Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682157
Identifier: 182682157
GI number: 182682157
Start: 1815296
End: 1815688
Strand: Reverse
Name: 182682157
Synonym: XfasM23_1636
Alternate gene names: NA
Gene position: 1815688-1815296 (Counterclockwise)
Preceding gene: 182682164
Following gene: 182682156
Centisome position: 71.61
GC content: 51.15
Gene sequence:
>393_bases ATGATGATGAGTTTCGCGCAAAGGTGCCGATCCCTCTATATAGTGTTTGCTCTTGGTTGTTTCTTTGTATGTTCTATCCC GGCTTTGGCTCAGGTGACATCGTCTGAATTGGAGGTTGCTGAGCAGGCGATTCAGCGTGCTACTCAGGCCAATGCGGATC AATACGCACCGAACCTGATCAATCAAGCACGTCAATTATTGATTCAAGCTCAGCGCGCGCTGTTGGATCGTGATCAGCGT AAACAGGGGCCACTGATTGCACAGCGTGCCGCTGCGGATGCAGATTTGGCGACCGCACGCAGTCAAGTAGCTATGTTCCA GGTTCAGCTGGAGCAGCGTAGGGCTGAGGTCATGCAGCTTCAGAATACTTTAGGCACCACGGAGGAAAAATAA
Upstream 100 bases:
>100_bases ACAGTAAGTTTTCTATGAATCTTGATACATCATCATTGCAAGCGTGCTGTTGGCTCCTGACAATGATGGGATTTAAGTCT TCTTGTTCATGAGTTTGCTA
Downstream 100 bases:
>100_bases TGATGTTGATCAAACCGACGTTGTTGTCTTGCGCTCTGGTCTTGGTGTTGATTCCTGTCGTCGCGTTGGCTGCCAAAGTT GATCCGGAGGTTGATGCGTT
Product: outer membran protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MMMSFAQRCRSLYIVFALGCFFVCSIPALAQVTSSELEVAEQAIQRATQANADQYAPNLINQARQLLIQAQRALLDRDQR KQGPLIAQRAAADADLATARSQVAMFQVQLEQRRAEVMQLQNTLGTTEEK
Sequences:
>Translated_130_residues MMMSFAQRCRSLYIVFALGCFFVCSIPALAQVTSSELEVAEQAIQRATQANADQYAPNLINQARQLLIQAQRALLDRDQR KQGPLIAQRAAADADLATARSQVAMFQVQLEQRRAEVMQLQNTLGTTEEK >Mature_130_residues MMMSFAQRCRSLYIVFALGCFFVCSIPALAQVTSSELEVAEQAIQRATQANADQYAPNLINQARQLLIQAQRALLDRDQR KQGPLIAQRAAADADLATARSQVAMFQVQLEQRRAEVMQLQNTLGTTEEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14503; Mature: 14503
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMMSFAQRCRSLYIVFALGCFFVCSIPALAQVTSSELEVAEQAIQRATQANADQYAPNLI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHH NQARQLLIQAQRALLDRDQRKQGPLIAQRAAADADLATARSQVAMFQVQLEQRRAEVMQL HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QNTLGTTEEK HHHHCCCCCC >Mature Secondary Structure MMMSFAQRCRSLYIVFALGCFFVCSIPALAQVTSSELEVAEQAIQRATQANADQYAPNLI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHH NQARQLLIQAQRALLDRDQRKQGPLIAQRAAADADLATARSQVAMFQVQLEQRRAEVMQL HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QNTLGTTEEK HHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA