACCTTGTTTA
TCAACCAGGCTGGAATTAAGACGAATAGCCAAGGTGAATTATCCGAATGCTGGTAA

Upstream 100 bases:

>100_bases
TGGATACCCGATGCAGCGAAGTCATCATTGATCCAAATGATCCAACCAGGTCCATCTCACTGTTCAGGGCATGTGGACGG
CAATCGTGGAGGCAGTTGCG

Downstream 100 bases:

>100_bases
CGTGTTCCCGCATTGCTTTTAGTTGGAAGCATTTCAATGTTCCAGAAAATGCGTTGGGAATAATGTTGATTCAGTCATGA
GTGGCTGGGTACAATTGCAA

Product: type IV pilin

Products: NA

Alternate protein names: Fimbrial Protein Pilin; Type IV Pilin PilE; Type 4 Fimbrial Biogenesis Signal Peptide Protein; Type 4 Fimbrial Biogenesis Protein PilE; Prepilin Like Protein

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MMVILKWERVSKRRRIGARQRSYGYHLIELMVVVAVIAILSSIAYPSYQHYILKSHRDQAKADLVEIAQFAERFRTVNNT
YAGFPATNPITQSPRQGTASYLLVFVGDATRTAFTVSAVPQGTQQNDKCGTLFINQAGIKTNSQGELSECW

Sequences:

>Translated_151_residues
MMVILKWERVSKRRRIGARQRSYGYHLIELMVVVAVIAILSSIAYPSYQHYILKSHRDQAKADLVEIAQFAERFRTVNNT
YAGFPATNPITQSPRQGTASYLLVFVGDATRTAFTVSAVPQGTQQNDKCGTLFINQAGIKTNSQGELSECW
>Mature_151_residues
MMVILKWERVSKRRRIGARQRSYGYHLIELMVVVAVIAILSSIAYPSYQHYILKSHRDQAKADLVEIAQFAERFRTVNNT
YAGFPATNPITQSPRQGTASYLLVFVGDATRTAFTVSAVPQGTQQNDKCGTLFINQAGIKTNSQGELSECW

Specific function: Not Yet Known. [C]

COG id: COG4968

COG function: function code NU; Tfp pilus assembly protein PilE

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16945; Mature: 16945

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMVILKWERVSKRRRIGARQRSYGYHLIELMVVVAVIAILSSIAYPSYQHYILKSHRDQA
CEEEEEHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHH
KADLVEIAQFAERFRTVNNTYAGFPATNPITQSPRQGTASYLLVFVGDATRTAFTVSAVP
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCC
QGTQQNDKCGTLFINQAGIKTNSQGELSECW
CCCCCCCCCCEEEEECCCCCCCCCCCHHCCC
>Mature Secondary Structure
MMVILKWERVSKRRRIGARQRSYGYHLIELMVVVAVIAILSSIAYPSYQHYILKSHRDQA
CEEEEEHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHH
KADLVEIAQFAERFRTVNNTYAGFPATNPITQSPRQGTASYLLVFVGDATRTAFTVSAVP
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCC
QGTQQNDKCGTLFINQAGIKTNSQGELSECW
CCCCCCCCCCEEEEECCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA